tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.480946 (137 seq.)
>W1710785358 LJHU01000020 Alphaproteobacteria Brevundimonas sp. AAP58 [LJHU] 4417 4344 - Gln TTG [ENA] ¡û
>W1710862007 LMEB01000009 Alphaproteobacteria Brevundimonas sp. Root1279 [LMEB] 165697 165770 + Gln TTG [ENA] ¡û
>W1710863821 LMFL01000001 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 418471 418544 + Gln TTG [ENA] ¡û
>W1710863834 LMFL01000005 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 73460 73533 + Gln TTG [ENA] ¡û
>W1710863835 LMFL01000005 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 73568 73641 + Gln TTG [ENA] ¡û
>W1710865543 LMGT01000004 Alphaproteobacteria Brevundimonas sp. Root608 [LMGT] 293297 293224 - Gln TTG [ENA] ¡û
>W1710873823 LMNC01000002 Alphaproteobacteria Brevundimonas sp. Leaf280 [LMNC] 426604 426531 - Gln TTG [ENA] ¡û
>W1710876089 LMOY01000001 Alphaproteobacteria Brevundimonas sp. Leaf168 [LMOY] 863066 863139 + Gln TTG [ENA] ¡û
>W1710877306 LMPZ01000002 Alphaproteobacteria Brevundimonas sp. Leaf363 [LMPZ] 1407473 1407400 - Gln TTG [ENA] ¡û
>W1710899443 LNIY01000108 Alphaproteobacteria Caulobacter vibrioides [LNIY] 29904 29831 - Gln TTG [ENA] ¡û
>W131052418 AMYY01000007 Alphaproteobacteria alpha proteobacterium L41A [AMYY] 84321 84394 + Gln TTG [ENA] ¡û
>W131160343 AQWM01000008 Alphaproteobacteria Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 [AQWM] 1631 1558 - Gln TTG [ENA] ¡û
>W131218262 ATXN01000003 Alphaproteobacteria Brevundimonas naejangsanensis DSM 23858 [ATXN] 310383 310456 + Gln TTG [ENA] ¡û
>W1711408011 MGLN01000138 Alphaproteobacteria Caulobacterales bacterium RIFOXYB1_FULL_67_16 [MGLN] 17069 16996 - Gln TTG [ENA] ¡û
>W1711501729 MKRY01000106 Alphaproteobacteria Brevundimonas sp. 67-6 [MKRY] 6757 6684 - Gln TTG [ENA] ¡û
>W1711718097 MTHE01000001 Alphaproteobacteria Brevundimonas sp. ZS04 [MTHE] 228202 228129 - Gln TTG [ENA] ¡û
>W1712106177 NIVP01000004 Alphaproteobacteria Brevundimonas diminuta [NIVP] 137532 137459 - Gln TTG [ENA] ¡û
>C171094871 CP019508 Alphaproteobacteria Brevundimonas sp. LM2 [CP019508] 2246181 2246108 - Gln TTG - ¡û
>WENV180013888 FPIC01007296 [FPIC] soil metagenome; Soil 296 369 + Gln TTG [ENA] ¢þ
>WENV180016290 FSUP01000413 [FSUP] metagenome; soil 229 156 - Gln TTG [ENA] ¢þ
>WENV180016468 FSVF01000100 [FSVF] metagenome; soil 2589 2516 - Gln TTG [ENA] ¢þ
>WENV180016545 FSVH01000108 [FSVH] metagenome; soil 6742 6815 + Gln TTG [ENA] ¢þ
>WENV180019618 FTCE01000175 [FTCE] metagenome; soil 2607 2534 - Gln TTG [ENA] ¢þ
>WENV180020534 FTCZ01005643 [FTCZ] metagenome; soil 31966 31893 - Gln TTG [ENA] ¢þ
>WENV180020795 FTDB01001974 [FTDB] metagenome; soil 5354 5427 + Gln TTG [ENA] ¢þ
>WENV180020816 FTDB01002303 [FTDB] metagenome; soil 37884 37811 - Gln TTG [ENA] ¢þ
>WENV180021006 FTDJ01000768 [FTDJ] metagenome; soil 2488 2561 + Gln TTG [ENA] ¢þ
>WENV180024753 FTIJ01004304 [FTIJ] metagenome; soil 858 785 - Gln TTG [ENA] ¢þ
>WENV180027634 FTIZ01013219 [FTIZ] metagenome; soil 1609 1536 - Gln TTG [ENA] ¢þ
