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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.59664 (207 seq.)
>W1710782902
LJFJ01000006
Bacillota
Limosilactobacillus fermentum [LJFJ]
214100
214186
+
Leu
CAG
[ENA]
¡û
>W1710801581
LJWZ01000028
Bacillota
Limosilactobacillus fermentum [LJWZ]
20599
20685
+
Leu
CAG
[ENA]
¡û
>W1711185518
LWNM01000025
Bacillota
Lactobacillus sp. HMSC24D01 [LWNM]
352
266
-
Leu
CAG
[ENA]
¡û
>W1711487616
MKGE01000011
Bacillota
Limosilactobacillus fermentum [MKGE]
141168
141254
+
Leu
CAG
[ENA]
¡û
>W1712106941
NIWV01000091
Bacillota
Limosilactobacillus fermentum [NIWV]
533
448
-
Leu
CAG
[ENA]
¡û
>C171057895
CP017151
Bacillota
Limosilactobacillus fermentum NCC2970 [CP017151]
1319875
1319961
+
Leu
CAG
-
¡û
>C171088298
CP019030
Bacillota
Limosilactobacillus fermentum SNUV175 [CP019030]
593620
593535
-
Leu
CAG
-
¡û
>C171115621
CP021104
Bacillota
Limosilactobacillus fermentum FTDC 8312 [CP021104]
456627
456713
+
Leu
CAG
-
¡û
>C171123319
CP021790
Bacillota
Limosilactobacillus fermentum LAC FRN-92 [CP021790]
8094
8008
-
Leu
CAG
-
¡û
>W131203198
ASXU01000114
Bacillota
Limosilactobacillus fermentum FTDC8312 [ASXU]
12503
12589
+
Leu
CAG
[ENA]
¡û
>WENV180152802
OAUQ01093481
[OAUQ] human gut metagenome; faeces
79
164
+
Leu
CAG
[ENA]
¢þ
>WENV180196001
OAZZ01013701
[OAZZ] human gut metagenome; faeces
318
403
+
Leu
CAG
[ENA]
¢þ
>WENV180334484
OBLF01015051
[OBLF] metagenome; feces
377
293
-
Leu
CAG
[ENA]
¢þ
>WENV180410581
OBUX01000352
[OBUX] human gut metagenome; faeces
14098
14182
+
Leu
CAG
[ENA]
¢þ
>WENV180442296
OBWW01036130
[OBWW] human gut metagenome; faeces
286
201
-
Leu
CAG
[ENA]
¢þ
>WENV180547483
OCIU01041007
[OCIU] human gut metagenome; human gut
861
776
-
Leu
CAG
[ENA]
¢þ
>WENV180576404
OCLZ01005054
[OCLZ] human gut metagenome; human gut
821
736
-
Leu
CAG
[ENA]
¢þ
>WENV180822779
ODJV01001380
[ODJV] human metagenome; G_DNA_Posterior fornix
708
623
-
Leu
CAG
[ENA]
¢þ
>W141092473
AVAB01000001
Bacillota
Limosilactobacillus fermentum MTCC 8711 [AVAB]
434367
434452
+
Leu
CAG
[ENA]
¡û
>W141094634
AVCT01000091
Bacillota
Limosilactobacillus fermentum 3872 [AVCT]
2031
2117
+
Leu
CAG
[ENA]
¡û
>WENV181200877
OERL01021269
[OERL] metagenome; Caecal content
522
607
+
Leu
CAG
[ENA]
¢þ
>WENV181394329
OFRY01054897
[OFRY] human gut metagenome; human gut
238
323
+
Leu
CAG
[ENA]
¢þ
>WENV181457211
OGEH01021842
[OGEH] metagenome; Human gut stool
152
67
-
Leu
CAG
[ENA]
¢þ
>WENV181458343
OGEJ01008942
[OGEJ] metagenome; Human gut stool
690
774
+
Leu
CAG
[ENA]
¢þ
>WENV181463943
OGEP01000029
[OGEP] metagenome; Human gut stool
152594
152679
+
Leu
CAG
[ENA]
¢þ
>WENV181467898
OGES01000055
[OGES] metagenome; Human gut stool
92389
92304
-
Leu
CAG
[ENA]
¢þ
>WENV181467899
OGES01000055
[OGES] metagenome; Human gut stool
92272
92187
-
Leu
CAG
[ENA]
¢þ
>WENV181472630
OGEZ01004570
[OGEZ] metagenome; Human gut stool
2452
2537
+
Leu
CAG
[ENA]
¢þ
>WENV181473688
OGFC01000079
[OGFC] metagenome; Human gut stool
282
197
-
Leu
CAG
[ENA]
¢þ
>WENV181473689
OGFC01000079
[OGFC] metagenome; Human gut stool
165
80
-
Leu
CAG
[ENA]
¢þ
>WENV181481017
OGFI01000093
[OGFI] metagenome; Human gut stool
77284
77199
-
Leu
CAG
[ENA]
¢þ
>WENV181481018
OGFI01000093
[OGFI] metagenome; Human gut stool
77167
77082
-
Leu
CAG
[ENA]
¢þ
>W141148181
AWXS01000043
Bacillota
Limosilactobacillus fermentum Lf1 [AWXS]
66465
66551
+
Leu
CAG
[ENA]
¡û
>WENV181502134
OGGI01005557
[OGGI] metagenome; Human gut stool
85
170
+
Leu
CAG
[ENA]
¢þ
>WENV181502180
OGGI01007178
[OGGI] metagenome; Human gut stool
4162
4247
+
Leu
CAG
[ENA]
¢þ
>WENV181506522
OGGM01009556
[OGGM] metagenome; Human gut stool
801
716
-
Leu
CAG
[ENA]
¢þ
>WENV181516773
OGGZ01000378
[OGGZ] metagenome; Human gut stool
19301
19386
+
Leu
CAG
[ENA]
¢þ
>WENV181519222
OGHB01024013
[OGHB] metagenome; Human gut stool
481
565
+
Leu
CAG
[ENA]
¢þ
>WENV181537277
OGHW01004736
[OGHW] metagenome; Human gut stool
85
170
+
Leu
CAG
[ENA]
¢þ
>WENV181537278
OGHW01004736
[OGHW] metagenome; Human gut stool
202
287
+
Leu
CAG
[ENA]
¢þ
>WENV181541407
OGIC01031902
[OGIC] metagenome; Human gut stool
463
378
-
Leu
CAG
[ENA]
¢þ
>WENV181552865
OGIQ01000031
[OGIQ] metagenome; Human gut stool
52733
52648
-
Leu
CAG
[ENA]
¢þ
>WENV181552866
OGIQ01000031
[OGIQ] metagenome; Human gut stool
52616
52531
-
Leu
CAG
[ENA]
¢þ
>WENV181553176
OGIQ01005465
[OGIQ] metagenome; Human gut stool
650
566
-
Leu
CAG
[ENA]
¢þ
>WENV181555626
OGIU01000001
[OGIU] metagenome; Human gut stool
80983
80898
-
Leu
CAG
[ENA]
¢þ
>WENV181555627
OGIU01000001
[OGIU] metagenome; Human gut stool
80866
80781
-
Leu
CAG
[ENA]
¢þ
>WENV181556564
OGIV01000003
[OGIV] metagenome; Human gut stool
88358
88273
-
Leu
CAG
[ENA]
¢þ
>WENV181558602
OGIX01007465
[OGIX] metagenome; Human gut stool
171
86
-
Leu
CAG
[ENA]
¢þ
>WENV181564599
OGJH01012791
[OGJH] metagenome; Human gut stool
197
281
+
Leu
CAG
[ENA]
¢þ
>WENV181567643
OGJJ01019666
[OGJJ] metagenome; Human gut stool
1507
1422
-
Leu
CAG
[ENA]
¢þ
>WENV181570737
OGJO01000004
[OGJO] metagenome; Human gut stool
129007
128922
-
Leu
CAG
[ENA]
¢þ
>WENV181574312
OGJT01000029
[OGJT] metagenome; Human gut stool
123078
122993
-
Leu
CAG
[ENA]
¢þ
>WENV181574313
OGJT01000029
[OGJT] metagenome; Human gut stool
122960
122875
-
Leu
CAG
[ENA]
¢þ
>WENV181574325
OGJT01000038
[OGJT] metagenome; Human gut stool
164
79
-
Leu
CAG
[ENA]
¢þ
>WENV181576587
OGJV01026305
[OGJV] metagenome; Human gut stool
665
580
-
Leu
CAG
[ENA]
¢þ
>WENV181587997
OGKH01000277
[OGKH] metagenome; Human gut stool
37626
37711
+
Leu
CAG
[ENA]
¢þ
>WENV181588638
OGKJ01000268
[OGKJ] metagenome; Human gut stool
7406
7321
-
Leu
CAG
[ENA]
¢þ
>WENV181589733
OGKM01000071
[OGKM] metagenome; Human gut stool
83587
83502
-
Leu
CAG
[ENA]
¢þ
>WENV181589734
OGKM01000071
[OGKM] metagenome; Human gut stool
83469
83384
-
Leu
CAG
[ENA]
¢þ
>WENV181671361
OGON01000920
[OGON] human gut metagenome; faeces
21953
21868
-
Leu
CAG
[ENA]
¢þ
>WENV181671547
OGON01002556
[OGON] human gut metagenome; faeces
140
55
-
Leu
CAG
[ENA]
¢þ
>W141180744
AYHA01000081
Bacillota
Limosilactobacillus fermentum NB-22 [AYHA]
20477
20563
+
Leu
CAG
[ENA]
¡û
>WENV181896123
OGXS01000028
[OGXS] human gut metagenome; faeces
65319
65404
+
Leu
CAG
[ENA]
¢þ
>WENV181896124
OGXS01000028
[OGXS] human gut metagenome; faeces
65436
65521
+
Leu
CAG
[ENA]
¢þ
>WENV182404045
OIEU01001821
[OIEU] human gut metagenome; human gut
294
210
-
Leu
CAG
[ENA]
¢þ
>W141244292
CAKF01000019
Bacillota
Limosilactobacillus ingluviei str. Autruche 4 [CAKF]
32746
32661
-
Leu
CAG
[ENA]
¡û
>W141244294
CAKF01000019
Bacillota
Limosilactobacillus ingluviei str. Autruche 4 [CAKF]
32459
32374
-
Leu
CAG
[ENA]
¡û
>WENV182488283
OIRZ01001972
[OIRZ] human gut metagenome; human gut
1975
2059
+
Leu
CAG
[ENA]
¢þ
>WENV182495465
OITA01026260
[OITA] human gut metagenome; human gut
339
255
-
Leu
CAG
[ENA]
¢þ
>WENV182505603
OIUY01000169
[OIUY] human gut metagenome; human gut
6367
6283
-
Leu
CAG
[ENA]
¢þ
>WENV182507619
OIVM01005001
[OIVM] human gut metagenome; human gut
423
339
-
Leu
CAG
[ENA]
¢þ
>WENV182889202
OKSF01000003
[OKSF] human gut metagenome; faeces
214405
214321
-
Leu
CAG
[ENA]
¢þ
>WENV182954463
OKWA01001700
[OKWA] human gut metagenome; human gut
6685
6769
+
Leu
CAG
[ENA]
¢þ
>C08006043
AP008937
Bacillota
Limosilactobacillus fermentum IFO 3956 [AP008937]
434125
434211
+
Leu
CAG
[Ensembl]
¡û
>WENV182975978
OKXY01000894
[OKXY] human gut metagenome; human gut
2240
2156
-
Leu
CAG
[ENA]
¢þ
>WENV183007698
OLDJ01001164
[OLDJ] human gut metagenome; human gut
2906
2822
-
Leu
CAG
[ENA]
¢þ
>WENV183010499
OLDW01001154
[OLDW] human gut metagenome; human gut
3229
3313
+
Leu
CAG
[ENA]
¢þ
>WENV183011014
OLDY01001551
[OLDY] human gut metagenome; human gut
708
792
+
Leu
CAG
[ENA]
¢þ
>WENV183011833
OLEA01002350
[OLEA] human gut metagenome; human gut
2165
2249
+
Leu
CAG
[ENA]
¢þ
>WENV183015076
OLEN01000806
[OLEN] human gut metagenome; human gut
1138
1222
+
Leu
CAG
[ENA]
¢þ
>WENV183018773
OLFA01001750
[OLFA] human gut metagenome; human gut
3257
3341
+
Leu
CAG
[ENA]
¢þ
>WENV183166549
OLOY01000208
[OLOY] human gut metagenome; faeces
108
23
-
Leu
CAG
[ENA]
¢þ
>WENV183166550
OLOY01000209
[OLOY] human gut metagenome; faeces
