tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.60320 (54 seq.)
>W1710882953 LMVF01000053 Betaproteobacteria Cupriavidus necator [LMVF] 11830 11916 + Leu TAA [ENA] ¡û
>W1711167634 LVWN01000053 Betaproteobacteria Cupriavidus necator [LVWN] 11830 11916 + Leu TAA [ENA] ¡û
>W1711168310 LVXY01000005 Betaproteobacteria Cupriavidus gilardii [LVXY] 290916 290830 - Leu TAA [ENA] ¡û
>W131156663 AQPZ01000059 Betaproteobacteria Cupriavidus sp. GA3-3 GA3-3 [AQPZ] 98104 98018 - Leu TAA [ENA] ¡û
>W131227472 AUFE01000010 Betaproteobacteria Cupriavidus sp. amp6 [AUFE] 75486 75400 - Leu TAA [ENA] ¡û
>C171066979 CP017748 Betaproteobacteria Cupriavidus sp. USMAA2-4 [CP017748, CP017749] 3924268 3924182 - Leu TAA - ¡û
>C171067016 CP017751 Betaproteobacteria Cupriavidus sp. USMAHM13 [CP017751, CP017752] 3301855 3301941 + Leu TAA - ¡û
>C171067089 CP017754 Betaproteobacteria Cupriavidus malaysiensis USMAA1020 [CP017754, CP017755] 3425423 3425509 + Leu TAA - ¡û
>C171067160 CP017757 Betaproteobacteria Cupriavidus necator NH9 [CP017757, CP017758] 2970637 2970723 + Leu TAA - ¡û
>W131156209 AQPL01000102 Betaproteobacteria Cupriavidus sp. WS [AQPL] 182 96 - Leu TAA [ENA] ¡û
>C018451 AM260479 Betaproteobacteria Cupriavidus necator H16 [AM260479, AM260480] 2749388 2749474 + Leu TAA [Ensembl] ¡û
>C018507 CP000090 Betaproteobacteria Cupriavidus pinatubonensis [CP000090] 2472896 2472982 + Leu TAA [Ensembl] ¡û
>WENV180026506 FTIU01000487 [FTIU] metagenome; soil 2773 2687 - Leu TAA [ENA] ¢þ
>WENV180026902 FTIV01000778 [FTIV] metagenome; soil 741 827 + Leu TAA [ENA] ¢þ
>WENV180030316 FTJL01688462 [FTJL] metagenome; soil 2254 2340 + Leu TAA [ENA] ¢þ
>C08008194 AM260479 Betaproteobacteria Cupriavidus necator H16 [AM260479, AM260480] 2749388 2749474 + Leu TAA [Ensembl] ¡û
>W141463949 JFJW01000055 Betaproteobacteria Cupriavidus sp. SK-4 [JFJW] 107505 107591 + Leu TAA [ENA] ¡û
>WENV170965481 MTEU01003088 [MTEU] soil metagenome; naturally attenuated soil 3619 3705 + Leu TAA [ENA] ¢þ
>C191117108 CP033969 Betaproteobacteria Cupriavidus pauculus FDAARGOS_614 [CP033969, CP033970] 2081104 2081018 - Leu TAA - ¡û
>C191161473 CP038635 Betaproteobacteria Cupriavidus oxalaticus X32 [CP038634, CP038635] 2418944 2419030 + Leu TAA - ¡û
>C191164565 CP039287 Betaproteobacteria Cupriavidus necator H16 [CP039287, CP039288] 2748646 2748732 + Leu TAA - ¡û
>W09101059 AADY01000002 Betaproteobacteria Cupriavidus pinatubonensis JMP134 [AADY] 132842 132928 + Leu TAA [ENA] ¡û
>W141818197 JQLI01000008 Betaproteobacteria Cupriavidus necator A5-1 [JQLI] 3451448 3451534 + Leu TAA [ENA] ¡û
>W1910225292 FMSH01000038 Betaproteobacteria Cupriavidus necator B9 [FMSH] 21019 20933 - Leu TAA [ENA] ¡û
>C141006464 CP006667 Betaproteobacteria Ralstonia pickettii DTP0602 [CP006667, CP006668, CP006669] 3106384 3106470 + Leu TAA [Ensembl] ¡û
>W1910636894 LPWJ01000249 Betaproteobacteria Cupriavidus sp. UYMSc13B [LPWJ] 4066 4152 + Leu TAA [ENA] ¡û
>W1911532224 OGUS01000118 Betaproteobacteria Cupriavidus oxalaticus [OGUS] 72930 73016 + Leu TAA [ENA] ¡û
>W1810017351 BGPQ01000025 Betaproteobacteria Cupriavidus sp. P-10 [BGPQ] 15132 15218 + Leu TAA [ENA] ¡û
>W1810177541 PJRP01000009 Betaproteobacteria Cupriavidus pauculus UM1 [PJRP] 187451 187537 + Leu TAA [ENA] ¡û
>W1810539961 QDHA01000034 Betaproteobacteria Cupriavidus necator CR12 [QDHA] 96997 96911 - Leu TAA [ENA] ¡û
>W1810596768 QGGT01000001 Betaproteobacteria Cupriavidus plantarum SLV-132 [QGGT] 688257 688171 - Leu TAA [ENA] ¡û
>W1810683941 QKWJ01000025 Betaproteobacteria Cupriavidus lacunae S23 [QKWJ] 231 145 - Leu TAA [ENA] ¡û
>W1810861199 QTTS01000001 Betaproteobacteria Cupriavidus plantarum MA1-2za [QTTS] 1415940 1416026 + Leu TAA [ENA] ¡û
>C151070001 CP010516 Betaproteobacteria Cupriavidus gilardii CR3 [CP010516, CP010517] 2237198 2237284 + Leu TAA - ¡û
>C151070637 CP010536 Betaproteobacteria Cupriavidus basilensis 4G11 [CP010536, CP010537] 3006728 3006814 + Leu TAA [Ensembl] ¡û
>ENV09000469 ABSO01001916 Freshwater sediment metagenome lwFormate_C1 1559 1473 - Leu TAA [ENA] ¡û
>ENV09000563 ABSO01021483 Freshwater sediment metagenome lwFormate_C1 427 513 + Leu TAA [ENA] ¡û
>W1510015093 BBQN01000060 Betaproteobacteria Cupriavidus pauculus KF709 [BBQN] 31614 31528 - Leu TAA [ENA] ¡û
>C11105753 CP002877 Betaproteobacteria Cupriavidus necator N-1 [CP002877, CP002878] 2508799 2508885 + Leu TAA [Ensembl] ¡û
>W1511483760 JWMA01000002 Betaproteobacteria Cupriavidus sp. IDO [JWMA] 53203 53117 - Leu TAA [ENA] ¡û
>W1511534643 JYOD01000005 Betaproteobacteria Burkholderiaceae bacterium 16 [JYOD] 39006 39092 + Leu TAA [ENA] ¡û
>W121102758 AKXR01001047 Betaproteobacteria Cupriavidus basilensis B-8 [AKXR] 6697 6611 - Leu TAA [ENA] ¡û
>W1610053695 BBQI01000004 Betaproteobacteria Cupriavidus sp. D384 [BBQI] 27160 27246 + Leu TAA [ENA] ¡û
>W1610074304 BCWO01000014 Betaproteobacteria Cupriavidus oxalaticus NBRC 13593 [BCWO] 8168 8254 + Leu TAA [ENA] ¡û
>W1610077538 BCZN01000056 Betaproteobacteria Cupriavidus necator NBRC 102504 [BCZN] 12449 12535 + Leu TAA [ENA] ¡û
>W1610744879 LMVF01000053 Betaproteobacteria Cupriavidus necator [LMVF] 11830 11916 + Leu TAA [ENA] ¡û
>W1610978225 LVXY01000005 Betaproteobacteria Cupriavidus gilardii [LVXY] 290916 290830 - Leu TAA [ENA] ¡û
>W1710050073 BBQI01000004 Betaproteobacteria Cupriavidus sp. D384 [BBQI] 27160 27246 + Leu TAA [ENA] ¡û
>W1710071422 BCWO01000014 Betaproteobacteria Cupriavidus oxalaticus NBRC 13593 [BCWO] 8168 8254 + Leu TAA [ENA] ¡û
>W1710075176 BCZN01000056 Betaproteobacteria Cupriavidus necator NBRC 102504 [BCZN] 12449 12535 + Leu TAA [ENA] ¡û
>W1710511875 FMYZ01000001 Betaproteobacteria Cupriavidus sp. YR651 [FMYZ] 672831 672917 + Leu TAA [ENA] ¡û
>W1710525442 FNJO01000001 Betaproteobacteria Ralstonia sp. 25mfcol4.1 [FNJO] 354205 354291 + Leu TAA [ENA] ¡û
>W1710557305 FOKX01000001 Betaproteobacteria Cupriavidus sp. OV038 [FOKX] 417759 417845 + Leu TAA [ENA] ¡û
>W1710572161 FOWM01000001 Betaproteobacteria Cupriavidus sp. OV096 [FOWM] 417759 417845 + Leu TAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK