This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.63400 (6 seq.)
>WENV170984720
MWVV01405553
[MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil
232
146
-
Leu
CAA
[ENA]
¢þ
>WENV170986229
MWVX01022877
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
114
200
+
Leu
CAA
[ENA]
¢þ
>WENV170986792
MWVX01079801
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
133
219
+
Leu
CAA
[ENA]
¢þ
>WENV170992637
MWWB01059676
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
707
793
+
Leu
CAA
[ENA]
¢þ
>WENV170992967
MWWB01143097
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
479
565
+
Leu
CAA
[ENA]
¢þ
>WENV170994975
MWWE01104791
[MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil
157
71
-
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK