tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.509917 (73 seq.)
>W1710889747 LNBC01000014 Alphaproteobacteria Paracoccus aminovorans [LNBC] 278967 279040 + Gly TCC [ENA] ¡û
>W131158915 AQUO01000001 Alphaproteobacteria Paracoccus sp. N5 [AQUO] 912334 912261 - Gly TCC [ENA] ¡û
>C171110786 CP020612 Alphaproteobacteria Paracoccus contaminans RKI 16-01929T [CP020612] 851320 851247 - Gly TCC - ¡û
>WENV180107142 OAPF01041037 [OAPF] marine metagenome; ENVO:00002010 283 210 - Gly TCC [ENA] ¢þ
>WENV180108086 OAPH01041292 [OAPH] marine metagenome; seawater 265 338 + Gly TCC [ENA] ¢þ
>WENV180357022 OBNM01006234 [OBNM] marine metagenome; none 305 232 - Gly TCC [ENA] ¢þ
>WENV180387007 OBPD01037888 [OBPD] marine metagenome; Sea Water 310 237 - Gly TCC [ENA] ¢þ
>WENV181164871 OEIR01424470 [OEIR] soil metagenome; soil 242 169 - Gly TCC [ENA] ¢þ
>W141216616 AZVA01000003 Alphaproteobacteria Paracoccus sp. J55 [AZVA] 3584 3511 - Gly TCC [ENA] ¡û
>W141277301 JAEM01000004 Alphaproteobacteria Paracoccus pantotrophus J46 [JAEM] 131073 131000 - Gly TCC [ENA] ¡û
>WENV183741333 PJUF01087258 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 215 288 + Gly TCC [ENA] ¢þ
>WENV170123062 CENO01016808 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 427 354 - Gly TCC [ENA] ¢þ
>WENV170123547 CENO01052935 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 944 871 - Gly TCC [ENA] ¢þ
>WENV170137573 CENW01040401 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 117 - Gly TCC [ENA] ¢þ
>WENV170159709 CEOK01085060 [CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1930 2003 + Gly TCC [ENA] ¢þ
>WENV170160586 CEOK01160573 [CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 269 342 + Gly TCC [ENA] ¢þ
>WENV170173439 CEOQ01211381 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 309 236 - Gly TCC [ENA] ¢þ
>WENV170194900 CEPJ01079544 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1846 1773 - Gly TCC [ENA] ¢þ
>WENV170199508 CEPL01124409 [CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2253 2326 + Gly TCC [ENA] ¢þ
>WENV170367449 CETP01051877 [CETP] marine metagenome genome assembly TARA_122_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 212 139 - Gly TCC [ENA] ¢þ
>WENV170391158 CEUA01206755 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 610 683 + Gly TCC [ENA] ¢þ
>WENV170473379 CEVH01029389 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1985 2058 + Gly TCC [ENA] ¢þ
>WENV170473593 CEVH01051487 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 274 + Gly TCC [ENA] ¢þ
>WENV170477375 CEVJ01065629 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1651 1578 - Gly TCC [ENA] ¢þ
>WENV170478519 CEVK01059355 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1637 1710 + Gly TCC [ENA] ¢þ
>WENV170482383 CEVM01025948 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1196 1269 + Gly TCC [ENA] ¢þ
>W141428506 JENY01000010 Alphaproteobacteria Aquamicrobium defluvii [JENY] 138507 138580 + Gly TCC [ENA] ¡û
>WENV170500634 CEVU01031920 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 153 80 - Gly TCC [ENA] ¢þ
>WENV170506538 CEVW01260945 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 273 346 + Gly TCC [ENA] ¢þ
>WENV170551380 CXWJ01006034 [CXWJ] wastewater metagenome; activated sludge 436 363 - Gly TCC [ENA] ¢þ
>WENV170552562 CXWK01000402 [CXWK] wastewater metagenome; activated sludge 123603 123530 - Gly TCC [ENA] ¢þ
>WENV170650805 JRYE01023295 [JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO 3729 3802 + Gly TCC [ENA] ¢þ
>WENV170652245 JRYH01000243 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 83519 83592 + Gly TCC [ENA] ¢þ
>WENV170652393 JRYH01002063 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 11168 11241 + Gly TCC [ENA] ¢þ
>WENV170652571 JRYH01006887 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 6085 6012 - Gly TCC [ENA] ¢þ
>WENV170652796 JRYH01030564 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 80 7 - Gly TCC [ENA] ¢þ
>WENV170654766 JRYL01014723 [JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different 70 -1 - Gly TCC [ENA] ¢þ
>WENV170655001 JTFN01001468 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 24 97 + Gly TCC [ENA] ¢þ
>WENV170655214 JTFN01011736 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 2193 2120 - Gly TCC [ENA] ¢þ
>WENV170655668 JTFN01056170 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 79 6 - Gly TCC [ENA] ¢þ
>WENV170699754 LGVF01647586 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 340 413 + Gly TCC [ENA] ¢þ
>WENV170741928 LULT01015894 [LULT] marine metagenome; Red Sea water column Station 108 - depth 100m 471 544 + Gly TCC [ENA] ¢þ
>WENV170769722 LXNH01066696 [LXNH] seawater metagenome; marine seawater 617 690 + Gly TCC [ENA] ¢þ
>WENV170799017 MDSV01206377 [MDSV] marine metagenome; seawater 539 466 - Gly TCC [ENA] ¢þ
>WENV170859510 MDTB01037151 [MDTB] marine metagenome; seawater 12999 12926 - Gly TCC [ENA] ¢þ
>WENV170862123 MDTB01073555 [MDTB] marine metagenome; seawater 2066 2139 + Gly TCC [ENA] ¢þ
>WENV170864086 MDTB01100533 [MDTB] marine metagenome; seawater 1090 1017 - Gly TCC [ENA] ¢þ
>WENV170869134 MDTB01171880 [MDTB] marine metagenome; seawater 2498 2571 + Gly TCC [ENA] ¢þ
>WENV170870244 MDTB01188893 [MDTB] marine metagenome; seawater 78 151 + Gly TCC [ENA] ¢þ
>WENV170872291 MDTB01216414 [MDTB] marine metagenome; seawater 4768 4841 + Gly TCC [ENA] ¢þ
>WENV170873195 MDTB01228845 [MDTB] marine metagenome; seawater 2029 1956 - Gly TCC [ENA] ¢þ
>C181099799 CP024422 Alphaproteobacteria Paracoccus yeei TT13 [CP024422] 1666256 1666183 - Gly TCC - ¡û
>C181116762 CP025408 Alphaproteobacteria Paracoccus tegillarcae BM15 [CP025408] 527228 527301 + Gly TCC - ¡û
>C181203407 LN832559 Alphaproteobacteria Paracoccus aminovorans [LN832559] 2607180 2607107 - Gly TCC - ¡û
>C191073610 CP031078 Alphaproteobacteria Paracoccus yeei CCUG 32053 [CP031078] 298850 298777 - Gly TCC - ¡û
>W1910236463 FPHO01000002 Alphaproteobacteria Hyphomicrobium sp. CS1GBMeth3 [FPHO] 1358419 1358346 - Gly TCC [ENA] ¡û
>C141010511 CP006912 Alphaproteobacteria Hyphomicrobium nitrativorans NL23 [CP006912] 2957447 2957374 - Gly TCC [Ensembl] ¡û
>W1911705500 QOKZ01000001 Alphaproteobacteria Paracoccus alkanivorans 4·î2Æü [QOKZ] 719105 719178 + Gly TCC [ENA] ¡û
>W1810116086 PHNO01001516 Alphaproteobacteria Amaricoccus sp. HAR-UPW-R2A-40 [PHNO] 175 102 - Gly TCC [ENA] ¡û
>W1810585327 QFCQ01000089 Alphaproteobacteria Paracoccus thiocyanatus SST [QFCQ] 2385 2312 - Gly TCC [ENA] ¡û
>W1810679188 QKPN01000001 Alphaproteobacteria Rhodobacteraceae bacterium DSL-40 [QKPN] 68575 68502 - Gly TCC [ENA] ¡û
>W1810697101 QLUV01000001 Alphaproteobacteria Paracoccus endophyticus SYSUP0003 [QLUV] 463851 463924 + Gly TCC [ENA] ¡û
>W1810762308 QPML01000009 Alphaproteobacteria Paracoccus versutus MAL 1HM19 [QPML] 186267 186194 - Gly TCC [ENA] ¡û
>W1511348592 JRKO01000004 Alphaproteobacteria Paracoccus versutus DSM 582 [JRKO] 92657 92730 + Gly TCC [ENA] ¡û
>W1511348663 JRKP01000080 Alphaproteobacteria Paracoccus sanguinis 39524 [JRKP] 11335 11262 - Gly TCC [ENA] ¡û
>W1511348808 JRKS01000113 Alphaproteobacteria Paracoccus sphaerophysae HAMBI 3106 [JRKS] 1979 1906 - Gly TCC [ENA] ¡û
>W1610750125 LNBC01000014 Alphaproteobacteria Paracoccus aminovorans [LNBC] 278967 279040 + Gly TCC [ENA] ¡û
>W1710513622 FNAH01000006 Alphaproteobacteria Paracoccus isoporae [FNAH] 95672 95745 + Gly TCC [ENA] ¡û
>W1710521155 FNGE01000001 Alphaproteobacteria Paracoccus chinensis [FNGE] 220327 220254 - Gly TCC [ENA] ¡û
>W1710540954 FNXG01000003 Alphaproteobacteria Paracoccus alkenifer [FNXG] 209561 209488 - Gly TCC [ENA] ¡û
>W1710563601 FOPU01000031 Alphaproteobacteria Paracoccus aminovorans [FOPU] 1691 1618 - Gly TCC [ENA] ¡û
>W1710599558 FTOU01000031 Alphaproteobacteria Paracoccus saliphilus [FTOU] 20294 20367 + Gly TCC [ENA] ¡û
>W1710608109 FXAQ01000003 Alphaproteobacteria Paracoccus sp. J56 [FXAQ] 74332 74405 + Gly TCC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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