tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.499230 (114 seq.)
>W1710860659 LMDB01000007 Betaproteobacteria Duganella sp. Root336D2 [LMDB] 97558 97631 + Gly TCC [ENA] ¡û
>W1710863147 LMEW01000033 Betaproteobacteria Massilia sp. Root133 [LMEW] 478634 478707 + Gly TCC [ENA] ¡û
>W1710864677 LMGB01000011 Betaproteobacteria Massilia sp. Root1485 [LMGB] 18578 18651 + Gly TCC [ENA] ¡û
>W1710867214 LMIC01000003 Betaproteobacteria Duganella sp. Root198D2 [LMIC] 234028 234101 + Gly TCC [ENA] ¡û
>W1710893491 LNEU01000033 Betaproteobacteria Burkholderiales bacterium Ga0077544 [LNEU] 453 380 - Gly TCC [ENA] ¡û
>W131225117 AUDI01000002 Betaproteobacteria Pseudoduganella violaceinigra DSM 15887 [AUDI] 708 635 - Gly TCC [ENA] ¡û
>C171088483 CP019038 Betaproteobacteria Massilia putida 6NM-7 [CP019038] 4333103 4333176 + Gly TCC - ¡û
>C010370 CU207211 Betaproteobacteria Herminiimonas arsenicoxydans [CU207211] 3138278 3138205 - Gly TCC [Ensembl] ¡û
>WENV016252 AACY020459264 Marine microbial communities from Global Ocean Sampling (GOS) 1187 1260 + Gly TCC [ENA]
>WENV180018311 FSYV01000510 [FSYV] metagenome; soil 33375 33448 + Gly TCC [ENA] ¢þ
>WENV180022306 FTFY01000301 [FTFY] metagenome; soil 534 461 - Gly TCC [ENA] ¢þ
>WENV180026557 FTIU01002631 [FTIU] metagenome; soil 122 195 + Gly TCC [ENA] ¢þ
>WENV180032876 FTKD01002429 [FTKD] metagenome; soil 24058 23985 - Gly TCC [ENA] ¢þ
>WENV180036182 FTLB01545769 [FTLB] metagenome; soil 171 98 - Gly TCC [ENA] ¢þ
>WENV180110671 OAPN01003123 [OAPN] marine metagenome; 2011 51 124 + Gly TCC [ENA] ¢þ
>WENV180113251 OAPQ01014913 [OAPQ] marine metagenome; ENVO: 00002149 467 394 - Gly TCC [ENA] ¢þ
>WENV181188320 OEOE01081412 [OEOE] activated sludge metagenome; Activated Sludge 193 120 - Gly TCC [ENA] ¢þ
>WENV181368137 OFQK01000167 [OFQK] freshwater metagenome; Freshwater Lake 276 203 - Gly TCC [ENA] ¢þ
>WENV181368375 OFQL01001493 [OFQL] freshwater metagenome; Freshwater Lake 1059 986 - Gly TCC [ENA] ¢þ
>WENV181368674 OFQN01000018 [OFQN] freshwater metagenome; Freshwater Lake 32738 32665 - Gly TCC [ENA] ¢þ
>WENV181369528 OFQP01006708 [OFQP] freshwater metagenome; Freshwater Lake 856 929 + Gly TCC [ENA] ¢þ
>WENV181369983 OFQR01004315 [OFQR] freshwater metagenome; Freshwater Lake 328 255 - Gly TCC [ENA] ¢þ
>WENV181370366 OFQS01006016 [OFQS] freshwater metagenome; Freshwater Lake 856 929 + Gly TCC [ENA] ¢þ
>WENV181370609 OFQT01000643 [OFQT] freshwater metagenome; Freshwater Lake 1013 1086 + Gly TCC [ENA] ¢þ
>WENV181375379 OFQY01081047 [OFQY] wastewater metagenome; Exp Tend VB 10WW 298 225 - Gly TCC [ENA] ¢þ
>WENV181388117 OFRM01005478 [OFRM] wastewater metagenome; Exp Tend VB 0WW 1285 1358 + Gly TCC [ENA] ¢þ
>WENV181395796 OFSB01004739 [OFSB] freshwater metagenome; Freshwater Lake 680 753 + Gly TCC [ENA] ¢þ
>WENV181398563 OFSE01000200 [OFSE] wastewater metagenome; Exp Tend VB 50WW 15880 15953 + Gly TCC [ENA] ¢þ
>WENV181839319 OGVO01000720 [OGVO] freshwater metagenome; freshwater 905 978 + Gly TCC [ENA] ¢þ
>WENV181843120 OGVU01000944 [OGVU] freshwater metagenome; freshwater 1745 1672 - Gly TCC [ENA] ¢þ
