tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.65244 (96 seq.)
>W1710785117 LJHO01000032 Alphaproteobacteria Novosphingobium sp. AAP1 [LJHO] 7174 7260 + Leu CAG [ENA] ¡û
>W1710926903 LOET01000113 Alphaproteobacteria Sphingomonadales bacterium BRH_c3 [LOET] 3446 3360 - Leu CAG [ENA] ¡û
>W131104481 APCQ01000675 Alphaproteobacteria Novosphingobium sp. B-7 [APCQ] 5645 5559 - Leu CAG [ENA] ¡û
>W1711073699 LSIV01000095 Alphaproteobacteria Caulobacter sp. CCH4-E1 [LSIV] 37967 38053 + Leu CAG [ENA] ¡û
>W1711074258 LSJJ01000055 Alphaproteobacteria Erythrobacter donghaensis [LSJJ] 5779 5693 - Leu CAG [ENA] ¡û
>W1711074555 LSJQ01000342 Alphaproteobacteria Erythrobacter donghaensis [LSJQ] 6819 6905 + Leu CAG [ENA] ¡û
>W1711074660 LSJS01000273 Alphaproteobacteria Erythrobacter donghaensis [LSJS] 5779 5693 - Leu CAG [ENA] ¡û
>W1711174531 LWEG01000070 Alphaproteobacteria Erythrobacter sp. HI00D59 [LWEG] 175580 175666 + Leu CAG [ENA] ¡û
>W1711175125 LWEN01000401 Alphaproteobacteria Erythrobacter sp. HI0019 [LWEN] 3168 3082 - Leu CAG [ENA] ¡û
>W1711176210 LWFF01000340 Alphaproteobacteria Erythrobacter sp. HI0063 [LWFF] 6803 6717 - Leu CAG [ENA] ¡û
>W1711176769 LWFO01000568 Alphaproteobacteria Erythrobacter sp. HI0074 [LWFO] 385 471 + Leu CAG [ENA] ¡û
>W1711176929 LWFR01000102 Alphaproteobacteria Erythrobacter sp. HI0077 [LWFR] 9079 9165 + Leu CAG [ENA] ¡û
>W1711387044 MEGD01000013 Alphaproteobacteria Novosphingobium sp. SCN 66-18 [MEGD] 2656 2570 - Leu CAG [ENA] ¡û
>W1711766477 MUYK01000005 Alphaproteobacteria Erythrobacter colymbi [MUYK] 123256 123342 + Leu CAG [ENA] ¡û
>C171057317 CP017113 Alphaproteobacteria Porphyrobacter sp. LM 6 [CP017113] 96704 96790 + Leu CAG - ¡û
>C171096141 CP019602 Alphaproteobacteria Croceicoccus marinus E4A9 [CP019602] 267928 268014 + Leu CAG - ¡û
>WENV180071450 MPLZ02237510 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 176 262 + Leu CAG [ENA] ¢þ
>WENV180363804 OBNZ01008222 [OBNZ] marine metagenome; ENVO:00002010 320 234 - Leu CAG [ENA] ¢þ
>WENV180595621 OCPE01020849 [OCPE] marine metagenome; ENVO.00002150 299 213 - Leu CAG [ENA] ¢þ
>WENV180689301 OCZA010730577 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 135 221 + Leu CAG [ENA] ¢þ
>WENV181234558 OFEU01000383 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 10823 10737 - Leu CAG [ENA] ¢þ
>WENV182546389 OJBO01018433 [OJBO] seawater metagenome; Sea water 126 40 - Leu CAG [ENA] ¢þ
>WENV182549251 OJBY01000056 [OJBY] seawater metagenome; Sea water 49979 49893 - Leu CAG [ENA] ¢þ
>W141273307 CCSI01000002 Alphaproteobacteria Qipengyuania vulgaris [CCSI] 514195 514281 + Leu CAG [ENA] ¡û
>WENV183729130 PJTQ01005949 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 1555 1469 - Leu CAG [ENA] ¢þ
>WENV183732922 PJTY01000001 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 673663 673577 - Leu CAG [ENA] ¢þ
>WENV170002690 AGTN01101739 [AGTN] bioreactor metagenome; poplar biomass 114 200 + Leu CAG [ENA] ¢þ
>WENV170004109 AGTN01563236 [AGTN] bioreactor metagenome; poplar biomass 337 423 + Leu CAG [ENA] ¢þ
>WENV170176372 CEOS01069884 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1128 1214 + Leu CAG [ENA] ¢þ
>WENV170203509 CEPS01059221 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 271 185 - Leu CAG [ENA] ¢þ
>WENV170221286 CEQA01051333 [CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 177 - Leu CAG [ENA] ¢þ
>WENV170237989 CEQM01105443 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 281 + Leu CAG [ENA] ¢þ
>WENV170242322 CEQO01047557 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 518 432 - Leu CAG [ENA] ¢þ
>WENV170247566 CEQQ01047137 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 262 176 - Leu CAG [ENA] ¢þ