>WENV180027858 FTIZ01172351 [FTIZ] metagenome; soil 3666 3593 - Gln TTG [ENA] ¢þ
>WENV180028138 FTIZ01752008 [FTIZ] metagenome; soil 4282 4355 + Gln TTG [ENA] ¢þ
>WENV180028554 FTJE01007853 [FTJE] metagenome; soil 684 611 - Gln TTG [ENA] ¢þ
>WENV180028813 FTJH01004167 [FTJH] metagenome; soil 125 52 - Gln TTG [ENA] ¢þ
>WENV180028974 FTJI01000657 [FTJI] metagenome; soil 4163 4236 + Gln TTG [ENA] ¢þ
>WENV180029322 FTJI01618164 [FTJI] metagenome; soil 940 867 - Gln TTG [ENA] ¢þ
>WENV180033801 FTKL01252601 [FTKL] metagenome; soil 262 189 - Gln TTG [ENA] ¢þ
>WENV180033888 FTKM01000007 [FTKM] metagenome; soil 297377 297450 + Gln TTG [ENA] ¢þ
>WENV180034499 FTKR01000656 [FTKR] metagenome; soil 4163 4236 + Gln TTG [ENA] ¢þ
>WENV180034850 FTKR01680554 [FTKR] metagenome; soil 940 867 - Gln TTG [ENA] ¢þ
>WENV180035283 FTKT01074462 [FTKT] metagenome; soil 679 606 - Gln TTG [ENA] ¢þ
>W141043007 AMFA01000076 Alphaproteobacteria Brevundimonas diminuta 470-4 [AMFA] 2725 2652 - Gln TTG [ENA] ¡û
>W08010840 ABRU01000042 Alphaproteobacteria Brevundimonas sp. BAL3 [ABRU] 7504 7434 - Gln TTG [ENA] ¡û
>WENV181227455 OFDN01010992 [OFDN] hot springs metagenome; Water 858 785 - Gln TTG [ENA] ¢þ
>WENV181371079 OFQU01017546 [OFQU] wastewater metagenome; Exp Tend CN 90WW 297 224 - Gln TTG [ENA] ¢þ
>WENV181371510 OFQV01010763 [OFQV] wastewater metagenome; WWTP Cannobio (Effluent) 630 557 - Gln TTG [ENA] ¢þ
>WENV181384404 OFRI01000760 [OFRI] wastewater metagenome; Exp Tend VB 90WW 2103 2176 + Gln TTG [ENA] ¢þ
>W141136699 AWGB01000048 Alphaproteobacteria Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 [AWGB] 1372 1299 - Gln TTG [ENA] ¡û
>W141136825 AWGE01000011 Alphaproteobacteria Asticcacaulis sp. AC466 [AWGE] 32445 32518 + Gln TTG [ENA] ¡û
>W141136854 AWGF01000002 Alphaproteobacteria Asticcacaulis sp. YBE204 [AWGF] 120607 120534 - Gln TTG [ENA] ¡û
>WENV181402207 OFTY01000236 [OFTY] sludge metagenome; sludge 26314 26241 - Gln TTG [ENA] ¢þ
>WENV181732242 OGQD01018510 [OGQD] human gut metagenome; faeces 687 614 - Gln TTG [ENA] ¢þ
>W141230488 BATC01000093 Alphaproteobacteria Brevundimonas abyssalis TAR-001 [BATC] 268 341 + Gln TTG [ENA] ¡û
>C08002339 CP000927 Alphaproteobacteria Caulobacter sp. K31 [CP000927] 1400912 1400985 + Gln TTG [Ensembl] ¡û
>WENV183696993 OUNJ010000161 [OUNJ] metagenome; soil 11407 11334 - Gln TTG [ENA] ¢þ
>WENV183697064 OUNJ010001702 [OUNJ] metagenome; soil 14 87 + Gln TTG [ENA] ¢þ
>WENV183697264 OUNJ010200431 [OUNJ] metagenome; soil 1546 1619 + Gln TTG [ENA] ¢þ
>WENV183727508 PJTP01000009 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 236100 236173 + Gln TTG [ENA] ¢þ
>WENV183728322 PJTQ01000015 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 347190 347117 - Gln TTG [ENA] ¢þ
>WENV183728340 PJTQ01000020 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 2082 2009 - Gln TTG [ENA] ¢þ
>WENV183730890 PJTS01001795 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 5386 5313 - Gln TTG [ENA] ¢þ
