This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.483657 (23 seq.)
>W1711091104
LTBC01000008
Bacillota
Moorella mulderi DSM 14980 [LTBC]
47804
47729
-
Ala
GGC
[ENA]
¡û
>W1711352281
MDDB01000004
Bacillota
Moorella thermoacetica [MDDB]
2466
2541
+
Ala
GGC
[ENA]
¡û
>W1711352339
MDDC01000021
Bacillota
Moorella thermoacetica [MDDC]
21510
21435
-
Ala
GGC
[ENA]
¡û
>W1711352376
MDDD01000007
Bacillota
Moorella thermoacetica [MDDD]
151098
151023
-
Ala
GGC
[ENA]
¡û
>W1711352446
MDDE01000008
Bacillota
Moorella thermoacetica [MDDE]
111737
111662
-
Ala
GGC
[ENA]
¡û
>W1711428560
MIHH01000018
Bacillota
Moorella thermoacetica [MIHH]
23652
23727
+
Ala
GGC
[ENA]
¡û
>W1711428598
MIIF01000009
Bacillota
Moorella thermoacetica [MIIF]
2468
2543
+
Ala
GGC
[ENA]
¡û
>C171055174
CP017019
Bacillota
Moorella thermoacetica DSM 103132 [CP017019]
329698
329773
+
Ala
GGC
-
¡û
>C171058944
CP017237
Bacillota
Moorella thermoacetica DSM 103284 [CP017237]
305867
305942
+
Ala
GGC
-
¡û
>C014163
CP000232
Bacillota
Moorella thermoacetica [CP000232]
417084
417159
+
Ala
GGC
[Ensembl]
¡û
>C024575
AP006840
Bacillota
Symbiobacterium thermophilum IAM 14863 IAM14863 [AP006840]
842160
842235
+
Ala
GGC
[Ensembl]
¡û
>W141229804
BARR01000031
Bacillota
Moorella thermoacetica Y72 [BARR]
9675
9750
+
Ala
GGC
[ENA]
¡û
>WENV170576524
FRDC01000803
[FRDC] freshwater metagenome; water
17887
17812
-
Ala
GGC
[ENA]
¢þ
>C191073420
CP031054
Bacillota
Moorella thermoacetica 39073-HH [CP031054]
423808
423883
+
Ala
GGC
-
¡û
>W09100919
AADT03000004
Bacillota
Moorella thermoacetica ATCC 39073 [AADT]
45306
45231
-
Ala
GGC
[ENA]
¡û
>W1910180058
BJKN01000001
Bacillota
Moorella sp. E308F [BJKN]
1195390
1195465
+
Ala
GGC
[ENA]
¡û
>W1910180137
BJKO01000001
Bacillota
Moorella sp. E306M [BJKO]
737040
736965
-
Ala
GGC
[ENA]
¡û
>W1810367294
PVXL01000050
Bacillota
Moorella stamsii DSM 26271 [PVXL]
106095
106170
+
Ala
GGC
[ENA]
¡û
>W1810367348
PVXM01000045
Bacillota
Moorella humiferrea DSM 23265 [PVXM]
15751
15826
+
Ala
GGC
[ENA]
¡û
>C151094349
CP012369
Bacillota
Moorella thermoacetica DSM 521 [CP012369]
331384
331459
+
Ala
GGC
-
¡û
>C151094399
CP012370
Bacillota
Moorella thermoacetica DSM 2955 [CP012370]
415281
415356
+
Ala
GGC
-
¡û
>W1510100272
CELZ01000036
Bacillota
Moorella glycerini NMP [CELZ]
28489
28414
-
Ala
GGC
[ENA]
¡û
>W1610925303
LTBC01000008
Bacillota
Moorella mulderi DSM 14980 [LTBC]
47804
47729
-
Ala
GGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK