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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.478742 (18 seq.)
>WENV180232956
OBCP01000042
[OBCP] synthetic metagenome; purchased from BEI Resources HM-276D
181864
181793
-
Arg
CCG
[ENA]
¢þ
>C181060796
CP022206
Bacillota
Streptococcus pyogenes GURSA1 [CP022206]
1175142
1175071
-
Arg
CCG
-
¡û
>C181205628
LS483315
Bacillota
Streptococcus pyogenes NCTC12059 [LS483315]
1086111
1086040
-
Arg
CCG
-
¡û
>C181207705
LS483347
Bacillota
Streptococcus pyogenes NCTC8324 [LS483347]
1176950
1176879
-
Arg
CCG
-
¡û
>C181208205
LS483355
Bacillota
Streptococcus pyogenes NCTC12067 [LS483355]
712021
712092
+
Arg
CCG
-
¡û
>C181209702
LS483379
Bacillota
Streptococcus pyogenes NCTC10874 [LS483379]
728160
728231
+
Arg
CCG
-
¡û
>C181210150
LS483386
Bacillota
Streptococcus pyogenes NCTC13742 [LS483386]
776966
777037
+
Arg
CCG
-
¡û
>C191075530
CP031617
Bacillota
Streptococcus pyogenes MGAS29409 [CP031617]
1156772
1156701
-
Arg
CCG
-
¡û
>C191075798
CP031621
Bacillota
Streptococcus pyogenes MGAS28746 [CP031621]
1116241
1116170
-
Arg
CCG
-
¡û
>C191093293
CP032666
Bacillota
Streptococcus pyogenes MGAS28085 [CP032666]
1114450
1114379
-
Arg
CCG
-
¡û
>C191112605
CP033815
Bacillota
Streptococcus pyogenes FDAARGOS_514 [CP033815]
1630318
1630389
+
Arg
CCG
-
¡û
>C191114909
CP033907
Bacillota
Streptococcus pyogenes Duke-Large [CP033907]
828394
828465
+
Arg
CCG
-
¡û
>C191142037
CP035438
Bacillota
Streptococcus pyogenes emm22.8 [CP035438]
1012014
1011943
-
Arg
CCG
-
¡û
>C191142477
CP035445
Bacillota
Streptococcus pyogenes emm92 [CP035445]
718126
718197
+
Arg
CCG
-
¡û
>W1910228181
FNMQ01000017
Bacillota
Streptococcus pyogenes ISR2 [FNMQ]
31555
31484
-
Arg
CCG
[ENA]
¡û
>W1911500619
OEIP01000011
Bacillota
Streptococcus pyogenes [OEIP]
342148
342077
-
Arg
CCG
[ENA]
¡û
>W1511349452
JRLI01000022
Bacillota
Streptococcus pyogenes MGAS2111 [JRLI]
68166
68237
+
Arg
CCG
[ENA]
¡û
>W1511354717
JRQN01000001
Bacillota
Streptococcus uberis CAIM 1894 [JRQN]
199771
199698
-
Arg
CCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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