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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.480385 (83 seq.)
>W1710872044
LMLR01000012
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
343343
343416
+
Gly
CCC
[ENA]
¡û
>W1710875370
LMOI01000018
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
608222
608295
+
Gly
CCC
[ENA]
¡û
>W1710875500
LMOL01000002
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
181163
181236
+
Gly
CCC
[ENA]
¡û
>W1710876314
LMPC01000030
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
114341
114414
+
Gly
CCC
[ENA]
¡û
>W1710880270
LMSF01000023
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
390692
390763
+
Gly
CCC
[ENA]
¡û
>W1710880373
LMSH01000002
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
25606
25533
-
Gly
CCC
[ENA]
¡û
>W1710880397
LMSI01000006
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
88382
88311
-
Gly
CCC
[ENA]
¡û
>W1710909444
LNQM01000003
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
474272
474345
+
Gly
CCC
[ENA]
¡û
>W1710916124
LNUT01000005
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
28422
28349
-
Gly
CCC
[ENA]
¡û
>W1710995753
LQAP01000011
Actinomycetota
Arthrobacter sp. B6 [LQAP]
39436
39363
-
Gly
CCC
[ENA]
¡û
>W131089946
AOFD01000031
Actinomycetota
Arthrobacter nitrophenolicus SJCon [AOFD]
19319
19392
+
Gly
CCC
[ENA]
¡û
>W131172051
ARGQ01000035
Actinomycetota
Arthrobacter sp. 135MFCol5.1 [ARGQ]
60111
60040
-
Gly
CCC
[ENA]
¡û
>W131172175
ARGS01000047
Actinomycetota
Arthrobacter sp. 162MFSha1.1 [ARGS]
65325
65254
-
Gly
CCC
[ENA]
¡û
>W131172220
ARGT01000024
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
42668
42595
-
Gly
CCC
[ENA]
¡û
>W1711184069
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
4213576
4213649
+
Gly
CCC
[ENA]
¡û
>W131237715
AUPJ01000224
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
14427
14500
+
Gly
CCC
[ENA]
¡û
>W1711768812
MVDG01000026
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
27843
27770
-
Gly
CCC
[ENA]
¡û
>W1711853249
MYFE01000543
Actinomycetota
Arthrobacter globiformis [MYFE]
2461
2534
+
Gly
CCC
[ENA]
¡û
>C171040584
CP015732
Actinomycetota
Arthrobacter sp. U41 [CP015732]
948040
948113
+
Gly
CCC
-
¡û
>C171092009
CP019304
Actinomycetota
Arthrobacter sp. QXT-31 [CP019304]
2596185
2596112
-
Gly
CCC
-
¡û
>C001007
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
4364506
4364579
+
Gly
CCC
[Ensembl]
¡û
>WENV181191192
OEPS010035236
[OEPS] soil metagenome; soil
713
786
+
Gly
CCC
[ENA]
¢þ
>W08008057
ABKU01000003
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [ABKU]
49113
49186
+
Gly
CCC
[ENA]
¡û
>WENV181365303
OFPN01000439
[OFPN] sediment metagenome; Lake sediment
307
234
-
Gly
CCC
[ENA]
¢þ
>W141213503
AZSB01000004
Actinomycetota
Arthrobacter sp. I3 [AZSB]
521
448
-
Gly
CCC
[ENA]
¡û
>W141246946
CAQI01000024
Actinomycetota
Pseudarthrobacter siccitolerans [CAQI]
62105
62032
-
Gly
CCC
[ENA]
¡û
>C183000013
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
3564188
3564261
+
Gly
CCC
-
¡û
>C181134221
CP026514
Actinomycetota
Arthrobacter sp. PGP41 [CP026514]
4007264
4007337
+
Gly
CCC
-
¡û
>C193003079
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
185405
185478
+
Gly
CCC
-
¡û
>C191164652
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
957197
957124
-
Gly
CCC
-
¡û
>C191174058
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
5247096
5247169
+
Gly
CCC
-
¡û
>C191188252
CP041187
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502771 [CP041187]
1444462
1444389
-
Gly
CCC
-
¡û
>C191188529
CP041198
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502770 [CP041198]
3459741
3459814
+
Gly
CCC
-
¡û
>W141565208
JIBJ01000008
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
214384
214457
+
Gly
CCC
[ENA]
¡û
>W09102068
AAHG01000017
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
28697
28770
+
Gly
CCC
[ENA]
¡û
>W141702017
JMLE01000010
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
121299
121372
+
Gly
CCC
[ENA]
¡û
>C09100271
CP001341
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [CP001341]
4076047
4076120
+
Gly
CCC
[Ensembl]
¡û
>W1911532748
OIVI01000350
Actinomycetota
Arthrobacter alpinus [OIVI]
28132
28059
-
Gly
CCC
[ENA]
¡û
>W1810167249
PJII01000004
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
295118
295191
+
Gly
CCC
[ENA]
¡û
>W1810167339
PJIK01000003
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
365185
365258
+
Gly
CCC
[ENA]
¡û
>W1810167406
PJIL01000011
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
132919
132992
+
Gly
CCC
[ENA]
¡û
>W1810167899
PJIV01000012
Actinomycetota
Arthrobacter sp. 9E14 [PJIV]
38346
38273
-
Gly
CCC
[ENA]
¡û
