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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.482902 (216 seq.)
>W1710869774
LMJZ01000012
Alphaproteobacteria
Sphingomonas sp. Leaf5 [LMJZ]
122245
122172
-
Gly
TCC
[ENA]
¡û
>W1710869926
LMKC01000002
Alphaproteobacteria
Sphingomonas sp. Leaf9 [LMKC]
202766
202693
-
Gly
TCC
[ENA]
¡û
>W1710870111
LMKG01000002
Alphaproteobacteria
Sphingomonas sp. Leaf11 [LMKG]
202710
202637
-
Gly
TCC
[ENA]
¡û
>W1710870158
LMKH01000012
Alphaproteobacteria
Sphingomonas sp. Leaf208 [LMKH]
385550
385477
-
Gly
TCC
[ENA]
¡û
>W1710870443
LMKN01000001
Alphaproteobacteria
Sphingomonas sp. Leaf20 [LMKN]
1022869
1022942
+
Gly
TCC
[ENA]
¡û
>W1710870549
LMKP01000017
Alphaproteobacteria
Sphingomonas sp. Leaf22 [LMKP]
24696
24769
+
Gly
TCC
[ENA]
¡û
>W1710870639
LMKR01000002
Alphaproteobacteria
Sphingomonas sp. Leaf23 [LMKR]
782184
782111
-
Gly
TCC
[ENA]
¡û
>W1710870694
LMKS01000012
Alphaproteobacteria
Sphingomonas sp. Leaf24 [LMKS]
122246
122173
-
Gly
TCC
[ENA]
¡û
>W1710870749
LMKT01000023
Alphaproteobacteria
Sphingomonas sp. Leaf226 [LMKT]
685145
685072
-
Gly
TCC
[ENA]
¡û
>W1710870795
LMKU01000023
Alphaproteobacteria
Sphingomonas sp. Leaf25 [LMKU]
69190
69117
-
Gly
TCC
[ENA]
¡û
>W1710870882
LMKW01000008
Alphaproteobacteria
Sphingomonas sp. Leaf230 [LMKW]
589325
589252
-
Gly
TCC
[ENA]
¡û
>W1710870948
LMKX01000008
Alphaproteobacteria
Sphingomonas sp. Leaf28 [LMKX]
212348
212275
-
Gly
TCC
[ENA]
¡û
>W1710871159
LMLC01000001
Alphaproteobacteria
Sphingomonas sp. Leaf34 [LMLC]
642694
642767
+
Gly
TCC
[ENA]
¡û
>W1710871237
LMLD01000011
Alphaproteobacteria
Sphingomonas sp. Leaf38 [LMLD]
510831
510758
-
Gly
TCC
[ENA]
¡û
>W1710871327
LMLF01000007
Alphaproteobacteria
Sphingomonas sp. Leaf42 [LMLF]
309096
309169
+
Gly
TCC
[ENA]
¡û
>W1710871829
LMLN01000003
Alphaproteobacteria
Sphingomonas sp. Leaf62 [LMLN]
57374
57447
+
Gly
TCC
[ENA]
¡û
>W1710871956
LMLP01000023
Alphaproteobacteria
Sphingomonas sp. Leaf67 [LMLP]
204428
204355
-
Gly
TCC
[ENA]
¡û
>W1710872092
LMLS01000003
Alphaproteobacteria
Sphingomonas sp. Leaf231 [LMLS]
77647
77720
+
Gly
TCC
[ENA]
¡û
>W1710878005
LMQO01000004
Alphaproteobacteria
Sphingomonas sp. Leaf407 [LMQO]
309133
309206
+
Gly
TCC
[ENA]
¡û
>W1710878056
LMQP01000003
Alphaproteobacteria
Sphingomonas sp. Leaf412 [LMQP]
92626
92553
-
Gly
TCC
[ENA]
¡û
>W1710894017
LNFI01000003
Alphaproteobacteria
Sphingomonadales bacterium Ga0077557 [LNFI]
48802
48875
+
Gly
TCC
[ENA]
¡û
>W1710907348
LNOS01000051
Alphaproteobacteria
Sphingomonas sp. WG [LNOS]
18486
18559
+
Gly
TCC
[ENA]
¡û
>W1710926977
LOEV01000184
Alphaproteobacteria
Alphaproteobacteria bacterium BRH_c36 [LOEV]
396
323
-
Gly
TCC
[ENA]
¡û
>W1711074115
LSJF01000429
Alphaproteobacteria
Sphingomonas sp. CCH9-H8 [LSJF]
2357
2284
-
Gly
TCC
[ENA]
¡û
>W1711074401
LSJM01000310
Alphaproteobacteria
Sphingomonas sp. CCH9-E2 [LSJM]
12743
12816
+
Gly
TCC
[ENA]
¡û
>W1711074456
LSJO01000194
Alphaproteobacteria
Sphingomonas sp. CCH9-F2 [LSJO]
824
751
-
Gly
TCC
[ENA]
¡û
>W1711227817
LXVY01000004
Alphaproteobacteria
Sphingomonas sp. TDK1 [LXVY]
88430
88503
+
Gly
TCC
[ENA]
¡û
>W131213820
ATTI01000001
Alphaproteobacteria
Sphingomonas phyllosphaerae 5.2 [ATTI]
292421
292494
+
Gly
TCC
[ENA]
¡û
>W131219279
ATYK01000003
Alphaproteobacteria
Sphingomonas phyllosphaerae FA2 [ATYK]
406746
406819
+
Gly
TCC
[ENA]
¡û
>W1711353106
MDDS01000003
Alphaproteobacteria
Sphingomonas turrisvirgatae MCT13 [MDDS]
57348
57275
-
Gly
TCC
[ENA]
¡û
>W1711387013
MEGC01000030
Alphaproteobacteria
Novosphingobium sp. SCN 63-17 [MEGC]
39564
39637
+
Gly
TCC
[ENA]
¡û
>C171030415
CP014168
Alphaproteobacteria
Sphingomonas panacis DCY99 [CP014168]
2086511
2086438
-
Gly
TCC
-
¡û
>C171084768
CP018820
Alphaproteobacteria
Sphingomonas koreensis ABOJV [CP018820]
1172800
1172873
+
Gly
TCC
-
¡û
>C171095065
CP019511
Alphaproteobacteria
Sphingomonas sp. LM7 [CP019511]
3804178
3804105
-
Gly
TCC
-
¡û
>WENV180027060
FTIV01165494
[FTIV] metagenome; soil
1
74
+
Gly
TCC
[ENA]
¢þ
>W141043026
AMFA01000127
Alphaproteobacteria
Brevundimonas diminuta 470-4 [AMFA]
164
91
-
Gly
TCC
[ENA]
¡û
>WENV181145380
OEHO01286057
[OEHO] metagenome; unknown
138
65
-
Gly
TCC
[ENA]
¢þ
>WENV181222548
OFDC01000007
[OFDC] hot springs metagenome; Water
72810
72883
+
Gly
TCC
[ENA]
¢þ
>WENV181227948
OFDN01085060
[OFDN] hot springs metagenome; Water
736
663
-
Gly
TCC
[ENA]
¢þ
>WENV181379847
OFRD01011733
[OFRD] wastewater metagenome; Exp Tend CN 100WW
1649
1576
-
Gly
TCC
[ENA]
¢þ
>WENV181383956
OFRH01002334
[OFRH] wastewater metagenome; Exp Tend NO 100WW
1290
1217
-
Gly
TCC
[ENA]
¢þ
>WENV181385918
OFRL01000101
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
10507
10434
-
Gly
TCC
[ENA]
¢þ
>WENV181386878
OFRL01020589
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
948
875
-
Gly
TCC
[ENA]
¢þ
>WENV181399536
OFSE01040972
[OFSE] wastewater metagenome; Exp Tend VB 50WW
397
470
+
Gly
TCC
[ENA]
¢þ
>WENV181400061
OFSF01001138
[OFSF] wastewater metagenome; Exp Tend VB 100WW
4783
4856
+
Gly
TCC
[ENA]
¢þ
>WENV183727718
PJTP01000098
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
76821
76894
+
Gly
TCC
[ENA]
¢þ
>WENV183728452
PJTQ01000057
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
257
184
-
Gly
TCC
[ENA]
¢þ
>WENV183731225
PJTS01021848
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
232
159
-
Gly
TCC
[ENA]
¢þ
>WENV183733406
PJTY01001691
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
1337
1410
+
Gly
TCC
[ENA]
¢þ
>WENV183734708
PJTZ01047388
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
235
162
-
Gly
TCC
[ENA]
¢þ
>WENV183735435
PJUB01000004
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
450581
450654
+
Gly
TCC
[ENA]
¢þ
>WENV183739107
PJUE01001726
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
257
184
-
Gly
TCC
[ENA]
¢þ
>WENV183740465
PJUF01002390
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
7368
7441
+
Gly
TCC
[ENA]
¢þ
>WENV170229623
CEQG01140060
[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
355
428
+
Gly
TCC
[ENA]
¢þ
>WENV170553386
CXWK01016688
[CXWK] wastewater metagenome; activated sludge
2813
2886
+
Gly
TCC
[ENA]
¢þ
>WENV170564990
CZQE01000103
[CZQE] hydrothermal vent metagenome; ocean water
25125
25198
+
Gly
TCC
[ENA]
¢þ
>WENV170577570
FSSH01000208
[FSSH] freshwater metagenome; drinking water
108807
108880
+
Gly
TCC
[ENA]
¢þ
>WENV170577671
FSSH01000509
[FSSH] freshwater metagenome; drinking water
7702
7775
+
Gly
TCC
[ENA]
¢þ
>WENV170577915
FSSH01002675
[FSSH] freshwater metagenome; drinking water
2123
2196
+
Gly
TCC
[ENA]
¢þ
>WENV170577932
FSSH01003373
[FSSH] freshwater metagenome; drinking water
7344
7271
-
Gly
TCC
[ENA]
¢þ
>WENV170578249
FUFK010014250
[FUFK] metagenome; unknown
8115
8188
+
Gly
TCC
[ENA]
¢þ
>WENV170588980
FUFK010607039
[FUFK] metagenome; unknown
3241
3168
-
Gly
TCC
[ENA]
¢þ
>WENV170590421
FUFK010719397
[FUFK] metagenome; unknown
2483
2556
+
Gly
TCC
[ENA]
¢þ
>WENV170700889
LJSS01005887
[LJSS] hot springs metagenome; water from Lobios Hot Spring
634
561
-
Gly
TCC
[ENA]
¢þ
>WENV170710836
LNFM01002776
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
48779
48852
+
Gly
TCC
[ENA]
¢þ
>C191154783
CP037913
Alphaproteobacteria
Sphingomonas sp. AAP5 [CP037913]
528042
527969
-
Gly
TCC
-
¡û
>C191163740
CP039249
Alphaproteobacteria
Sphingomonas sp. PAMC26645 [CP039249]
1045515
1045588
+
Gly
TCC
-
¡û
>C191170976
CP039695
Alphaproteobacteria
Novosphingobium sp. EMRT-2 [CP039695]
2846982
2846909
-
Gly
TCC
-
¡û
>W141801047
JPDP01000726
Alphaproteobacteria
Sphingomonas sp. STIS6.2 [JPDP]
31604
31531
-
Gly
TCC
[ENA]
¡û
>W141805173
JPJC01000161
Alphaproteobacteria
Sphingomonas sp. FUKUSWIS1 [JPJC]
303
376
+
Gly
TCC
[ENA]
¡û
>W1911411917
NWVC01000003
Alphaproteobacteria
Sphingomonas adhaesiva DSM 7418 [NWVC]
185144
185217
+
Gly
TCC
[ENA]
¡û
>W1911411958
NWVD01000003
Alphaproteobacteria
Sphingomonas ginsenosidimutans KACC 14949 [NWVD]
455151
455224
+
Gly
TCC
[ENA]
¡û
>W1911687916
QLJC01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env8_1116 [QLJC]
33047
32974
-
Gly
TCC
[ENA]
¡û
>W1911687969
QLJD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env4_1116 [QLJD]
344052
344125
+
Gly
TCC
[ENA]
¡û
>W1911688022
QLJE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env3_1116 [QLJE]
33214
33141
-
Gly
TCC
[ENA]
¡û
>W1911688049
QLJF01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env2_1116 [QLJF]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911688116
QLJG01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt6_1016 [QLJG]
34329
34256
-
Gly
TCC
[ENA]
¡û
>W1911688189
QLJI01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt4_0816 [QLJI]
274373
274446
+
Gly
TCC
[ENA]
¡û
>W1911688240
QLJJ01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt2_0716 [QLJJ]
29625
29552
-
Gly
TCC
[ENA]
¡û
>W1911718484
QQWJ01000013
Alphaproteobacteria
Sphingomonas koreensis KCTC 2883 [QQWJ]
132739
132812
+
Gly
TCC
[ENA]
¡û
>W1911718528
QQWK01000012
Alphaproteobacteria
Sphingomonas koreensis KCTC 2882 [QQWK]
132739
132812
+
Gly
TCC
[ENA]
¡û
>W1911718553
QQWL01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env11_0417 [QQWL]
274176
274249
+
Gly
TCC
[ENA]
¡û
>W1911718594
QQWM01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env15_0417 [QQWM]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911718670
QQWN01000026
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env12_0417 [QQWN]
36409
36482
+
Gly
TCC
[ENA]
¡û
>W1911718685
QQWO01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env10_0317 [QQWO]
34329
