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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.56098 (127 seq.)
>W1710872035
LMLR01000010
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
218824
218739
-
Ser
GGA
[ENA]
¡û
>W1710875358
LMOI01000002
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
204387
204300
-
Ser
GGA
[ENA]
¡û
>W1710875499
LMOL01000001
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
26709
26622
-
Ser
GGA
[ENA]
¡û
>W1710875625
LMON01000026
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
133517
133432
-
Ser
GGA
[ENA]
¡û
>W1710876300
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
207180
207095
-
Ser
GGA
[ENA]
¡û
>W1710880048
LMSB01000034
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
207407
207320
-
Ser
GGA
[ENA]
¡û
>W1710880277
LMSF01000028
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
67961
67874
-
Ser
GGA
[ENA]
¡û
>W1710880334
LMSG01000022
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
18689
18602
-
Ser
GGA
[ENA]
¡û
>W1710880352
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
172120
172035
-
Ser
GGA
[ENA]
¡û
>W1710880434
LMSI01000023
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
130326
130413
+
Ser
GGA
[ENA]
¡û
>W1710909455
LNQM01000007
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
194291
194204
-
Ser
GGA
[ENA]
¡û
>W1710916088
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
51744
51829
+
Ser
GGA
[ENA]
¡û
>W1710916217
LNUV01000006
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
105960
106047
+
Ser
GGA
[ENA]
¡û
>W1710995750
LQAP01000009
Actinomycetota
Arthrobacter sp. B6 [LQAP]
248390
248303
-
Ser
GGA
[ENA]
¡û
>W1711124370
LUKB01000001
Actinomycetota
Arthrobacter sp. D2 [LUKB]
104286
104371
+
Ser
GGA
[ENA]
¡û
>W1711124459
LUKC01000067
Actinomycetota
Arthrobacter sp. D4 [LUKC]
103958
104043
+
Ser
GGA
[ENA]
¡û
>W1711184052
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
822495
822582
+
Ser
GGA
[ENA]
¡û
>W1711724072
MTPV01000038
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
5840
5755
-
Ser
GGA
[ENA]
¡û
>W1711768811
MVDG01000014
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
15214
15127
-
Ser
GGA
[ENA]
¡û
>W1711853220
MYFE01000143
Actinomycetota
Arthrobacter globiformis [MYFE]
5726
5813
+
Ser
GGA
[ENA]
¡û
>C171040591
CP015732
Actinomycetota
Arthrobacter sp. U41 [CP015732]
1809508
1809593
+
Ser
GGA
-
¡û
>C171062253
CP017421
Actinomycetota
Arthrobacter sp. ZXY-2 [CP017421]
3463566
3463481
-
Ser
GGA
-
¡û
>C171092016
CP019304
Actinomycetota
Arthrobacter sp. QXT-31 [CP019304]
1670595
1670508
-
Ser
GGA
-
¡û
>W131089948
AOFD01000037
Actinomycetota
Arthrobacter nitrophenolicus SJCon [AOFD]
2105
2192
+
Ser
GGA
[ENA]
¡û
>W131172030
ARGQ01000025
Actinomycetota
Arthrobacter sp. 135MFCol5.1 [ARGQ]
125687
125774
+
Ser
GGA
[ENA]
¡û
>W131172153
ARGS01000028
Actinomycetota
Arthrobacter sp. 162MFSha1.1 [ARGS]
28522
28609
+
Ser
GGA
[ENA]
¡û
>W131172219
ARGT01000023
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
227475
227390
-
Ser
GGA
[ENA]
¡û
>W131172272
ARGU01000041
Actinomycetota
Arthrobacter sp. 161MFSha2.1 [ARGU]
248208
248123
-
Ser
GGA
[ENA]
¡û
>W131237732
AUPJ01000455
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
1540
1625
+
Ser
GGA
[ENA]
¡û
>C000050
CP000474
Actinomycetota
Paenarthrobacter aurescens TC1 [CP000474]
688080
688167
+
Ser
GGA
[Ensembl]
¡û
>C000990
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
596911
596995
+
Ser
GGA
[Ensembl]
¡û
>WENV180028491
FTJB01051212
[FTJB] metagenome; soil
29
115
+
Ser
GGA
[ENA]
¢þ
>W141065987
AQRI01000006
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
217448
217533
+
Ser
GGA
[ENA]
¡û
>W141106067
AVPD01000005
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
117642
117557
-
Ser
GGA
[ENA]
¡û
>WENV181191694
OEPS010167380
[OEPS] soil metagenome; soil
217
303
+
Ser
GGA
[ENA]
¢þ
>W08008059
ABKU01000012
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [ABKU]
25796
25712
-
Ser
GGA
[ENA]
¡û
>W141213511
AZSB01000140
Actinomycetota
Arthrobacter sp. I3 [AZSB]
89
174
+
Ser
GGA
[ENA]
¡û
>W141216736
AZVC01000012
Actinomycetota
Paenarthrobacter nicotinovorans 231Sha2.1M6 [AZVC]
55490
55575
+
Ser
GGA
[ENA]
¡û
>W141217170
AZVJ01000022
Actinomycetota
Paenarthrobacter nicotinovorans 26Cvi1.1E [AZVJ]
17530
17445
-
Ser
GGA
[ENA]
¡û
>W141246991
CAQI01000053
Actinomycetota
Pseudarthrobacter siccitolerans [CAQI]
86695
86608
-
Ser
GGA
[ENA]
¡û
>W141278860
JAFW01000001
Actinomycetota
Arthrobacter sp. 31Y [JAFW]
3096049
3096136
+
Ser
GGA
[ENA]
¡û
>C181000300
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
464943
465030
+
Ser
GGA
-
¡û
>C181064955
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
733054
733139
+
Ser
GGA
-
¡û
>C181134204
CP026514
Actinomycetota
Arthrobacter sp. PGP41 [CP026514]
566917
567003
+
Ser
GGA
-
¡û
>W09102028
AAHG01000001
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
459074
458989
-
Ser
GGA
[ENA]
¡û
>C191164659
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
177684
177599
-
Ser
GGA
-
¡û
>C191174042
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
662089
662174
+
Ser
GGA
-
¡û
>C191188259
CP041187
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502771 [CP041187]
432891
432805
-
Ser
GGA
-
¡û
>C191188267
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
1101181
1101268
+
Ser
GGA
-
¡û
>C191188536
CP041198
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502770 [CP041198]
4374733
4374820
+
Ser
GGA
-
¡û
>W141565182
JIBJ01000002
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
164829
164744
-
Ser
GGA
[ENA]
¡û
>W141702040
JMLE01000048
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
2406
2491
+
Ser
GGA
[ENA]
¡û
>W1910181579
BJMD01000009
Actinomycetota
Paenarthrobacter aurescens NBRC 12136 [BJMD]
128563
128477
-
Ser
GGA
[ENA]
¡û
>C09100255
CP001341
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [CP001341]
737910
737997
+
Ser
GGA
[Ensembl]
¡û
>W1911532728
OIVI01000250
Actinomycetota
Arthrobacter alpinus [OIVI]
128786
128871
+
Ser
GGA
[ENA]
¡û
>W1911566806
PCPC01000016
Actinomycetota
Arthrobacter sp. MYb51 [PCPC]
110288
110202
-
Ser
GGA
[ENA]
¡û
>W1911567579
PCPR01000016
Actinomycetota
Arthrobacter sp. MYb23 [PCPR]
9702
9788
+
Ser
GGA
[ENA]
¡û
>W1911798248
QYLP01000034
Actinomycetota
Arthrobacter celericrescens NEAU-SA2 [QYLP]
27739
27824
+
Ser
GGA
[ENA]
¡û
>W1810167248
PJII01000003
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
182603
182517
-
Ser
GGA
[ENA]
¡û
>W1810167355
PJIK01000013
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
100324
100237
-
Ser
GGA
[ENA]
¡û
>W1810167401
PJIL01000007
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
207765
207680
-
Ser
GGA
[ENA]
¡û
>W1810167898
PJIV01000011
Actinomycetota
Arthrobacter sp. 9E14 [PJIV]
119325
119411
+
Ser
GGA
[ENA]
¡û
>W1810167940
PJIW01000014
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
40644
40731
+
Ser
GGA
[ENA]
¡û
>W1810171964
PJMB01000005
Actinomycetota
Arthrobacter sp. AFG7.2 [PJMB]
167147
167233
+
Ser
GGA
[ENA]
¡û
>W1810172016
PJMC01000008
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
186269
186182
-
Ser
GGA
[ENA]
¡û
>W1810296168
PTJB01000012
Actinomycetota
Arthrobacter sp. B3 [PTJB]
69767
69681
-
Ser
GGA
[ENA]
¡û
>W1810368347
PVZO01000008
Actinomycetota
Arthrobacter woluwensis NM-35 [PVZO]
147861
147774
-
Ser
GGA
[ENA]
¡û
>W1810424181
PYUI01000011
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
125918
125833
-
Ser
GGA
[ENA]
¡û
>W1810474986
QAIQ01000715
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
671
756
+
Ser
GGA
[ENA]
¡û
>W1810569979
QEHL01000016
Actinomycetota
Pseudarthrobacter sp. AG30 [QEHL]
93743
93829
+
Ser
GGA
[ENA]
¡û
>W1810676815
QKMG01000006
Actinomycetota
Paenarthrobacter nicotinovorans 25_8 [QKMG]
18269
18354
+
Ser
GGA
[ENA]
¡û
>W1810677251
QKMO01000007
Actinomycetota
Arthrobacter sp. RC1.1 241 [QKMO]
115304
115391
+
Ser
GGA
[ENA]
¡û
>W1810695543
QLNP01000034
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
15956
16043
+
Ser
GGA
[ENA]
¡û
>W1810707040
QMKP01000004
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
61873
61960
+
Ser
GGA
[ENA]
¡û
>W1810786772
QRCU01000059
Actinomycetota
Arthrobacter silvisoli NEAU-SA1 [QRCU]
39071
39156
+
Ser
GGA
[ENA]
¡û
>W1810789470
QRGQ01000040
Actinomycetota
Arthrobacter sp. RT-1 [QRGQ]
253651
253737
+
Ser
GGA
[ENA]
¡û
>W1510018508
BBUD01000469
Actinomycetota
Arthrobacter sp. Hiyo1 [BBUD]
2101
2186
+
Ser
GGA
[ENA]
¡û
>W1510018540
BBUE01000181
Actinomycetota
Arthrobacter sp. Hiyo6 [BBUE]
2094
2179
+
Ser
GGA
[ENA]
¡û
>C11100988
CP002379
Actinomycetota
Pseudarthrobacter phenanthrenivorans Sphe3 [CP002379]
597013
597100
+
Ser
GGA
[Ensembl]
¡û
>W1510641741
CVLG01000001
Actinomycetota
Paenarthrobacter nitroguajacolicus HG [CVLG]
1063492
1063577
+
Ser
GGA
[ENA]
¡û
>W1511319605
JPZK01000013
Actinomycetota
Arthrobacter sp. MWB30 [JPZK]
18351
18436
+
Ser
GGA
[ENA]
¡û
>W1511489591
JWTB01000003
Actinomycetota
Pseudarthrobacter phenanthrenivorans SWC37 [JWTB]
16685
16772
+
Ser
GGA
[ENA]
¡û
>W1511523704
JYCN01000004
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
182478
182563
+
Ser
GGA
[ENA]
¡û
>W1511551615
JZTW01000002
Actinomycetota
Pseudarthrobacter chlorophenolicus Mor30.16 [JZTW]
161920
161833
-
Ser
GGA
[ENA]
¡û
>W1511685700
LFQH01000060
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
26588
26501
-
Ser
GGA
[ENA]
¡û
>C161060750
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
1684797
1684710
-
Ser
GGA
[Ensembl]
¡û
>C161068048
CP014196
Actinomycetota
Arthrobacter sp. ATCC 21022 [CP014196]
614004
614089
+
Ser
GGA
-
¡û
>W121086804
AKKK01000011
Actinomycetota
Arthrobacter sp. M2012083 [AKKK]
84930
84845
-
Ser
GGA
[ENA]
¡û
>W121123790
BAEG01000014
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
34955
35042
+
Ser
GGA
[ENA]
¡û
>W1610067363
BCQN01000005
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
38568
38655
+
Ser
GGA
[ENA]
¡û
>W1610081900
BDDW01000008
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
92291
92206
-
Ser
GGA
[ENA]
¡û
>C131002299
CP003203
Actinomycetota
Arthrobacter sp. Rue61a [CP003203]
657976
658063
+
Ser
GGA
[Ensembl]
¡û
>W1610515437
FMAZ01000006
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
194291
194204
-
Ser
GGA
[ENA]
¡û
>W1610527128
JPWK01000022
Actinomycetota
Arthrobacter sp. ATCC 21022 ATCC 21022 KY 3901 [JPWK]
77799
77714
-
Ser
GGA
[ENA]
¡û
>W1610734381
LMLR01000010
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
218824
218739
-
Ser
GGA
[ENA]
¡û
>W1610737704
LMOI01000002
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
204387
204300
-
Ser
GGA
[ENA]
¡û
>W1610737845
LMOL01000001
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
26709
26622
-
Ser
GGA
[ENA]
¡û
>W1610737971
LMON01000026
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
133517
133432
-
Ser
GGA
[ENA]
¡û
>W1610738646
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
207180
207095
-
Ser
GGA
[ENA]
¡û
>W1610742394
LMSB01000034
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
207407
207320
-
Ser
GGA
[ENA]
¡û
>W1610742623
LMSF01000028
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
67961
67874
-
Ser
GGA
[ENA]
¡û
>W1610742680
LMSG01000022
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
18689
18602
-
Ser
GGA
[ENA]
¡û
>W1610742698
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
172120
172035
-
Ser
GGA
[ENA]
¡û
>W1610742780
LMSI01000023
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
130326
130413
+
Ser
GGA
[ENA]
¡û
>W1610767814
LNQM01000007
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
194291
194204
-
Ser
GGA
[ENA]
¡û
>W1610774327
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
51744
51829
+
Ser
GGA
[ENA]
¡û
>W1610774456
LNUV01000006
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
105960
106047
+
Ser
GGA
[ENA]
¡û
>W1610850407
LQAP01000009
Actinomycetota
Arthrobacter sp. B6 [LQAP]
248390
248303
-
Ser
GGA
[ENA]
¡û
>W1610989934
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
822495
822582
+
Ser
GGA
[ENA]
¡û
>W1710064736
BCQN01000005
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
38568
38655
+
Ser
GGA
[ENA]
¡û
>W1710080615
BDDW01000008
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
92291
92206
-
Ser
GGA
[ENA]
¡û
>W1710084510
BDMH01000005
Actinomycetota
Paenarthrobacter ureafaciens KI72 [BDMH]
111038
111123
+
Ser
GGA
[ENA]
¡û
>W1710501127
FMAZ01000006
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
194291
194204
-
Ser
GGA
[ENA]
¡û
>W1710508523
FMWE01000006
Actinomycetota
Arthrobacter sp. UNCCL28 [FMWE]
243643
243558
-
Ser
GGA
[ENA]
¡û
>W1710518936
FNEI01000015
Actinomycetota
Arthrobacter cupressi [FNEI]
21475
21390
-
Ser
GGA
[ENA]
¡û
>W1710521083
FNGC01000008
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
237967
237882
-
Ser
GGA
[ENA]
¡û
>W1710521127
FNGD01000005
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
288982
289067
+
Ser
GGA
[ENA]
¡û
>W1710525680
FNJS01000030
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
35360
35445
+
Ser
GGA
[ENA]
¡û
>W1710527695
FNLE01000003
Actinomycetota
Pseudarthrobacter chlorophenolicus [FNLE]
53625
53538
-
Ser
GGA
[ENA]
¡û
>W1710529025
FNNR01000007
Actinomycetota
Arthrobacter sp. cf158 [FNNR]
264488
264403
-
Ser
GGA
[ENA]
¡û
>W1710535445
FNSN01000004
Actinomycetota
Arthrobacter woluwensis [FNSN]
216808
216721
-
Ser
GGA
[ENA]
¡û
>W1710541451
FNYI01000008
Actinomycetota
Arthrobacter sp. yr096 [FNYI]
81272
81357
+
Ser
GGA
[ENA]
¡û
>W1710550093
FOEZ01000012
Actinomycetota
Arthrobacter sp. OV608 [FOEZ]
126714
126801
+
Ser
GGA
[ENA]
¡û
>W1710577631
FPAY01000003
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
222692
222607
-
Ser
GGA
[ENA]
¡û
>W1710603444
FUZB01000005
Actinomycetota
Arthrobacter sp. 31Cvi3.1E [FUZB]
260520
260435
-
Ser
GGA
[ENA]
¡û
>W1710603543
FUZD01000022
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
20517
20432
-
Ser
GGA
[ENA]
¡û
>W1710605046
FVZL01000012
Actinomycetota
Arthrobacter sp. P2b [FVZL]
69767
69680
-
Ser
GGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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