tRNA genes clustered and arranged according to each identical group

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Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.487572 (55 seq.)
>W1710860652 LMDB01000004 Betaproteobacteria Duganella sp. Root336D2 [LMDB] 133829 133754 - Arg CCG [ENA] ¡û
>W1710867236 LMIC01000019 Betaproteobacteria Duganella sp. Root198D2 [LMIC] 62292 62367 + Arg CCG [ENA] ¡û
>W1710867316 LMIE01000003 Betaproteobacteria Hydrogenophaga sp. Root209 [LMIE] 144817 144742 - Arg CCG [ENA] ¡û
>W1711073549 LSIQ01000541 Betaproteobacteria Comamonadaceae bacterium CCH12-A10 [LSIQ] 7182 7107 - Arg CCG [ENA] ¡û
>W1711075807 LSKS01000327 Betaproteobacteria Acidovorax sp. CCH12-A4 [LSKS] 18578 18503 - Arg CCG [ENA] ¡û
>W1711386859 MEFV01000019 Betaproteobacteria Comamonas sp. SCN 67-35 [MEFV] 31190 31115 - Arg CCG [ENA] ¡û
>W1711394838 MERS01000026 Betaproteobacteria Burkholderiales bacterium GWE1_65_30 [MERS] 70406 70331 - Arg CCG [ENA] ¡û
>W1711394846 MERT01000010 Betaproteobacteria Burkholderiales bacterium GWF1_66_17 [MERT] 57515 57440 - Arg CCG [ENA] ¡û
>W1711394921 MESO01000026 Betaproteobacteria Burkholderiales bacterium RIFOXYC12_FULL_65_23 [MESO] 15791 15866 + Arg CCG [ENA] ¡û
>W1711504553 MKUR01000013 Betaproteobacteria Burkholderiales bacterium 66-26 [MKUR] 31150 31075 - Arg CCG [ENA] ¡û
>W1711581703 MNUL01000096 Betaproteobacteria Comamonadaceae bacterium CG1_02_60_18 [MNUL] 14468 14393 - Arg CCG [ENA] ¡û
>W1711583958 MNXW01000155 Betaproteobacteria Comamonadaceae bacterium CG2_30_57_122 [MNXW] 6546 6621 + Arg CCG [ENA] ¡û
>W1711583970 MNXX01000004 Betaproteobacteria Comamonadaceae bacterium CG2_30_59_20 [MNXX] 18725 18650 - Arg CCG [ENA] ¡û
>W1711584033 MNXY01000185 Betaproteobacteria Comamonadaceae bacterium CG2_30_60_41 [MNXY] 7706 7781 + Arg CCG [ENA] ¡û
>W1712049984 NFUU01000003 Betaproteobacteria Hydrogenophaga sp. IBVHS1 [NFUU] 730834 730909 + Arg CCG [ENA] ¡û
>W1712096725 NIAZ01000036 Betaproteobacteria Acidovorax sp. T1m [NIAZ] 5933 6008 + Arg CCG [ENA] ¡û
>C171049782 CP016449 Betaproteobacteria Hydrogenophaga sp. RAC07 [CP016449] 4605280 4605355 + Arg CCG - ¡û
>C171118035 CP021359 Betaproteobacteria Acidovorax carolinensis NA2 [CP021359] 309061 309136 + Arg CCG - ¡û
>C171118086 CP021361 Betaproteobacteria Acidovorax carolinensis NA3 [CP021361] 311931 312006 + Arg CCG - ¡û
>C171118163 CP021362 Betaproteobacteria Acidovorax carolinensis P3 [CP021362] 3749594 3749519 - Arg CCG - ¡û
>C171118189 CP021366 Betaproteobacteria Acidovorax carolinensis P4 [CP021366] 329705 329780 + Arg CCG - ¡û
>C171120912 CP021648 Betaproteobacteria Acidovorax sp. T1 [CP021648] 270109 270184 + Arg CCG - ¡û
>W131227137 AUEX01000031 Betaproteobacteria Acidovorax sp. JHL-9 [AUEX] 28224 28299 + Arg CCG [ENA] ¡û
>W131229581 AUGX01000008 Betaproteobacteria Ottowia thiooxydans DSM 14619 [AUGX] 7720 7645 - Arg CCG [ENA] ¡û
>WENV180285348 OBID01347450 [OBID] metagenome; sludge 111 186 + Arg CCG [ENA] ¢þ
>WENV180395699 OBPT01085196 [OBPT] marine metagenome; ENVO:00002010 seawater 340 415 + Arg CCG [ENA] ¢þ
>WENV181308093 OFIS01000204 [OFIS] sludge metagenome; sludge 25646 25721 + Arg CCG [ENA] ¢þ