34256
-
Gly
TCC
[ENA]
¡û
>W1911718727
QQWP01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NY1_0417 [QQWP]
177618
177545
-
Gly
TCC
[ENA]
¡û
>W1911718771
QQWQ01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env9_0217 [QQWQ]
274213
274286
+
Gly
TCC
[ENA]
¡û
>W1911718820
QQWR01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt10_0210 [QQWR]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911718861
QQWS01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt9_0208 [QQWS]
478275
478348
+
Gly
TCC
[ENA]
¡û
>W1911718908
QQWT01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt8_0208 [QQWT]
326147
326220
+
Gly
TCC
[ENA]
¡û
>W1911718954
QQWU01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt7_0906 [QQWU]
370650
370723
+
Gly
TCC
[ENA]
¡û
>W1911719162
QQWY01000009
Alphaproteobacteria
Sphingomonas sp. ABOLE ABOLE S-NIH.Pt18_1212 [QQWY]
113849
113776
-
Gly
TCC
[ENA]
¡û
>W1911719219
QQWZ01000020
Alphaproteobacteria
Sphingomonas sp. ABOLD ABOLD S-NIH.Pt20_1215 [QQWZ]
75749
75676
-
Gly
TCC
[ENA]
¡û
>W1911719250
QQXA01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt14_0612 [QQXA]
308080
308153
+
Gly
TCC
[ENA]
¡û
>W1911719297
QQXB01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt16_1112 [QQXB]
33047
32974
-
Gly
TCC
[ENA]
¡û
>W1911719339
QQXC01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt11_0411 [QQXC]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911719416
QQXD01000027
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt12_0112 [QQXD]
33047
32974
-
Gly
TCC
[ENA]
¡û
>W1911719463
QQXE01000026
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env5_1116 [QQXE]
33047
32974
-
Gly
TCC
[ENA]
¡û
>W1911719476
QQXF01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env7_1116 [QQXF]
521522
521595
+
Gly
TCC
[ENA]
¡û
>W1911719557
QQXG01000017
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env1_1016 [QQXG]
29312
29239
-
Gly
TCC
[ENA]
¡û
>W1911719833
QQXQ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env56_1217 [QQXQ]
30965
30892
-
Gly
TCC
[ENA]
¡û
>W1911719862
QQXR01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env55_1217 [QQXR]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911719916
QQXS01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env54_1217 [QQXS]
24020
23947
-
Gly
TCC
[ENA]
¡û
>W1911719953
QQXT01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env57_1217 [QQXT]
27280
27207
-
Gly
TCC
[ENA]
¡û
>W1911720010
QQXU01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env53_1017 [QQXU]
274235
274308
+
Gly
TCC
[ENA]
¡û
>W1911720059
QQXV01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env52_1017 [QQXV]
274214
274287
+
Gly
TCC
[ENA]
¡û
>W1911720089
QQXW01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env51_1017 [QQXW]
274279
274352
+
Gly
TCC
[ENA]
¡û
>W1911720135
QQXX01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env50_1017 [QQXX]
343868
343941
+
Gly
TCC
[ENA]
¡û
>W1911720183
QQXY01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env47_1017 [QQXY]
240128
240055
-
Gly
TCC
[ENA]
¡û
>W1911720228
QQXZ01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env46_1017 [QQXZ]
240128
240055
-
Gly
TCC
[ENA]
¡û
