tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.4869 (51 seq.)
>W1710867094 LMHZ01000023 Betaproteobacteria Noviherbaspirillum sp. Root189 [LMHZ] 13525 13432 - Ser GCT [ENA] ¡û
>W1711082090 LSTO01000001 Betaproteobacteria Noviherbaspirillum denitrificans [LSTO] 2528755 2528662 - Ser GCT [ENA] ¡û
>W131046007 AMSA01000003 Betaproteobacteria Herbaspirillum rubrisubalbicans Os45 [AMSA] 494003 493910 - Ser GCT [ENA] ¡û
>W131046049 AMSB01000001 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 506059 505966 - Ser GCT [ENA] ¡û
>W131062291 ANJR01000025 Betaproteobacteria Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] 228677 228770 + Ser GCT [ENA] ¡û
>W1711430746 MIJG01000008 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 329711 329618 - Ser GCT [ENA] ¡û
>W1711765128 MUXB01000114 Betaproteobacteria Herbaspirillum sp. VT-16-41 [MUXB] 229187 229094 - Ser GCT [ENA] ¡û
>W1712110240 NJGU01000001 Betaproteobacteria Herbaspirillum robiniae HZ10 [NJGU] 448341 448434 + Ser GCT [ENA] ¡û
>W1712110311 NJGV01000002 Betaproteobacteria Herbaspirillum aquaticum [NJGV] 239509 239416 - Ser GCT [ENA] ¡û
>C171021240 CP013136 Betaproteobacteria Herbaspirillum seropedicae AU14040 [CP013136] 2381421 2381328 - Ser GCT - ¡û
>W131052471 AMYZ01000005 Betaproteobacteria beta proteobacterium L13 [AMYZ] 73385 73292 - Ser GCT [ENA] ¡û
>W141003816 AEEC02000007 Betaproteobacteria Herbaspirillum frisingense GSF30 [AEEC] 71274 71367 + Ser GCT [ENA] ¡û
>WENV180311229 OBJT01176662 [OBJT] soil metagenome; soil 214 307 + Ser GCT [ENA] ¢þ
>WENV181221651 OFCW01000325 [OFCW] microbial mat metagenome; Microbial Mat 301 208 - Ser GCT [ENA] ¢þ
>WENV181368470 OFQL01007496 [OFQL] freshwater metagenome; Freshwater Lake 622 715 + Ser GCT [ENA] ¢þ
>WENV181368967 OFQN01006576 [OFQN] freshwater metagenome; Freshwater Lake 266 173 - Ser GCT [ENA] ¢þ
>WENV181369936 OFQR01002656 [OFQR] freshwater metagenome; Freshwater Lake 1201 1294 + Ser GCT [ENA] ¢þ
>WENV181384772 OFRI01009351 [OFRI] wastewater metagenome; Exp Tend VB 90WW 874 967 + Ser GCT [ENA] ¢þ
>WENV181400351 OFSF01004994 [OFSF] wastewater metagenome; Exp Tend VB 100WW 297 204 - Ser GCT [ENA] ¢þ
>WENV181838839 OGVN01025198 [OGVN] freshwater metagenome; freshwater 691 784 + Ser GCT [ENA] ¢þ
>WENV183730177 PJTR01002096 [PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment 260 353 + Ser GCT [ENA] ¢þ
>WENV183733519 PJTY01003373 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 1553 1460 - Ser GCT [ENA] ¢þ
>WENV183735083 PJUA01000809 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 10202 10109 - Ser GCT [ENA] ¢þ
>WENV183735791 PJUB01002603 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 2738 2645 - Ser GCT [ENA] ¢þ
>WENV183739229 PJUE01003870 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 2846 2753 - Ser GCT [ENA] ¢þ
>WENV170165398 CEON01118600 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 361 454 + Ser GCT [ENA] ¢þ
>WENV170201742 CEPQ01048467 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2314 2407 + Ser GCT [ENA] ¢þ
>WENV170573180 FLYJ01002779 [FLYJ] hot springs metagenome; Sediment 1359 1266 - Ser GCT [ENA] ¢þ
>WENV170840725 MDSZ01209831 [MDSZ] marine metagenome; seawater 358 451 + Ser GCT [ENA] ¢þ
>C181071862 CP022736 Betaproteobacteria Herbaspirillum sp. meg3 [CP022736] 2142915 2142822 - Ser GCT - ¡û
>C191029371 CP024996 Betaproteobacteria Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] 2369084 2368991 - Ser GCT - ¡û
>C191124268 CP034395 Betaproteobacteria Herbaspirillum seropedicae AU13965 [CP034395] 2264179 2264086 - Ser GCT - ¡û
>C191138939 CP035311 Betaproteobacteria Janthinobacterium sp. 17J80-10 [CP035311] 2664263 2664170 - Ser GCT - ¡û
>C191156658 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 2458920 2458827 - Ser GCT - ¡û
>W1910015388 BDOQ01000006 Betaproteobacteria Novimethylophilus kurashikiensis La2-4 [BDOQ] 217646 217553 - Ser GCT [ENA] ¡û
>W1910548763 FZOT01000004 Betaproteobacteria Noviherbaspirillum humi U15 [FZOT] 83060 83153 + Ser GCT [ENA] ¡û
>W1910577836 JUGD01000003 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 136641 136734 + Ser GCT [ENA] ¡û
>W1910578292 JWJC01000006 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 290042 290135 + Ser GCT [ENA] ¡û
>W1911802728 QYUN01000002 Betaproteobacteria Noviherbaspirillum cavernae K2R10-39 [QYUN] 1634840 1634933 + Ser GCT [ENA] ¡û
>W1810194036 PKOI01000007 Betaproteobacteria Herbaspirillum sp. BH-1 [PKOI] 129386 129479 + Ser GCT [ENA] ¡û
>W1810887516 QUQN01000001 Betaproteobacteria Herbaspirillum sp. 3R-3a1 [QUQN] 48338 48245 - Ser GCT [ENA] ¡û
>C151087603 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 2406078 2405985 - Ser GCT [Ensembl] ¡û
>C151104250 LN827929 Betaproteobacteria Candidatus Methylopumilus planktonicus MMS-10A-171 [LN827929] 1078645 1078738 + Ser GCT [Ensembl] ¡û
>C10107836 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 2406249 2406156 - Ser GCT [Ensembl] ¡û
>W1511480672 JWJG01000028 Betaproteobacteria Noviherbaspirillum autotrophicum TSA66 [JWJG] 3484727 3484634 - Ser GCT [ENA] ¡û
>W1511678856 LFDT01000009 Betaproteobacteria Vogesella sp. EB [LFDT] 13793 13700 - Ser GCT [ENA] ¡û
>C161060476 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 2315557 2315464 - Ser GCT [Ensembl] ¡û
>W1610071864 BCUJ01000035 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 4636 4543 - Ser GCT [ENA] ¡û
>W121068713 AJVC01000003 Betaproteobacteria Herbaspirillum sp. GW103 [AJVC] 885107 885014 - Ser GCT [ENA] ¡û
>W1610729440 LMHZ01000023 Betaproteobacteria Noviherbaspirillum sp. Root189 [LMHZ] 13525 13432 - Ser GCT [ENA] ¡û
>W1710069066 BCUJ01000035 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 4636 4543 - Ser GCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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