>W141241315 CAHF01000005 Betaproteobacteria Noviherbaspirillum massiliense JC206 [CAHF] 265 192 - Gly TCC [ENA] ¡û
>WENV182523003 OIWS01003053 [OIWS] human gut metagenome; faeces 447 374 - Gly TCC [ENA] ¢þ
>WENV182553572 OJCR01012341 [OJCR] seawater metagenome; Sea water 1432 1359 - Gly TCC [ENA] ¢þ
>WENV182572254 OJFL01001947 [OJFL] seawater metagenome; Sea water 272 199 - Gly TCC [ENA] ¢þ
>WENV182579400 OJGS01008194 [OJGS] seawater metagenome; Sea water 183 110 - Gly TCC [ENA] ¢þ
>WENV182586768 OJHK01004600 [OJHK] seawater metagenome; Sea water 285 212 - Gly TCC [ENA] ¢þ
>WENV182591131 OJIK01032617 [OJIK] seawater metagenome; Sea water 419 492 + Gly TCC [ENA] ¢þ
>W141258915 CBXX010000031 Betaproteobacteria Herbaspirillum sp. RV1423 [CBXX] 57847 57920 + Gly TCC [ENA] ¡û
>WENV182896393 OKSN01025146 [OKSN] human gut metagenome; feces 11 84 + Gly TCC [ENA] ¢þ
>WENV183060935 OLHY01015145 [OLHY] seawater metagenome; Sea water 876 949 + Gly TCC [ENA] ¢þ
>WENV183648831 OQVS01044369 [OQVS] human gut metagenome; human gut 426 353 - Gly TCC [ENA] ¢þ
>WENV183650752 OQVT01038520 [OQVT] human gut metagenome; human gut 32 105 + Gly TCC [ENA] ¢þ
>WENV183697810 OUNK010144574 [OUNK] metagenome; soil 411 338 - Gly TCC [ENA] ¢þ
>WENV183697877 OUNK010228191 [OUNK] metagenome; soil 287 360 + Gly TCC [ENA] ¢þ
>WENV183733372 PJTY01001400 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 7917 7990 + Gly TCC [ENA] ¢þ
>WENV183739004 PJUE01000861 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 4971 5044 + Gly TCC [ENA] ¢þ
>WENV183744285 PJUK01004678 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 1295 1368 + Gly TCC [ENA] ¢þ
>WENV170140266 CENX01070446 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10 83 + Gly TCC [ENA] ¢þ
>WENV170146236 CENZ01042328 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 276 203 - Gly TCC [ENA] ¢þ
>W141401163 JDSS02000018 Betaproteobacteria Candidatus Accumulibacter vicinus sp. SK-01 [JDSS] 289435 289362 - Gly TCC [ENA] ¡û
>W141426809 JEMY01000002 Betaproteobacteria Candidatus Accumulibacter regalis sp. BA-93 [JEMY] 61553 61626 + Gly TCC [ENA] ¡û
>WENV170535275 CEWP01040522 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 688 761 + Gly TCC [ENA] ¢þ
>WENV170558450 CXWL01071333 [CXWL] groundwater metagenome; biofilm material 4513 4586 + Gly TCC [ENA] ¢þ
>WENV170639359 JFJP01002045 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 386 313 - Gly TCC [ENA] ¢þ
>WENV170639398 JFJP01002384 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 451 378 - Gly TCC [ENA] ¢þ
>WENV170639518 JFJP01003881 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 7140 7213 + Gly TCC [ENA] ¢þ
>WENV170866821 MDTB01137761 [MDTB] marine metagenome; seawater 310 237 - Gly TCC [ENA] ¢þ
>WENV170868655 MDTB01165026 [MDTB] marine metagenome; seawater 187114 187041 - Gly TCC [ENA] ¢þ
>WENV170953884 MEHZ011668676 [MEHZ] marine metagenome; marine surface water 327 254 - Gly TCC [ENA] ¢þ
>WENV170961339 MLJW01000008 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 322 249 - Gly TCC [ENA] ¢þ
>WENV170961418 MLJW01000031 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 203382 203455 + Gly TCC [ENA] ¢þ
>C181071846 CP022736 Betaproteobacteria Herbaspirillum sp. meg3 [CP022736] 5089445 5089372 - Gly TCC - ¡û
>C191138955 CP035311 Betaproteobacteria Janthinobacterium sp. 17J80-10 [CP035311] 2620 2547 - Gly TCC - ¡û
>C191157304 CP038026 Betaproteobacteria Pseudoduganella plicata DSM 17505 [CP038026] 4138564 4138637 + Gly TCC - ¡û
>W09134969 ACVF01000009 Betaproteobacteria Sideroxydans lithotrophicus ES-1 [ACVF] 120503 120576 + Gly TCC [ENA] ¡û
>W141821361 JQNN01000001 Betaproteobacteria Massilia sp. 9096 [JQNN] 4695812 4695885 + Gly TCC [ENA] ¡û
>WENV025398 AACY020885003 Marine microbial communities from Global Ocean Sampling (GOS) 545 472 - Gly TCC [ENA]
>W1910548748 FZOT01000001 Betaproteobacteria Noviherbaspirillum humi U15 [FZOT] 358 285 - Gly TCC [ENA] ¡û
>W1910700069 MESE01000010 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE] 422 349 - Gly TCC [ENA] ¡û
>W1911572363 PDBX01000001 Betaproteobacteria Collimonas sp. PA-H2 [PDBX] 2804624 2804697 + Gly TCC [ENA] ¡û
>W1911647595 QAJP01000003 Betaproteobacteria Herminiimonas sp. KBW02 [QAJP] 345 272 - Gly TCC [ENA] ¡û
>W1911802790 QYUO01000001 Betaproteobacteria Noviherbaspirillum saxi K1R23-30 [QYUO] 3260024 3259951 - Gly TCC [ENA] ¡û
>W1911802909 QYUQ01000002 Betaproteobacteria Noviherbaspirillum sedimenti K1S02-23 [QYUQ] 2800658 2800585 - Gly TCC [ENA] ¡û
>W1810330139 PUIP01000009 Betaproteobacteria Massilia phosphatilytica 12-OD1 [PUIP] 359 286 - Gly TCC [ENA] ¡û
>W1810659437 QJKB01000002 Betaproteobacteria Undibacterium pigrum DSM 19792 [QJKB] 871847 871920 + Gly TCC [ENA] ¡û
>W1810672456 QJTL01000002 Betaproteobacteria Duganella sp. GV083 [QJTL] 759987 760060 + Gly TCC [ENA] ¡û
>W1810677164 QKMN01000002 Betaproteobacteria Duganella sp. GV053 [QKMN] 759987 760060 + Gly TCC [ENA] ¡û
>W1810693400 QLLJ01000002 Betaproteobacteria Duganella sp. GV066 [QLLJ] 759987 760060 + Gly TCC [ENA] ¡û
>W1810694362 QLLZ01000002 Betaproteobacteria Duganella sp. GV039 [QLLZ] 759987 760060 + Gly TCC [ENA] ¡û
>W1810787968 QREC01000002 Betaproteobacteria Duganella sp. GV023 [QREC] 450564 450491 - Gly TCC [ENA] ¡û
>W1810885177 QUND01000002 Betaproteobacteria Duganella sp. GV046 [QUND] 760377 760450 + Gly TCC [ENA] ¡û
>W1810885811 QUNP01000002 Betaproteobacteria Duganella sp. GV038 [QUNP] 760377 760450 + Gly TCC [ENA] ¡û
>C151062579 CP009962 Betaproteobacteria Collimonas arenae Cal35 [CP009962] 457743 457816 + Gly TCC [Ensembl] ¡û
>C151082371 CP011409 Betaproteobacteria Herbaspirillum hiltneri N3 [CP011409] 4808366 4808293 - Gly TCC - ¡û
>WENV031260 AACY021351668 Marine microbial communities from Global Ocean Sampling (GOS) 331 258 - Gly TCC [ENA]
>C10101128 CP001715 Betaproteobacteria Candidatus Accumulibacter regalis [CP001715] 4021963 4021890 - Gly TCC [Ensembl] ¡û
>C10111858 CP001965 Betaproteobacteria Sideroxydans lithotrophicus ES-1 [CP001965] 752886 752959 + Gly TCC [Ensembl] ¡û