>W1911720270
QQYA01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env49_1017 [QQYA]
400000
400073
+
Gly
TCC
[ENA]
¡û
>W1911720315
QQYB01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env48_1017 [QQYB]
435816
435889
+
Gly
TCC
[ENA]
¡û
>W1911720363
QQYC01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env45_1017 [QQYC]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911720404
QQYD01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env44_0817 [QQYD]
274228
274301
+
Gly
TCC
[ENA]
¡û
>W1911720463
QQYE01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env43_0817 [QQYE]
32901
32828
-
Gly
TCC
[ENA]
¡û
>W1911720501
QQYF01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env42_0817 [QQYF]
34329
34256
-
Gly
TCC
[ENA]
¡û
>W1911720558
QQYG01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env41_0817 [QQYG]
36409
36482
+
Gly
TCC
[ENA]
¡û
>W1911720620
QQYH01000026
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env40_0817 [QQYH]
36409
36482
+
Gly
TCC
[ENA]
¡û
>W1911720660
QQYI01000013
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env39_0817 [QQYI]
113633
113706
+
Gly
TCC
[ENA]
¡û
>W1911720689
QQYJ01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env36_0717 [QQYJ]
34329
34256
-
Gly
TCC
[ENA]
¡û
>W1911720727
QQYK01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env38_0817 [QQYK]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911720775
QQYL01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env37_0717 [QQYL]
274190
274263
+
Gly
TCC
[ENA]
¡û
>W1911720812
QQYM01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env35_0717 [QQYM]
274168
274241
+
Gly
TCC
[ENA]
¡û
>W1911720862
QQYN01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env34_0717 [QQYN]
34328
34255
-
Gly
TCC
[ENA]
¡û
>W1911720903
QQYO01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env33_0717 [QQYO]
548111
548184
+
Gly
TCC
[ENA]
¡û
>W1911720952
QQYP01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env32_0717 [QQYP]
34328
34255
-
Gly
TCC
[ENA]
¡û
>W1911721012
QQYQ01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env31_0717 [QQYQ]
274167
274240
+
Gly
TCC
[ENA]
¡û
>W1911721049
QQYR01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env30_0717 [QQYR]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721087
QQYS01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env29_0717 [QQYS]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721131
QQYT01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env28_0717 [QQYT]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721186
QQYU01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env27_0717 [QQYU]
113893
113966
+
Gly
TCC
[ENA]
¡û
>W1911721221
QQYV01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env26_0717 [QQYV]
274211
274284
+
Gly
TCC
[ENA]
¡û
>W1911721269
QQYW01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env25_0717 [QQYW]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721314
QQYX01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env24_0717 [QQYX]
34328
34255
-
Gly
TCC
[ENA]
¡û
>W1911721360
QQYY01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env23_0717 [QQYY]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721426