>WENV183733480 PJTY01002655 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 571 644 + Gln TTG [ENA] ¢þ
>WENV183735560 PJUB01000047 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 116449 116522 + Gln TTG [ENA] ¢þ
>WENV183738912 PJUE01000429 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 24334 24407 + Gln TTG [ENA] ¢þ
>WENV183739789 PJUF01000012 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 2082 2009 - Gln TTG [ENA] ¢þ
>WENV183740155 PJUF01000502 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 5898 5971 + Gln TTG [ENA] ¢þ
>WENV170011384 APMI01062374 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 653 726 + Gln TTG [ENA] ¢þ
>WENV170192811 CEPG01014097 [CEPG] marine metagenome genome assembly TARA_046_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1731 1658 - Gln TTG [ENA] ¢þ
>WENV170200936 CEPP01016016 [CEPP] marine metagenome genome assembly TARA_042_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 50454 50381 - Gln TTG [ENA] ¢þ
>WENV170574066 FLYM01003141 [FLYM] hot springs metagenome; Sediment 235 308 + Gln TTG [ENA] ¢þ
>WENV170574364 FLYM01029701 [FLYM] hot springs metagenome; Sediment 1130 1203 + Gln TTG [ENA] ¢þ
>WENV170574562 FLYM01060303 [FLYM] hot springs metagenome; Sediment 2430 2503 + Gln TTG [ENA] ¢þ
>WENV170646007 JQGF01006261 [JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each 912 985 + Gln TTG [ENA] ¢þ
>WENV170646009 JQGF01006263 [JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each 205 278 + Gln TTG [ENA] ¢þ
>WENV170658932 JUGB01000514 [JUGB] scorpion gut metagenome; ten pooled guts of food-deprived Vaejovis mexicanus smith and Centruroides limpidus 1854 1781 - Gln TTG [ENA] ¢þ
>WENV170670571 LAHT01051930 [LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over 67 140 + Gln TTG [ENA] ¢þ
>WENV170680689 LFEF01010618 [LFEF] freshwater metagenome; waterbloom 403 330 - Gln TTG [ENA] ¢þ
>WENV170711607 LNFM01006033 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 6315 6388 + Gln TTG [ENA] ¢þ
>WENV170711927 LNFM01008440 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5489 5562 + Gln TTG [ENA] ¢þ
>WENV170784219 MCHG01000147 [MCHG] permafrost metagenome; enrichment culture inoculated with soil; incubated with H2/CO2 at 20 degrees celsius and 21453 21380 - Gln TTG [ENA] ¢þ
>WENV170829123 MDSZ01003262 [MDSZ] marine metagenome; seawater 69519 69446 - Gln TTG [ENA] ¢þ
>C181056241 CP022048 Alphaproteobacteria Brevundimonas vesicularis FDAARGOS_289 [CP022048] 3250467 3250540 + Gln TTG - ¡û
>C191005618 AP018827 Alphaproteobacteria Asticcacaulis excentricus M6 [AP018827, AP018828] 605353 605426 + Gln TTG - ¡û
>C191093998 CP032707 Alphaproteobacteria Brevundimonas naejangsanensis BRV3 [CP032707] 2394408 2394481 + Gln TTG - ¡û
>C191134446 CP035093 Alphaproteobacteria Brevundimonas diminuta [CP035093] 2593864 2593791 - Gln TTG - ¡û
>C191157403 CP038027 Alphaproteobacteria Brevundimonas naejangsanensis FS1091 [CP038027] 1309515 1309442 - Gln TTG - ¡û