>W1511310184 JPQD01000006 Betaproteobacteria Massilia sp. JS1662 [JPQD] 295 222 - Gly TCC [ENA] ¡û
>W1511683845 LFLT01000055 Betaproteobacteria Herbaspirillum chlorophenolicum CPW301 [LFLT] 276 203 - Gly TCC [ENA] ¡û
>W1511683887 LFLU01000009 Betaproteobacteria Herbaspirillum rhizosphaerae UMS-37 [LFLU] 202643 202716 + Gly TCC [ENA] ¡û
>C161043151 CP012640 Betaproteobacteria Massilia sp. WG5 [CP012640] 524522 524595 + Gly TCC - ¡û
>C161053575 CP013232 Betaproteobacteria Collimonas fungivorans Ter6 [CP013232] 689287 689360 + Gly TCC [Ensembl] ¡û
>C161053670 CP013234 Betaproteobacteria Collimonas pratensis Ter91 [CP013234] 487161 487234 + Gly TCC [Ensembl] ¡û
>C161053768 CP013236 Betaproteobacteria Collimonas pratensis Ter291 [CP013236] 415224 415297 + Gly TCC [Ensembl] ¡û
>WENV057472 AACY023295671 Marine microbial communities from Global Ocean Sampling (GOS) 1141 1214 + Gly TCC [ENA]
>W121061978 AJHH01000675 Betaproteobacteria Herbaspirillum lusitanum P6-12 [AJHH] 14358 14285 - Gly TCC [ENA] ¡û
>W121085170 AKJA01000073 Betaproteobacteria Herbaspirillum sp. YR522 [AKJA] 297 224 - Gly TCC [ENA] ¡û
>W121086400 AKJW01000102 Betaproteobacteria Herbaspirillum sp. CF444 [AKJW] 332 259 - Gly TCC [ENA] ¡û
>W1610506437 FLQX01000155 Betaproteobacteria Candidatus Accumulibacter aalborgensis sp. S1 [FLQX] 6920 6993 + Gly TCC [ENA] ¡û
>W1610723005 LMDB01000007 Betaproteobacteria Duganella sp. Root336D2 [LMDB] 97558 97631 + Gly TCC [ENA] ¡û
>W1610725493 LMEW01000033 Betaproteobacteria Massilia sp. Root133 [LMEW] 478634 478707 + Gly TCC [ENA] ¡û
>W1610727023 LMGB01000011 Betaproteobacteria Massilia sp. Root1485 [LMGB] 18578 18651 + Gly TCC [ENA] ¡û
>W1610729560 LMIC01000003 Betaproteobacteria Duganella sp. Root198D2 [LMIC] 234028 234101 + Gly TCC [ENA] ¡û
>W1610753757 LNEU01000033 Betaproteobacteria Burkholderiales bacterium Ga0077544 [LNEU] 453 380 - Gly TCC [ENA] ¡û
>WENV080074 AATO01003330 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 125 52 - Gly TCC [ENA]
>W1710498940 FLQX01000155 Betaproteobacteria Candidatus Accumulibacter aalborgensis sp. S1 [FLQX] 6920 6993 + Gly TCC [ENA] ¡û
>W1710512865 FMZS01000013 Betaproteobacteria Massilia sp. PDC64 [FMZS] 197757 197830 + Gly TCC [ENA] ¡û
>W1710515871 FNCD01000008 Betaproteobacteria Duganella sp. OV458 [FNCD] 329520 329593 + Gly TCC [ENA] ¡û
>W1710519295 FNEQ01000004 Betaproteobacteria Duganella sp. OV510 [FNEQ] 164485 164412 - Gly TCC [ENA] ¡û
>W1710545168 FOBG01000003 Betaproteobacteria Duganella sp. CF402 [FOBG] 414526 414453 - Gly TCC [ENA] ¡û
>W1710557527 FOLC01000004 Betaproteobacteria Collimonas sp. OK412 [FOLC] 15712 15785 + Gly TCC [ENA] ¡û
>W1710561500 FOOF01000003 Betaproteobacteria Duganella sp. CF458 [FOOF] 142362 142289 - Gly TCC [ENA] ¡û
>W1710564238 FOQI01000020 Betaproteobacteria Collimonas sp. OK307 [FOQI] 84300 84373 + Gly TCC [ENA] ¡û
>W1710593039 FRCX01000012 Betaproteobacteria Duganella sacchari [FRCX] 182511 182584 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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