52998
52913
-
Leu
CAG
[ENA]
¢þ
>WENV183166551
OLOY01000209
[OLOY] human gut metagenome; faeces
52881
52796
-
Leu
CAG
[ENA]
¢þ
>WENV183182302
OLPK01000135
[OLPK] human gut metagenome; faeces
171
86
-
Leu
CAG
[ENA]
¢þ
>WENV183182323
OLPK01000163
[OLPK] human gut metagenome; faeces
83611
83526
-
Leu
CAG
[ENA]
¢þ
>WENV183205661
OLPZ01025023
[OLPZ] human gut metagenome; faeces
1570
1485
-
Leu
CAG
[ENA]
¢þ
>WENV183217243
OLQI01000102
[OLQI] human gut metagenome; faeces
88702
88786
+
Leu
CAG
[ENA]
¢þ
>WENV183217447
OLQI01000342
[OLQI] human gut metagenome; faeces
5748
5663
-
Leu
CAG
[ENA]
¢þ
>WENV183238353
OLQY01029895
[OLQY] human gut metagenome; faeces
171
86
-
Leu
CAG
[ENA]
¢þ
>WENV183263156
OLRR01000010
[OLRR] human gut metagenome; faeces
75220
75135
-
Leu
CAG
[ENA]
¢þ
>WENV183307191
OLTD01002713
[OLTD] human gut metagenome; faeces
362
446
+
Leu
CAG
[ENA]
¢þ
>WENV183309647
OLVC01001766
[OLVC] human gut metagenome; faeces
225
140
-
Leu
CAG
[ENA]
¢þ
>WENV183309648
OLVC01001766
[OLVC] human gut metagenome; faeces
108
23
-
Leu
CAG
[ENA]
¢þ
>WENV183548924
OOAY01006497
[OOAY] human gut metagenome; human gut
1180
1265
+
Leu
CAG
[ENA]
¢þ
>WENV183560801
OOBU01000834
[OOBU] human gut metagenome; human gut
4079
4164
+
Leu
CAG
[ENA]
¢þ
>WENV183560802
OOBU01000834
[OOBU] human gut metagenome; human gut
4196
4281
+
Leu
CAG
[ENA]
¢þ
>WENV183560803
OOBU01000834
[OOBU] human gut metagenome; human gut
4313
4398
+
Leu
CAG
[ENA]
¢þ
>WENV183605831
OODN01000051
[OODN] human gut metagenome; human gut
29073
28988
-
Leu
CAG
[ENA]
¢þ
>WENV183605832
OODN01000051
[OODN] human gut metagenome; human gut
28956
28871
-
Leu
CAG
[ENA]
¢þ
>WENV183605833
OODN01000051
[OODN] human gut metagenome; human gut
28839
28754
-
Leu
CAG
[ENA]
¢þ
>WENV183605834
OODN01000051
[OODN] human gut metagenome; human gut
28722
28637
-
Leu
CAG
[ENA]
¢þ
>WENV183781374
PPYF01196118
[PPYF] human gut metagenome; stool from patient with Crohn's disease
14257
14342
+
Leu
CAG
[ENA]
¢þ
>C181004016
AP017973
Bacillota
Limosilactobacillus fermentum MTCC 25067 [AP017973]
430629
430714
+
Leu
CAG
-
¡û
>C181054747
CP021964
Bacillota
Limosilactobacillus fermentum CBA7106 [CP021964]
423498
423582
+
Leu
CAG
-
¡û
>C181196720
CP031195
Bacillota
Limosilactobacillus fermentum LDTM 7301 [CP031195]
1971140
1971224
+
Leu
CAG
-
¡û
>C181226920
LT906621
Bacillota
Limosilactobacillus fermentum IMDO 130101 [LT906621]
440279
440363
+
Leu
CAG
-
¡û
>C191012478
CP016803
Bacillota
Limosilactobacillus fermentum SK152 [CP016803]
789102
789018
-
Leu
CAG
-
¡û
>C191105229
CP033371
Bacillota
Limosilactobacillus fermentum DR9 [CP033371]
548899
548814
-
Leu
CAG
-
¡û
>C191119251
CP034099
Bacillota
Limosilactobacillus fermentum LMT2-75 [CP034099]
330353
330268
-
Leu
CAG
-
¡û
>C191121346
CP034193
Bacillota
Limosilactobacillus fermentum YL-11 [CP034193]
399124
399208
+
Leu
CAG
-
¡û
>C191134217
CP035054
Bacillota
Limosilactobacillus fermentum SRCM103285 [CP035054]
1731866
1731782
-
Leu
CAG
-
¡û
>C191134274
CP035055
Bacillota
Limosilactobacillus fermentum SRCM 103290 [CP035055]
999944
999860
-
Leu
CAG
-
¡û
>W09122629
ACGI01000058
Bacillota
Limosilactobacillus fermentum ATCC 14931 [ACGI]
57897
57983
+
Leu
CAG
[ENA]
¡û
>W141805371
JPKN01000281
Bacillota
Lacticaseibacillus paracasei casei [JPKN]
417
331
-
Leu
CAG
[ENA]
¡û
>W1910181259
BJLV01000002
Bacillota
Limosilactobacillus fermentum NBRC 3959 [BJLV]
36235
36151
-
Leu
CAG
[ENA]
¡û
>W1910374046
FUHY01000028
Bacillota
Limosilactobacillus fermentum S13 [FUHY]
17928
18012
+
Leu
CAG
[ENA]
¡û
>W1910374107
FUHZ01000065
Bacillota
Limosilactobacillus fermentum S6 [FUHZ]
18075
18159
+
Leu
CAG
[ENA]
¡û
>W1910954317
NJPQ01000025
Bacillota
Limosilactobacillus fermentum SHI-2 [NJPQ]
4357
4273
-
Leu
CAG
[ENA]
¡û
>W1911502670
OEPY01000001
Bacillota
[Lactobacillus] timonensis Marseille-P3825 [OEPY]
153675
153590
-
Leu
CAG
[ENA]
¡û
>W1911533701
OKQY01000040
Bacillota
Limosilactobacillus fermentum CECT 9269 [OKQY]
1015
931
-
Leu
CAG
[ENA]
¡û
>W1911594753
PNFV01000001
Bacillota
Limosilactobacillus pontis UMB0683 [PNFV]
312659
312574
-
Leu
CAG
[ENA]
¡û
>W1810059010
PDKX01000108
Bacillota
Limosilactobacillus fermentum NCDC 400 [PDKX]
493
408
-
Leu
CAG
[ENA]
¡û
>W1810090566
PGGE01000001
Bacillota
Limosilactobacillus fermentum 103 [PGGE]
3590
3506
-
Leu
CAG
[ENA]
¡û
>W1810090654
PGGI01000029
Bacillota
Limosilactobacillus fermentum 279 [PGGI]
20792
20876
+
Leu
CAG
[ENA]
¡û
>W1810090671
PGGJ01000004
Bacillota
Limosilactobacillus fermentum 311 [PGGJ]
960
876
-
Leu
CAG
[ENA]
¡û
>W1810190841
PKKD01000047
Bacillota
Limosilactobacillus fermentum UMB0187 [PKKD]
906
822
-
Leu
CAG
[ENA]
¡û
>W1810196534
PNBB01000013
Bacillota
Limosilactobacillus fermentum LfU21 [PNBB]
20470
20554
+
Leu
CAG
[ENA]
¡û
>W1810223782
POTQ01000024
Bacillota
Limosilactobacillus fermentum CRL1446 [POTQ]
1827
1743
-
Leu
CAG
[ENA]
¡û
>W1810297040
PTLW01000001
Bacillota
Limosilactobacillus fermentum MD IIE-4657 [PTLW]
4325
4241
-
Leu
CAG
[ENA]
¡û
>W1810473343
QAHK01000025
Bacillota
Limosilactobacillus fermentum DS13_7 [QAHK]
3639
3555
-
Leu
CAG
[ENA]
¡û
>W1810489181
QAZV01000062
Bacillota
Limosilactobacillus fermentum DS19_7 [QAZV]
3640
3556
-
Leu
CAG
[ENA]
¡û
>W1810595137
QGDR01000001
Bacillota
Limosilactobacillus mucosae AGR63 [QGDR]
264735
264820
+
Leu
CAG
[ENA]
¡û
>W1810595138
QGDR01000001
Bacillota
Limosilactobacillus mucosae AGR63 [QGDR]
264853
264938
+
Leu
CAG
[ENA]
¡û
>W1810595139
QGDR01000001
Bacillota
Limosilactobacillus mucosae AGR63 [QGDR]
264971
265056
+
Leu
CAG
[ENA]
¡û
>W1810595140
QGDR01000001
Bacillota
Limosilactobacillus mucosae AGR63 [QGDR]
265088
265173
+
Leu
CAG
[ENA]
¡û
>W1810695485
QLNN01000024
Bacillota
Limosilactobacillus fermentum LF2 [QLNN]
17675
17759
+
Leu
CAG
[ENA]
¡û
>W1810705623
QMJL01000044
Bacillota
Limosilactobacillus fermentum KMB_612 [QMJL]
238
154
-
Leu
CAG
[ENA]
¡û
>W1810705655
QMJM01000029
Bacillota
Limosilactobacillus fermentum KMB_613 [QMJM]
535
451
-
Leu
CAG
[ENA]
¡û
>W1810811219
QRYA01000039
Bacillota
Limosilactobacillus fermentum AF16-22LB [QRYA]
2377
2293
-
Leu
CAG
[ENA]
¡û
>W1810811823
QRYM01000001
Bacillota
Limosilactobacillus fermentum AF15-40LB [QRYM]
139083
139167
+
Leu
CAG
[ENA]
¡û
>W1810814672
QSAL01000018
Bacillota
Limosilactobacillus fermentum AF11-4-H [QSAL]
40256
40171
-
Leu
CAG
[ENA]
¡û
>C151003039
AP014680
Bacillota
Paucilactobacillus hokkaidonensis JCM 18461 LOOC260 [AP014680]
1297688
1297773
+
Leu
CAG
[Ensembl]
¡û
>C151075343
CP011013
Bacillota
Limosilactobacillus mucosae LM1 [CP011013]
531973
531888
-
Leu
CAG
[Ensembl]
¡û
>C151075344
CP011013
Bacillota
Limosilactobacillus mucosae LM1 [CP011013]
531856
531771
-
Leu
CAG
[Ensembl]
¡û
>C151075345
CP011013
Bacillota
Limosilactobacillus mucosae LM1 [CP011013]
531738
531653
-
Leu
CAG
[Ensembl]
¡û
>C151075346
CP011013
Bacillota
Limosilactobacillus mucosae LM1 [CP011013]
531621
531536
-
Leu
CAG
[Ensembl]
¡û
>C151084240
CP011536
Bacillota
Limosilactobacillus fermentum 3872 [CP011536]
447168
447254
+
Leu
CAG
-
¡û
>W10103386
ACQG01000056
Bacillota
Limosilactobacillus fermentum 28-3-CHN [ACQG]
3486
3400
-
Leu
CAG
[ENA]
¡û
>W1510021780
BCAH01000020
Bacillota
Limosilactobacillus gorillae KZ01 [BCAH]
25019
24935
-
Leu
CAG
[ENA]
¡û
>W1510022560
CBZV010000024
Bacillota
Limosilactobacillus fermentum 222 [CBZV]
24099
24185
+
Leu
CAG
[ENA]
¡û
>C10108343
CP002033
Bacillota
Limosilactobacillus fermentum CECT 5716 [CP002033]
434642
434728
+
Leu
CAG
[Ensembl]
¡û
>W11103542
ACQG01000056
Bacillota
Limosilactobacillus fermentum 28-3-CHN [ACQG]
3486
3400
-
Leu
CAG
[ENA]
¡û
>W1510650187
CVQW01000010
Bacillota
Limosilactobacillus mucosae LM1 Marseille [CVQW]
136770
136685
-
Leu
CAG
[ENA]
¡û
>W1510650188
CVQW01000010
Bacillota
Limosilactobacillus mucosae LM1 Marseille [CVQW]
136653
136568
-
Leu
CAG
[ENA]
¡û
>W1510650189
CVQW01000010
Bacillota
Limosilactobacillus mucosae LM1 Marseille [CVQW]
136535
136450
-
Leu
CAG
[ENA]
¡û
>W1510650190
CVQW01000010
Bacillota
Limosilactobacillus mucosae LM1 Marseille [CVQW]
136418
136333
-
Leu
CAG
[ENA]
¡û
>W1511352342
JROC01000022
Bacillota
Limosilactobacillus mucosae CRL573 [JROC]
18208
18293
+
Leu
CAG
[ENA]
¡û
>W1511352343
JROC01000022
Bacillota
Limosilactobacillus mucosae CRL573 [JROC]
18325
18410
+
Leu
CAG
[ENA]
¡û
>W1511388665
JSWI01000002
Bacillota
Limosilactobacillus mucosae DPC 6426 [JSWI]
5921
6006
+
Leu
CAG
[ENA]
¡û
>W1511388666
JSWI01000002
Bacillota
Limosilactobacillus mucosae DPC 6426 [JSWI]
6039
6124
+
Leu
CAG
[ENA]
¡û
>W1511388667
JSWI01000002
Bacillota
Limosilactobacillus mucosae DPC 6426 [JSWI]
6156
6241
+
Leu
CAG
[ENA]
¡û
>W1511443799
JUTH01000140
Bacillota
Limosilactobacillus fermentum 779_LFER [JUTH]
8344
8430
+
Leu
CAG
[ENA]
¡û
>W11139781
AEKL01000079
Bacillota
Limosilactobacillus oris PB013-T2-3 [AEKL]
12298
12383
+
Leu
CAG
[ENA]
¡û
>W1511567828
LAIK01000005
Bacillota
Limosilactobacillus fermentum LfQi6 [LAIK]
109270
109186
-
Leu
CAG
[ENA]
¡û
>W1511589479
LBDG01000004
Bacillota
Limosilactobacillus fermentum 39 [LBDG]
73464
73378
-
Leu
CAG
[ENA]
¡û
>W1511589504
LBDH01000002
Bacillota
Limosilactobacillus fermentum 90 TC-4 [LBDH]
99740
99825
+
Leu
CAG
[ENA]
¡û
>W11172996
AFTL01000004
Bacillota
Limosilactobacillus oris F0423 [AFTL]
52512
52427
-
Leu
CAG
[ENA]
¡û
>C161077721
CP014787
Bacillota
Limosilactobacillus oris J-1 [CP014787]
1479984
1479898
-
Leu
CAG
-
¡û
>W121033334
AHIT01000023
Bacillota
Limosilactobacillus mucosae LM1 [AHIT]
120573
120658
+
Leu
CAG
[ENA]
¡û
>W121033335
AHIT01000023
Bacillota
Limosilactobacillus mucosae LM1 [AHIT]
120690
120775
+
Leu
CAG
[ENA]
¡û
>W1610034036
AZDK01000008
Bacillota
Limosilactobacillus antri DSM 16041 [AZDK]
37080
37165
+
Leu
CAG
[ENA]
¡û
>W1610035669
AZER01000016
Bacillota
Limosilactobacillus frumenti DSM 13145 [AZER]
492822
492906
+
Leu
CAG
[ENA]
¡û
>W1610036570
AZFK01000002
Bacillota
Limosilactobacillus ingluviei DSM 15946 [AZFK]
13952
14037
+
Leu
CAG
[ENA]
¡û
>W1610036572
AZFK01000002
Bacillota
Limosilactobacillus ingluviei DSM 15946 [AZFK]
14239
14324
+
Leu
CAG
[ENA]
¡û
>W1610036757
AZFN01000001
Bacillota
Limosilactobacillus gastricus DSM 16045 [AZFN]
117333
117418
+
Leu
CAG
[ENA]
¡û
>W1610037634
AZGE01000003
Bacillota
Limosilactobacillus oris DSM 4864 [AZGE]
36131
36216
+
Leu
CAG
[ENA]
¡û
>W1610037979
AZGL01000016
Bacillota
Limosilactobacillus vaginalis DSM 5837 = ATCC 49540 [AZGL]
31064
31148
+
Leu
CAG
[ENA]
¡û
>W1610038031
AZGM01000125
Bacillota
Limosilactobacillus panis DSM 6035 [AZGM]
11098
11185
+
Leu
CAG
[ENA]
¡û
>W1610044965
BBAY01000018
Bacillota
Paucilactobacillus hokkaidonensis JCM 18461 [BBAY]
39290
39205
-
Leu
CAG
[ENA]
¡û
>W1610083174
CBUR010000032
Bacillota
Limosilactobacillus fermentum L930BB [CBUR]
412
326
-
Leu
CAG
[ENA]
¡û
>C131016163
CP005958
Bacillota
Limosilactobacillus fermentum F-6 [CP005958]
424655
424740
+
Leu
CAG
[Ensembl]
¡û
>W1610527914
JQAU01000001
Bacillota
Limosilactobacillus fermentum [JQAU]