>C191159617 CP038440 Alphaproteobacteria Brevundimonas sp. MF30-B [CP038440] 1711250 1711323 + Gln TTG - ¡û
>C191166124 CP039435 Alphaproteobacteria Brevundimonas sp. SGAir0440 [CP039435] 2019607 2019534 - Gln TTG - ¡û
>C191189137 CP041243 Alphaproteobacteria Brevundimonas sp. M20 [CP041243] 2087337 2087264 - Gln TTG - ¡û
>C191220420 LR588407 Alphaproteobacteria Brevundimonas vancanneytii NCTC9239 [LR588407] 1434251 1434324 + Gln TTG - ¡û
>W141551926 JHOF01000018 Alphaproteobacteria Brevundimonas naejangsanensis [JHOF] 583010 582937 - Gln TTG [ENA] ¡û
>W141712432 JMQR01000015 Alphaproteobacteria Brevundimonas sp. EAKA [JMQR] 2167 2240 + Gln TTG [ENA] ¡û
>W09133865 ACQR01000014 Alphaproteobacteria Asticcacaulis excentricus CB 48 [ACQR] 46038 46111 + Gln TTG [ENA] ¡û
>W141731217 JNIX01000007 Alphaproteobacteria Brevundimonas bacteroides DSM 4726 [JNIX] 470295 470368 + Gln TTG [ENA] ¡û
>W1910182687 BJNC01000009 Alphaproteobacteria Brevundimonas diminuta NBRC 14213 [BJNC] 78119 78192 + Gln TTG [ENA] ¡û
>W1910374330 FUIE01000049 Alphaproteobacteria Brevundimonas diminuta 3F5N [FUIE] 70229 70302 + Gln TTG [ENA] ¡û
>W1910725255 MGLK01000012 Alphaproteobacteria Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19 [MGLK] 66170 66243 + Gln TTG [ENA] ¡û
>W1910744281 MIAJ01000047 Alphaproteobacteria Sphingomonadales bacterium RIFCSPHIGHO2_01_FULL_65_20 [MIAJ] 16430 16357 - Gln TTG [ENA] ¡û
>W1911566737 PCPB01000002 Alphaproteobacteria Brevundimonas sp. MYb52 [PCPB] 289871 289944 + Gln TTG [ENA] ¡û
>W1911566947 PCPF01000002 Alphaproteobacteria Brevundimonas sp. MYb46 [PCPF] 109587 109514 - Gln TTG [ENA] ¡û
>W1911567193 PCPK01000004 Alphaproteobacteria Brevundimonas sp. MYb33 [PCPK] 23368 23295 - Gln TTG [ENA] ¡û
>W1911567292 PCPM01000011 Alphaproteobacteria Brevundimonas sp. MYb31 [PCPM] 95016 94943 - Gln TTG [ENA] ¡û
>W1911567400 PCPO01000010 Alphaproteobacteria Brevundimonas sp. MYb27 [PCPO] 95016 94943 - Gln TTG [ENA] ¡û
>W1911737839 QTTA01000010 Alphaproteobacteria Brevundimonas halotolerans MCS24 [QTTA] 226067 226140 + Gln TTG [ENA] ¡û
>W1911738150 QUOQ01000003 Alphaproteobacteria Brevundimonas lutea NS26 [QUOQ] 373198 373125 - Gln TTG [ENA] ¡û
>W1911760332 QWTZ01000002 Alphaproteobacteria Brevundimonas sp. LPMIX5 [QWTZ] 587772 587699 - Gln TTG [ENA] ¡û
>W1810000958 BEWU01000007 Alphaproteobacteria Brevundimonas denitrificans TAR-002 [BEWU] 5703 5630 - Gln TTG [ENA] ¡û
>W1810503518 QBKE01000005 Alphaproteobacteria Asticcacaulis sp. CF398 [QBKE] 115337 115410 + Gln TTG [ENA] ¡û
>W1810693153 QLLC01000006 Alphaproteobacteria Brevundimonas bullata HAMBI_262 [QLLC] 15812 15739 - Gln TTG [ENA] ¡û
>W10109844 ADBM01000002 Alphaproteobacteria Brevundimonas subvibrioides ATCC 15264 [ADBM] 156652 156579 - Gln TTG [ENA] ¡û
>C10102219 CP002102 Alphaproteobacteria Brevundimonas subvibrioides ATCC 15264 [CP002102] 2489250 2489177 - Gln TTG [Ensembl] ¡û
>C11100673 CP002395 Alphaproteobacteria Asticcacaulis excentricus CB 48 [CP002395, CP002396] 1334457 1334530 + Gln TTG [Ensembl] ¡û
>W11112281 ADBM01000002 Alphaproteobacteria Brevundimonas subvibrioides ATCC 15264 [ADBM] 156652 156579 - Gln TTG [ENA] ¡û
>W11123434 ADUI01000118 Alphaproteobacteria Brevundimonas diminuta ATCC 11568 [ADUI] 55842 55769 - Gln TTG [ENA] ¡û
>W1511489449 JWSY01000001 Alphaproteobacteria Brevundimonas nasdae TPW30 [JWSY] 120781 120854 + Gln TTG [ENA] ¡û
>W1511547876 JZRG01000012 Alphaproteobacteria Brevundimonas sp. KM4 [JZRG] 120123 120196 + Gln TTG [ENA] ¡û
>W1511596056 LBNT01000005 Alphaproteobacteria Brevundimonas diminuta XGC1 [LBNT] 104874 104801 - Gln TTG [ENA] ¡û
>C161047041 CP012897 Alphaproteobacteria Brevundimonas sp. DS20 [CP012897] 2170428 2170501 + Gln TTG [Ensembl] ¡û
>C161049362 CP013002 Alphaproteobacteria Caulobacter henricii CB4 [CP013002] 2800772 2800699 - Gln TTG [Ensembl] ¡û
>C161089096 CP015511 Alphaproteobacteria Brevundimonas sp. GW460-12-10-14-LB2 [CP015511] 1049400 1049473 + Gln TTG [Ensembl] ¡û
>C161089806 CP015614 Alphaproteobacteria Brevundimonas naejangsanensis B1 [CP015614] 689685 689758 + Gln TTG [Ensembl] ¡û
>W1610074211 BCWM01000004 Alphaproteobacteria Brevundimonas vesicularis NBRC 12165 [BCWM] 94365 94438 + Gln TTG [ENA] ¡û
>W1610649164 LJHU01000020 Alphaproteobacteria Brevundimonas sp. AAP58 [LJHU] 4417 4344 - Gln TTG [ENA] ¡û
>W1610724353 LMEB01000009 Alphaproteobacteria Brevundimonas sp. Root1279 [LMEB] 165697 165770 + Gln TTG [ENA] ¡û
>W1610726167 LMFL01000001 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 418471 418544 + Gln TTG [ENA] ¡û
>W1610726180 LMFL01000005 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 73460 73533 + Gln TTG [ENA] ¡û
>W1610726181 LMFL01000005 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 73568 73641 + Gln TTG [ENA] ¡û
>W1610727889 LMGT01000004 Alphaproteobacteria Brevundimonas sp. Root608 [LMGT] 293297 293224 - Gln TTG [ENA] ¡û
>W1610736169 LMNC01000002 Alphaproteobacteria Brevundimonas sp. Leaf280 [LMNC] 426604 426531 - Gln TTG [ENA] ¡û
>W1610738435 LMOY01000001 Alphaproteobacteria Brevundimonas sp. Leaf168 [LMOY] 863066 863139 + Gln TTG [ENA] ¡û
>W1610739652 LMPZ01000002 Alphaproteobacteria Brevundimonas sp. Leaf363 [LMPZ] 1407473 1407400 - Gln TTG [ENA] ¡û
>W1610759846 LNIY01000108 Alphaproteobacteria Caulobacter vibrioides [LNIY] 29904 29831 - Gln TTG [ENA] ¡û
>WENV081325 ABEF01042786 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 1812 1887 + Gln TTG [ENA]
>W1710071329 BCWM01000004 Alphaproteobacteria Brevundimonas vesicularis NBRC 12165 [BCWM] 94365 94438 + Gln TTG [ENA] ¡û
>W1710084597 BDMM01000001 Alphaproteobacteria Brevundimonas sp. SH203 [BDMM] 118402 118475 + Gln TTG [ENA] ¡û
>W1710505466 FMTS01000001 Alphaproteobacteria Asticcacaulis taihuensis [FMTS] 539481 539408 - Gln TTG [ENA] ¡û
>W1710527014 FNKT01000001 Alphaproteobacteria Brevundimonas sp. 374 [FNKT] 465402 465475 + Gln TTG [ENA] ¡û
>W1710576185 FOZV01000004 Alphaproteobacteria Brevundimonas viscosa [FOZV] 138851 138924 + Gln TTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK