tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.504022 (70 seq.)
>W1710892688 LNDZ01000032 Betaproteobacteria Betaproteobacteria bacterium Ga0074130 [LNDZ] 80009 80082 + Gly TCC [ENA] ¡û
>W131046077 AMSB01000011 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 426 353 - Gly TCC [ENA] ¡û
>W131160254 AQWL01000002 Betaproteobacteria Thiobacillus denitrificans DSM 12475 [AQWL] 454348 454421 + Gly TCC [ENA] ¡û
>W131168094 ARDU01000009 Betaproteobacteria Thiobacillus thioparus DSM 505 [ARDU] 575 502 - Gly TCC [ENA] ¡û
>W131223579 AUCE01000011 Betaproteobacteria Azonexus hydrophilus DSM 23864 [AUCE] 705145 705218 + Gly TCC [ENA] ¡û
>W1711386436 MEFI01000007 Betaproteobacteria Thiobacillus sp. SCN 63-1177 [MEFI] 395 322 - Gly TCC [ENA] ¡û
>W1711386465 MEFK01000267 Betaproteobacteria Thiobacillus sp. SCN 63-374 [MEFK] 363 290 - Gly TCC [ENA] ¡û
>W1711387312 MEGN01000001 Betaproteobacteria Thiobacillus sp. SCN 65-179 [MEGN] 394 321 - Gly TCC [ENA] ¡û
>W1711387364 MEGO01000022 Betaproteobacteria Thiobacillus sp. SCN 64-317 [MEGO] 386 313 - Gly TCC [ENA] ¡û
>W1711430700 MIJG01000001 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 1053546 1053473 - Gly TCC [ENA] ¡û
>W1711504040 MKUE01000079 Betaproteobacteria Thiobacillus sp. 65-1059 [MKUE] 134633 134706 + Gly TCC [ENA] ¡û
>W1711504098 MKUF01000015 Betaproteobacteria Thiobacillus sp. 65-69 [MKUF] 600956 601029 + Gly TCC [ENA] ¡û
>W1711504117 MKUG01000090 Betaproteobacteria Thiobacillus sp. 65-1402 [MKUG] 25977 26050 + Gly TCC [ENA] ¡û
>W1711506499 MKWL01000019 Betaproteobacteria Thiobacillus sp. 0-1251 [MKWL] 200775 200848 + Gly TCC [ENA] ¡û
>W1711506533 MKWM01000019 Betaproteobacteria Thiobacillus sp. 63-78 [MKWM] 425 352 - Gly TCC [ENA] ¡û
>W1711506578 MKWN01000029 Betaproteobacteria Thiobacillus sp. 65-29 [MKWN] 348 275 - Gly TCC [ENA] ¡û
>W1712110285 NJGU01000016 Betaproteobacteria Herbaspirillum robiniae HZ10 [NJGU] 96453 96526 + Gly TCC [ENA] ¡û
>C171094890 CP019509 Betaproteobacteria Aquaspirillum sp. LM1 [CP019509] 215036 215109 + Gly TCC - ¡û
>C007460 CP000089 Betaproteobacteria Dechloromonas aromatica [CP000089] 347506 347579 + Gly TCC [Ensembl] ¡û
>w028108 ABCT01000002 Betaproteobacteria Limnobacter sp. MED105 [ABCT] 13349 13279 - Gly TCC [ENA] ¡û
>W141003843 AEEC02000036 Betaproteobacteria Herbaspirillum frisingense GSF30 [AEEC] 55002 55075 + Gly TCC [ENA] ¡û
>WENV180109692 OAPK01054892 [OAPK] marine metagenome; ENVO:00002042 197 124 - Gly TCC [ENA] ¢þ
>WENV180117954 OARM01004756 [OARM] human gut metagenome; ENVO:feces 209 282 + Gly TCC [ENA] ¢þ
>WENV180256335 OBEQ010807461 [OBEQ] groundwater metagenome; groundwater 202 275 + Gly TCC [ENA] ¢þ
>WENV180295745 OBIZ01284139 [OBIZ] soil metagenome; soil 190 263 + Gly TCC [ENA] ¢þ
>WENV180311309 OBJT01219710 [OBJT] soil metagenome; soil 161 88 - Gly TCC [ENA] ¢þ
>WENV180351426 OBLQ010055700 [OBLQ] soil metagenome; soil 468 395 - Gly TCC [ENA] ¢þ
>WENV181221669 OFCW01000495 [OFCW] microbial mat metagenome; Microbial Mat 144 71 - Gly TCC [ENA] ¢þ
>WENV181372004 OFQW01007171 [OFQW] wastewater metagenome; Exp Tend NO 90WW 1010 937 - Gly TCC [ENA] ¢þ
>WENV181376087 OFQZ01015781 [OFQZ] wastewater metagenome; Exp Tend NO 0WW 1352 1425 + Gly TCC [ENA] ¢þ
>WENV181379078 OFRC01018746 [OFRC] wastewater metagenome; Exp Tend CN 10WW 565 492 - Gly TCC [ENA] ¢þ
>WENV181390495 OFRO01055275 [OFRO] wastewater metagenome; Exp Tend NO 10WW 170 97 - Gly TCC [ENA] ¢þ
>WENV181415015 OGCL01003146 [OGCL] hot springs metagenome; Hot spring water 368 295 - Gly TCC [ENA] ¢þ
>WENV181415707 OGCL01020251 [OGCL] hot springs metagenome; Hot spring water 330 257 - Gly TCC [ENA] ¢þ
>WENV181834817 OGVG01001275 [OGVG] freshwater metagenome; freshwater 866 793 - Gly TCC [ENA] ¢þ
>W141223407 BADF01000432 Betaproteobacteria Herbaspirillum sp. B39 [BADF] 205 278 + Gly TCC [ENA] ¡û
>W141223505 BADI01000794 Betaproteobacteria Herbaspirillum sp. B65 [BADI] 1858 1785 - Gly TCC [ENA] ¡û
>WENV182540650 OJAO01000579 [OJAO] seawater metagenome; Sea water 1583 1510 - Gly TCC [ENA] ¢þ
>WENV182586742 OJHK01004085 [OJHK] seawater metagenome; Sea water 1638 1711 + Gly TCC [ENA] ¢þ
>W141277639 JAET01000001 Betaproteobacteria Dechloromonas agitata is5 [JAET] 533857 533784 - Gly TCC [ENA] ¡û
>WENV183703387 PDVJ01011818 [PDVJ] alkali sediment metagenome; glacial lake sediment 305 378 + Gly TCC [ENA] ¢þ
>WENV183703419 PDVJ01013299 [PDVJ] alkali sediment metagenome; glacial lake sediment 577 650 + Gly TCC [ENA] ¢þ
>WENV183738294 PJUD01152647 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 333 406 + Gly TCC [ENA] ¢þ
>WENV170007586 AMWB02142459 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 1132 1205 + Gly TCC [ENA] ¢þ
>WENV170007636 AMWB02147341 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 1170 1097 - Gly TCC [ENA] ¢þ
>WENV170201430 CEPQ01019873 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 261 188 - Gly TCC [ENA] ¢þ
>WENV170201643 CEPQ01041308 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 322 249 - Gly TCC [ENA] ¢þ
>WENV170227985 CEQF01160932 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 336 409 + Gly TCC [ENA] ¢þ
>WENV170573163 FLYJ01002197 [FLYJ] hot springs metagenome; Sediment 1708 1781 + Gly TCC [ENA] ¢þ
>WENV170639352 JFJP01002028 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 25549 25622 + Gly TCC [ENA] ¢þ
>WENV170653507 JRYJ01002963 [JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 10353 10426 + Gly TCC [ENA] ¢þ
>WENV170893156 MDTD01048511 [MDTD] marine metagenome; seawater 974 1047 + Gly TCC [ENA] ¢þ
>C181163946 CP028324 Betaproteobacteria Pseudoduganella armeniaca ZMN-3 [CP028324] 6145540 6145467 - Gly TCC - ¡û
>C191124223 CP034395 Betaproteobacteria Herbaspirillum seropedicae AU13965 [CP034395] 114871 114944 + Gly TCC - ¡û
>C191150812 CP036401 Betaproteobacteria Pseudoduganella albidiflava DSM 17472 [CP036401] 6539820 6539747 - Gly TCC - ¡û
>C191156611 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 149341 149414 + Gly TCC - ¡û
>W1910577882 JUGD01000045 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 14861 14934 + Gly TCC [ENA] ¡û
>W1910578312 JWJC01000017 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 432 359 - Gly TCC [ENA] ¡û
>W1910785821 MQVZ01000001 Betaproteobacteria Limnobacter sp. SAORIC-690 SAORIC-690 [MQVZ] 1358062 1358135 + Gly TCC [ENA] ¡û
>W1810194058 PKOI01000018 Betaproteobacteria Herbaspirillum sp. BH-1 [PKOI] 26749 26822 + Gly TCC [ENA] ¡û
>W1810195601 PKRR01000003 Betaproteobacteria Uliginosibacterium sp. TH139 [PKRR] 97770 97697 - Gly TCC [ENA] ¡û
>W1810659739 QJKI01000005 Betaproteobacteria Rivihabitans pingtungensis DSM 29661 [QJKI] 118728 118655 - Gly TCC [ENA] ¡û
>C151087558 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 110152 110225 + Gly TCC [Ensembl] ¡û
>W11114405 ADDK02000001 Betaproteobacteria Azospira oryzae PS [ADDK] 1157390 1157317 - Gly TCC [ENA] ¡û
>C161060431 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 127548 127621 + Gly TCC [Ensembl] ¡û
>WENV061679 AACY023437260 Marine microbial communities from Global Ocean Sampling (GOS) 830 903 + Gly TCC [ENA]
>W1610752954 LNDZ01000032 Betaproteobacteria Betaproteobacteria bacterium Ga0074130 [LNDZ] 80009 80082 + Gly TCC [ENA] ¡û
>W1610934869 LUJK01000043 Betaproteobacteria Limnobacter sp. CACIAM 66H1 [LUJK] 214 141 - Gly TCC [ENA] ¡û
>WENV080165 AATO01010583 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 205 132 - Gly TCC [ENA]
>W1710516924 FNCY01000001 Betaproteobacteria Propionivibrio dicarboxylicus [FNCY] 737481 737554 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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