3984
3898
-
Leu
CAG
[ENA]
¡û
>W1610529165
JQBW01000004
Bacillota
Limosilactobacillus secaliphilus [JQBW]
165162
165247
+
Leu
CAG
[ENA]
¡û
>W1610529181
JQBW01000006
Bacillota
Limosilactobacillus secaliphilus [JQBW]
234011
233924
-
Leu
CAG
[ENA]
¡û
>W1610529728
JQCH01000021
Bacillota
Paucilactobacillus hokkaidonensis [JQCH]
1008
1093
+
Leu
CAG
[ENA]
¡û
>W1610647410
LJFJ01000006
Bacillota
Limosilactobacillus fermentum [LJFJ]
214100
214186
+
Leu
CAG
[ENA]
¡û
>W1610665538
LJWZ01000028
Bacillota
Limosilactobacillus fermentum [LJWZ]
20599
20685
+
Leu
CAG
[ENA]
¡û
>W1710031163
AZDK01000008
Bacillota
Limosilactobacillus antri DSM 16041 [AZDK]
37080
37165
+
Leu
CAG
[ENA]
¡û
>W1710032708
AZER01000016
Bacillota
Limosilactobacillus frumenti DSM 13145 [AZER]
492822
492906
+
Leu
CAG
[ENA]
¡û
>W1710033609
AZFK01000002
Bacillota
Limosilactobacillus ingluviei DSM 15946 [AZFK]
13952
14037
+
Leu
CAG
[ENA]
¡û
>W1710033611
AZFK01000002
Bacillota
Limosilactobacillus ingluviei DSM 15946 [AZFK]
14239
14324
+
Leu
CAG
[ENA]
¡û
>W1710033796
AZFN01000001
Bacillota
Limosilactobacillus gastricus DSM 16045 [AZFN]
117333
117418
+
Leu
CAG
[ENA]
¡û
>W1710034673
AZGE01000003
Bacillota
Limosilactobacillus oris DSM 4864 [AZGE]
36131
36216
+
Leu
CAG
[ENA]
¡û
>W1710035023
AZGM01000125
Bacillota
Limosilactobacillus panis DSM 6035 [AZGM]
11098
11185
+
Leu
CAG
[ENA]
¡û
>W1710042063
BBAY01000018
Bacillota
Paucilactobacillus hokkaidonensis JCM 18461 [BBAY]
39290
39205
-
Leu
CAG
[ENA]
¡û
>W1710088294
CBUR010000032
Bacillota
Limosilactobacillus fermentum L930BB [CBUR]
412
326
-
Leu
CAG
[ENA]
¡û
>W1710523890
FNIH01000019
Bacillota
Limosilactobacillus mucosae [FNIH]
17740
17655
-
Leu
CAG
[ENA]
¡û
>W1710523895
FNIH01000024
Bacillota
Limosilactobacillus mucosae [FNIH]
94
9
-
Leu
CAG
[ENA]
¡û
>W1710543426
FNZY01000016
Bacillota
Limosilactobacillus mucosae [FNZY]
17982
17897
-
Leu
CAG
[ENA]
¡û
>W1710543427
FNZY01000016
Bacillota
Limosilactobacillus mucosae [FNZY]
17740
17655
-
Leu
CAG
[ENA]
¡û
>W1710566956
FOSI01000019
Bacillota
Limosilactobacillus mucosae [FOSI]
4
89
+
Leu
CAG
[ENA]
¡û
>W1710566961
FOSI01000024
Bacillota
Limosilactobacillus mucosae [FOSI]
94
9
-
Leu
CAG
[ENA]
¡û
>W1710629545
JQAU01000001
Bacillota
Limosilactobacillus fermentum [JQAU]
3984
3898
-
Leu
CAG
[ENA]
¡û
>W1710630755
JQBW01000004
Bacillota
Limosilactobacillus secaliphilus [JQBW]
165162
165247
+
Leu
CAG
[ENA]
¡û
>W1710630771
JQBW01000006
Bacillota
Limosilactobacillus secaliphilus [JQBW]
234011
233924
-
Leu
CAG
[ENA]
¡û
>W1710631318
JQCH01000021
Bacillota
Paucilactobacillus hokkaidonensis [JQCH]
1008
1093
+
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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