>WENV181401420 OFTX01000143 [OFTX] sludge metagenome; sludge 32385 32310 - Arg CCG [ENA] ¢þ
>WENV181401425 OFTX01000153 [OFTX] sludge metagenome; sludge 22659 22584 - Arg CCG [ENA] ¢þ
>WENV181402189 OFTY01000210 [OFTY] sludge metagenome; sludge 34608 34533 - Arg CCG [ENA] ¢þ
>WENV170019176 BBPD01005343 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 2766 2841 + Arg CCG [ENA] ¢þ
>WENV170019802 BBPE01000660 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 14288 14363 + Arg CCG [ENA] ¢þ
>WENV170639593 JFJP01005291 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 31779 31854 + Arg CCG [ENA] ¢þ
>WENV170706363 LNAP01002423 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1524 1599 + Arg CCG [ENA] ¢þ
>WENV170706582 LNAP01004408 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 6531 6456 - Arg CCG [ENA] ¢þ
>WENV170708599 LNAP01099188 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 334 259 - Arg CCG [ENA] ¢þ
>WENV170712559 LNFM01014879 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5480 5405 - Arg CCG [ENA] ¢þ
>WENV170713128 LNFM01024389 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5938 5863 - Arg CCG [ENA] ¢þ
>WENV170713273 LNFM01027736 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5222 5147 - Arg CCG [ENA] ¢þ
>WENV170714375 LNFM01070158 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1735 1660 - Arg CCG [ENA] ¢þ
>C181158447 CP027666 Betaproteobacteria Ottowia oryzae KADR8-3 [CP027666] 480680 480605 - Arg CCG - ¡û
>C181158586 CP027669 Betaproteobacteria Simplicispira suum SC1-8 [CP027669] 1254324 1254249 - Arg CCG - ¡û
>W1910700140 MESF01000197 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_66_35 [MESF] 16481 16556 + Arg CCG [ENA] ¡û
>W1911390933 NWBQ01000056 Betaproteobacteria Macromonas bipunctata DSM 12705 [NWBQ] 14996 14921 - Arg CCG [ENA] ¡û
>W1810355028 PVLR01000006 Betaproteobacteria Malikia spinosa 83 [PVLR] 15589 15664 + Arg CCG [ENA] ¡û
>W1810750692 QOZT01000029 Betaproteobacteria Acidovorax sp. BoFeN1 [QOZT] 11868 11793 - Arg CCG [ENA] ¡û
>C151002096 AP014568 Betaproteobacteria Serpentinimonas raichei A1 [AP014568] 2128075 2128150 + Arg CCG [Ensembl] ¡û
>W1610070588 BCTJ01000037 Betaproteobacteria Hydrogenophaga palleronii NBRC 102513 [BCTJ] 33631 33706 + Arg CCG [ENA] ¡û
>W1610722998 LMDB01000004 Betaproteobacteria Duganella sp. Root336D2 [LMDB] 133829 133754 - Arg CCG [ENA] ¡û
>W1610729582 LMIC01000019 Betaproteobacteria Duganella sp. Root198D2 [LMIC] 62292 62367 + Arg CCG [ENA] ¡û
>W1610729662 LMIE01000003 Betaproteobacteria Hydrogenophaga sp. Root209 [LMIE] 144817 144742 - Arg CCG [ENA] ¡û
>W1610912854 LSIQ01000541 Betaproteobacteria Comamonadaceae bacterium CCH12-A10 [LSIQ] 7182 7107 - Arg CCG [ENA] ¡û
>W1610915112 LSKS01000327 Betaproteobacteria Acidovorax sp. CCH12-A4 [LSKS] 18578 18503 - Arg CCG [ENA] ¡û
>W1710067961 BCTJ01000037 Betaproteobacteria Hydrogenophaga palleronii NBRC 102513 [BCTJ] 33631 33706 + Arg CCG [ENA] ¡û
>W1710532529 FNQJ01000021 Betaproteobacteria Acidovorax soli [FNQJ] 42250 42175 - Arg CCG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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