QQYZ01000007
Alphaproteobacteria
Sphingomonas koreensis SK-CDC1_0717 [QQYZ]
178628
178555
-
Gly
TCC
[ENA]
¡û
>W1911721454
QQZA01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env20_0617 [QQZA]
274179
274252
+
Gly
TCC
[ENA]
¡û
>W1911721508
QQZB01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env19_0617 [QQZB]
36409
36482
+
Gly
TCC
[ENA]
¡û
>W1911721548
QQZC01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env22_0617 [QQZC]
34328
34255
-
Gly
TCC
[ENA]
¡û
>W1911721581
QQZD01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env21_0617 [QQZD]
521434
521507
+
Gly
TCC
[ENA]
¡û
>W1911721660
QQZE01000024
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env18_0517 [QQZE]
36409
36482
+
Gly
TCC
[ENA]
¡û
>W1911721675
QQZF01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env16_0517 [QQZF]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721719
QQZG01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env14_0417 [QQZG]
274370
274443
+
Gly
TCC
[ENA]
¡û
>W1911721764
QQZH01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env13_0417 [QQZH]
240129
240056
-
Gly
TCC
[ENA]
¡û
>W1911721810
QQZI01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env17_0517 [QQZI]
240130
240057
-
Gly
TCC
[ENA]
¡û
>W1911765783
QXDC01000003
Alphaproteobacteria
Hephaestia caeni DSM 25527 [QXDC]
167086
167159
+
Gly
TCC
[ENA]
¡û
>W1810089128
PGEN01000001
Alphaproteobacteria
Sphingomonas koreensis JSS26 [PGEN]
1926202
1926129
-
Gly
TCC
[ENA]
¡û
>W1810463398
PZZN01000001
Alphaproteobacteria
Sphingomonas aerolata NW12 [PZZN]
811089
811162
+
Gly
TCC
[ENA]
¡û
>W1810475051
QAIS01000205
Alphaproteobacteria
Sphingomonas sp. HMWF008 [QAIS]
636
709
+
Gly
TCC
[ENA]
¡û
>W1810476724
QAOF01000007
Alphaproteobacteria
Sphingomonas sp. PP-CE-3G-477 [QAOF]
118928
119001
+
Gly
TCC
[ENA]
¡û
>W1810476767
QAOG01000003
Alphaproteobacteria
Sphingomonas aurantiaca MA101b [QAOG]
211193
211120
-
Gly
TCC
[ENA]
¡û
>W1810486873
QAYE01000001
Alphaproteobacteria
Sphingomonas faeni MA-olki [QAYE]
160534
160607
+
Gly
TCC
[ENA]
¡û
>W1810576581
QENQ01000001
Alphaproteobacteria
Sphingomonas pokkalii L3B27 [QENQ]
293784
293857
+
Gly
TCC
[ENA]
¡û
>W1810779191
QQNB01000002
Alphaproteobacteria
Sphingomonas aracearum WZY 27 [QQNB]
916993
916920
-
Gly
TCC
[ENA]
¡û
>SRA1014111
SRR023845.4021
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
153
226
+
Gly
TCC
[SRA]
>SRA1014272
SRR023845.66897
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
22
95
+
Gly
TCC
[SRA]
>SRA1014717
SRR023845.278298
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
218
145
-
Gly
TCC
[SRA]
>SRA1014790
SRR023845.316249
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
192
265
+
Gly
TCC
[SRA]
>SRA1015067
SRR023845.446579
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
20
93
+
Gly
TCC
[SRA]
>SRA1015740
SRR023846.177278
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
83
10
-
Gly
TCC
[SRA]
>SRA1016167
SRR023846.377201
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
88
161
+
Gly
TCC
[SRA]
>SRA1016173
SRR023846.378591
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
242
169
-
Gly
TCC
[SRA]
>SRA1016174
SRR023846.379156
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
242
169
-
Gly
TCC
[SRA]
>SRA1016258
SRR023846.422948
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
45
118
+
Gly
TCC
[SRA]
>SRA1016531
SRR023846.545059
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
88
161
+
Gly
TCC
[SRA]
>C151054334
CP009571
Alphaproteobacteria
Sphingomonas taxi ATCC 55669 [CP009571]
777438
777511
+
Gly
TCC
[Ensembl]
¡û
>C151073198
CP010836
Alphaproteobacteria
Sphingomonas hengshuiensis WHSC-8 [CP010836]
3702282
3702355
+
Gly
TCC
[Ensembl]
¡û
>W1510019731
BBXA01000019
Alphaproteobacteria
Novosphingobium sp. MD-1 [BBXA]
66250
66323
+
Gly
TCC
[ENA]
¡û
>W1511352591
JROH01000078
Alphaproteobacteria
Sphingomonas sp. 37zxx [JROH]
1173
1100
-
Gly
TCC
[ENA]
¡û
>W1511357050
JRVI01000028
Alphaproteobacteria
Sphingomonas sp. Ant20 [JRVI]
31800
31727
-
Gly
TCC
[ENA]
¡û
>W1511361497
JSBN01000063
Alphaproteobacteria
Sphingomonas sp. Ant H11 [JSBN]
102449
102522
+
Gly
TCC
[ENA]
¡û
>W1511390135
JSXI01000016
Alphaproteobacteria
Sphingomonas sp. ERG5 [JSXI]
215019
214946
-
Gly
TCC
[ENA]
¡û
>W11179059
AGFU01000018
Alphaproteobacteria
Sphingomonas elodea ATCC 31461 [AGFU]
42428
42355
-
Gly
TCC
[ENA]
¡û
>W121031759
AHHA01000021
Alphaproteobacteria
Sphingomonas sp. PAMC 26617 [AHHA]
238908
238835
-
Gly
TCC
[ENA]
¡û
>W121033232
AHIR01000012
Alphaproteobacteria
Sphingomonas echinoides ATCC 14820 [AHIR]
118406
118479
+
Gly
TCC
[ENA]
¡û
>W121033302
AHIS01000105
Alphaproteobacteria
Sphingomonas sp. PAMC 26605 [AHIS]
8612
8685
+
Gly
TCC
[ENA]
¡û
>W121046794
AIDW01000009
Alphaproteobacteria
Sphingomonas sp. PAMC 26621 [AIDW]
205342
205269
-
Gly
TCC
[ENA]
¡û
>W121105800
ALBQ01000012
Alphaproteobacteria
Sphingomonas sp. ATCC 31555 [ALBQ]
18470
18543
+
Gly
TCC
[ENA]
¡û
>W1610074534
BCWT01000103
Alphaproteobacteria
Sphingomonas adhaesiva NBRC 15099 [BCWT]
676
603
-
Gly
TCC
[ENA]
¡û
>W1610076531
BCYU01000081
Alphaproteobacteria
Sphingomonas asaccharolytica NBRC 15499 [BCYU]
4111
4184
+
Gly
TCC
[ENA]
¡û
>W1610076624
BCYW01000022
Alphaproteobacteria
Sphingomonas koreensis NBRC 16723 [BCYW]
45773
45846
+
Gly
TCC
[ENA]
¡û
>W1610076715
BCYY01000036
Alphaproteobacteria
Sphingomonas pituitosa NBRC 102491 [BCYY]
14090
14017
-
Gly
TCC
[ENA]
¡û
>W1610732120
LMJZ01000012
Alphaproteobacteria
Sphingomonas sp. Leaf5 [LMJZ]
122245
122172
-
Gly
TCC
[ENA]
¡û
>W1610732272
LMKC01000002
Alphaproteobacteria
Sphingomonas sp. Leaf9 [LMKC]
202766
202693
-
Gly
TCC
[ENA]
¡û
>W1610732457
LMKG01000002
Alphaproteobacteria
Sphingomonas sp. Leaf11 [LMKG]
202710
202637
-
Gly
TCC
[ENA]
¡û
>W1610732504
LMKH01000012
Alphaproteobacteria
Sphingomonas sp. Leaf208 [LMKH]
385550
385477
-
Gly
TCC
[ENA]
¡û
>W1610732789
LMKN01000001
Alphaproteobacteria
Sphingomonas sp. Leaf20 [LMKN]
1022869
1022942
+
Gly
TCC
[ENA]
¡û
>W1610732895
LMKP01000017
Alphaproteobacteria
Sphingomonas sp. Leaf22 [LMKP]
24696
24769
+
Gly
TCC
[ENA]
¡û
>W1610732985
LMKR01000002
Alphaproteobacteria
Sphingomonas sp. Leaf23 [LMKR]
782184
782111
-
Gly
TCC
[ENA]
¡û
>W1610733040
LMKS01000012
Alphaproteobacteria
Sphingomonas sp. Leaf24 [LMKS]
122246
122173
-
Gly
TCC
[ENA]
¡û
>W1610733095
LMKT01000023
Alphaproteobacteria
Sphingomonas sp. Leaf226 [LMKT]
685145
685072
-
Gly
TCC
[ENA]
¡û
>W1610733141
LMKU01000023
Alphaproteobacteria
Sphingomonas sp. Leaf25 [LMKU]
69190
69117
-
Gly
TCC
[ENA]
¡û
>W1610733228
LMKW01000008
Alphaproteobacteria
Sphingomonas sp. Leaf230 [LMKW]
589325
589252
-
Gly
TCC
[ENA]
¡û
>W1610733294
LMKX01000008
Alphaproteobacteria
Sphingomonas sp. Leaf28 [LMKX]
212348
212275
-
Gly
TCC
[ENA]
¡û
>W1610733505
LMLC01000001
Alphaproteobacteria
Sphingomonas sp. Leaf34 [LMLC]
642694
642767
+
Gly
TCC
[ENA]
¡û
>W1610733583
LMLD01000011
Alphaproteobacteria
Sphingomonas sp. Leaf38 [LMLD]
510831
510758
-
Gly
TCC
[ENA]
¡û
>W1610733673
LMLF01000007
Alphaproteobacteria
Sphingomonas sp. Leaf42 [LMLF]
309096
309169
+
Gly
TCC
[ENA]
¡û
>W1610734175
LMLN01000003
Alphaproteobacteria
Sphingomonas sp. Leaf62 [LMLN]
57374
57447
+
Gly
TCC
[ENA]
¡û
>W1610734302
LMLP01000023
Alphaproteobacteria
Sphingomonas sp. Leaf67 [LMLP]
204428
204355
-
Gly
TCC
[ENA]
¡û
>W1610734438
LMLS01000003
Alphaproteobacteria
Sphingomonas sp. Leaf231 [LMLS]
77647
77720
+
Gly
TCC
[ENA]
¡û
>W1610740351
LMQO01000004
Alphaproteobacteria
Sphingomonas sp. Leaf407 [LMQO]
309133
309206
+
Gly
TCC
[ENA]
¡û
>W1610740402
LMQP01000003
Alphaproteobacteria
Sphingomonas sp. Leaf412 [LMQP]
92626
92553
-
Gly
TCC
[ENA]
¡û
>W1610754283
LNFI01000003
Alphaproteobacteria
Sphingomonadales bacterium Ga0077557 [LNFI]
48802
48875
+
Gly
TCC
[ENA]
¡û
>W1610766362
LNOS01000051
Alphaproteobacteria
Sphingomonas sp. WG [LNOS]
18486
18559
+
Gly
TCC
[ENA]
¡û
>W1610784519
LOEV01000184
Alphaproteobacteria
Alphaproteobacteria bacterium BRH_c36 [LOEV]
396
323
-
Gly
TCC
[ENA]
¡û
>W1610913420
LSJF01000429
Alphaproteobacteria
Sphingomonas sp. CCH9-H8 [LSJF]
2357
2284
-
Gly
TCC
[ENA]
¡û
>W1610913706
LSJM01000310
Alphaproteobacteria
Sphingomonas sp. CCH9-E2 [LSJM]
12743
12816
+
Gly
TCC
[ENA]
¡û
>W1610913761
LSJO01000194
Alphaproteobacteria
Sphingomonas sp. CCH9-F2 [LSJO]
824
751
-
Gly
TCC
[ENA]
¡û
>W1611011781
LXVY01000004
Alphaproteobacteria
Sphingomonas sp. TDK1 [LXVY]
88430
88503
+
Gly
TCC
[ENA]
¡û
>W1710068325
BCTR01000095
Alphaproteobacteria
Sphingomonas azotifigens NBRC 15497 [BCTR]
3859
3786
-
Gly
TCC
[ENA]
¡û
>W1710071652
BCWT01000103
Alphaproteobacteria
Sphingomonas adhaesiva NBRC 15099 [BCWT]
676
603
-
Gly
TCC
[ENA]
¡û
>W1710074220
BCYU01000081
Alphaproteobacteria
Sphingomonas asaccharolytica NBRC 15499 [BCYU]
4111
4184
+
Gly
TCC
[ENA]
¡û
>W1710074313
BCYW01000022
Alphaproteobacteria
Sphingomonas koreensis NBRC 16723 [BCYW]
45773
45846
+
Gly
TCC
[ENA]
¡û
>W1710074404
BCYY01000036
Alphaproteobacteria
Sphingomonas pituitosa NBRC 102491 [BCYY]
14090
14017
-
Gly
TCC
[ENA]
¡û
>W1710566298
FORV01000007
Alphaproteobacteria
Sphingomonas sp. NFR04 [FORV]
27655
27728
+
Gly
TCC
[ENA]
¡û
>W1710571522
FOVZ01000002
Alphaproteobacteria
Sphingomonas sp. OK281 [FOVZ]
16864
16791
-
Gly
TCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
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Start
End
Direction
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Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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