>W1810171981
PJMB01000010
Actinomycetota
Arthrobacter sp. AFG7.2 [PJMB]
30457
30384
-
Gly
CCC
[ENA]
¡û
>W1810172026
PJMC01000013
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
27671
27598
-
Gly
CCC
[ENA]
¡û
>W1810296132
PTJB01000001
Actinomycetota
Arthrobacter sp. B3 [PTJB]
531040
531113
+
Gly
CCC
[ENA]
¡û
>W1810424186
PYUI01000018
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
53546
53619
+
Gly
CCC
[ENA]
¡û
>W1810474964
QAIQ01000299
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
5256
5183
-
Gly
CCC
[ENA]
¡û
>W1810569976
QEHL01000012
Actinomycetota
Pseudarthrobacter sp. AG30 [QEHL]
122542
122471
-
Gly
CCC
[ENA]
¡û
>W1810677270
QKMO01000012
Actinomycetota
Arthrobacter sp. RC1.1 241 [QKMO]
23258
23331
+
Gly
CCC
[ENA]
¡û
>W1810695542
QLNP01000017
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
126808
126881
+
Gly
CCC
[ENA]
¡û
>W1810789430
QRGQ01000002
Actinomycetota
Arthrobacter sp. RT-1 [QRGQ]
47888
47815
-
Gly
CCC
[ENA]
¡û
>W1830003288
PJIW01000020
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
86015
86088
+
Gly
CCC
[ENA]
¡û
>W1830013862
QMKP01000009
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
32902
32829
-
Gly
CCC
[ENA]
¡û
>W1510018546
BBUE01000345
Actinomycetota
Arthrobacter sp. Hiyo6 [BBUE]
1373
1446
+
Gly
CCC
[ENA]
¡û
>C11101005
CP002379
Actinomycetota
Pseudarthrobacter phenanthrenivorans Sphe3 [CP002379]
3966995
3967068
+
Gly
CCC
[Ensembl]
¡û
>W1511489630
JWTB01000025
Actinomycetota
Pseudarthrobacter phenanthrenivorans SWC37 [JWTB]
72402
72475
+
Gly
CCC
[ENA]
¡û
>W1511523749
JYCN01000028
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
189902
189975
+
Gly
CCC
[ENA]
¡û
>W1511551647
JZTW01000021
Actinomycetota
Pseudarthrobacter chlorophenolicus Mor30.16 [JZTW]
32586
32513
-
Gly
CCC
[ENA]
¡û
>W1511685683
LFQH01000036
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
20575
20648
+
Gly
CCC
[ENA]
¡û
>W121123817
BAEG01000073
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
168752
168825
+
Gly
CCC
[ENA]
¡û
>W1610515426
FMAZ01000003
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
474272
474345
+
Gly
CCC
[ENA]
¡û
>W1610734390
LMLR01000012
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
343343
343416
+
Gly
CCC
[ENA]
¡û
>W1610737716
LMOI01000018
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
608222
608295
+
Gly
CCC
[ENA]
¡û
>W1610737846
LMOL01000002
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
181163
181236
+
Gly
CCC
[ENA]
¡û
>W1610738660
LMPC01000030
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
114341
114414
+
Gly
CCC
[ENA]
¡û
>W1610742616
LMSF01000023
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
390692
390763
+
Gly
CCC
[ENA]
¡û
>W1610742719
LMSH01000002
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
25606
25533
-
Gly
CCC
[ENA]
¡û
>W1610742743
LMSI01000006
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
88382
88311
-
Gly
CCC
[ENA]
¡û
>W1610767803
LNQM01000003
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
474272
474345
+
Gly
CCC
[ENA]
¡û
>W1610774363
LNUT01000005
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
28422
28349
-
Gly
CCC
[ENA]
¡û
>W1610850410
LQAP01000011
Actinomycetota
Arthrobacter sp. B6 [LQAP]
39436
39363
-
Gly
CCC
[ENA]
¡û
>W1610989951
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
4213576
4213649
+
Gly
CCC
[ENA]
¡û
>W1630013544
LMSG01000001
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
915707
915780
+
Gly
CCC
[ENA]
¡û
>W1730015966
LMSG01000001
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
915707
915780
+
Gly
CCC
[ENA]
¡û
>W1710501116
FMAZ01000003
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
474272
474345
+
Gly
CCC
[ENA]
¡û
>W1710521090
FNGC01000011
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
3647
3574
-
Gly
CCC
[ENA]
¡û
>W1710521128
FNGD01000006
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
50935
50862
-
Gly
CCC
[ENA]
¡û
>W1710525676
FNJS01000021
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
37547
37620
+
Gly
CCC
[ENA]
¡û
>W1710527688
FNLE01000003
Actinomycetota
Pseudarthrobacter chlorophenolicus [FNLE]
1111010
1110937
-
Gly
CCC
[ENA]
¡û
>W1710550094
FOEZ01000014
Actinomycetota
Arthrobacter sp. OV608 [FOEZ]
69157
69084
-
Gly
CCC
[ENA]
¡û
>W1710577605
FPAY01000001
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
1162561
1162634
+
Gly
CCC
[ENA]
¡û
>W1710603507
FUZD01000003
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
42246
42173
-
Gly
CCC
[ENA]
¡û
>W1710605008
FVZL01000001
Actinomycetota
Arthrobacter sp. P2b [FVZL]
471087
471160
+
Gly
CCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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