>WENV170256958 CEQX01145770 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 437 351 - Leu CAG [ENA] ¢þ
>WENV170264464 CERD01035298 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6459 6373 - Leu CAG [ENA] ¢þ
>WENV170290115 CERY01104603 [CERY] marine metagenome genome assembly TARA_065_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1521 1607 + Leu CAG [ENA] ¢þ
>WENV170299482 CESG01037655 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 87 1 - Leu CAG [ENA] ¢þ
>WENV170333708 CESY01079383 [CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 443 529 + Leu CAG [ENA] ¢þ
>WENV170369918 CETR01046351 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 438 352 - Leu CAG [ENA] ¢þ
>WENV170377902 CETU01282008 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 657 743 + Leu CAG [ENA] ¢þ
>WENV170457235 CEVA01316307 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 477 563 + Leu CAG [ENA] ¢þ
>WENV170476086 CEVI01069662 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 246 160 - Leu CAG [ENA] ¢þ
>W141452305 JFBW01000002 Alphaproteobacteria Sphingomonas jaspsi DSM 18422 [JFBW] 836984 837070 + Leu CAG [ENA] ¡û
>WENV170735664 LULL01007438 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 530 444 - Leu CAG [ENA] ¢þ
>WENV170737437 LULO01000108 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 13735 13649 - Leu CAG [ENA] ¢þ
>WENV170761885 LUMW01000049 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 25045 24959 - Leu CAG [ENA] ¢þ
>WENV170765408 LWDU01037369 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 11072 11158 + Leu CAG [ENA] ¢þ
>WENV170831989 MDSZ01054055 [MDSZ] marine metagenome; seawater 5948 5862 - Leu CAG [ENA] ¢þ
>WENV170904542 MDTE01013343 [MDTE] marine metagenome; seawater 94 8 - Leu CAG [ENA] ¢þ
>WENV170906425 MDTE01038451 [MDTE] marine metagenome; seawater 6 92 + Leu CAG [ENA] ¢þ
>WENV170915005 MDTE01156895 [MDTE] marine metagenome; seawater 94 8 - Leu CAG [ENA] ¢þ
>WENV171003524 NNBU01000239 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 43988 44074 + Leu CAG [ENA] ¢þ
>C181067654 CP022528 Alphaproteobacteria Qipengyuania flava VG1 [CP022528] 509732 509818 + Leu CAG - ¡û
>C181069552 CP022600 Alphaproteobacteria Porphyrobacter sp. HT-58-2 [CP022600] 94484 94570 + Leu CAG - ¡û
>C181072793 CP022889 Alphaproteobacteria Tsuneonella mangrovi C9-11 [CP022889] 661034 661120 + Leu CAG - ¡û
>C181108534 CP024920 Alphaproteobacteria Qipengyuania seohaensis SW-135 [CP024920] 1200181 1200095 - Leu CAG - ¡û
>C191188850 CP041222 Alphaproteobacteria Porphyrobacter sp. YT40 [CP041222] 1076708 1076622 - Leu CAG - ¡û
>W141700114 JMIV01000005 Alphaproteobacteria Erythrobacter sp. JL475 [JMIV] 416209 416123 - Leu CAG [ENA] ¡û
>W141700144 JMIW01000004 Alphaproteobacteria Erythrobacter longus [JMIW] 148557 148471 - Leu CAG [ENA] ¡û
>W1910651526 LYMM01000065 Alphaproteobacteria Novosphingobium guangzhouense SA925 [LYMM] 19639 19725 + Leu CAG [ENA] ¡û
>W1911767962 QXFL01000003 Alphaproteobacteria Aurantiacibacter zhengii V18 [QXFL] 429938 430024 + Leu CAG [ENA] ¡û
>W1911768030 QXFM01000139 Alphaproteobacteria Aurantiacibacter xanthus CCTCC AB 2015396 [QXFM] 88852 88766 - Leu CAG [ENA] ¡û
>W1911783366 QXTF01000001 Alphaproteobacteria Sphingomonas edaphi DAC4 [QXTF] 840193 840107 - Leu CAG [ENA] ¡û
>W1810463755 PZZU01000030 Alphaproteobacteria Novosphingobium sp. GV064 [PZZU] 1625 1539 - Leu CAG [ENA] ¡û
>W1810477346 QAOS01000030 Alphaproteobacteria Novosphingobium sp. GV055 [QAOS] 1625 1539 - Leu CAG [ENA] ¡û
>W1810513900 QBUA01000030 Alphaproteobacteria Novosphingobium sp. GV061 [QBUA] 1625 1539 - Leu CAG [ENA] ¡û
>W1810514113 QBUE01000030 Alphaproteobacteria Novosphingobium sp. GV079 [QBUE] 1625 1539 - Leu CAG [ENA] ¡û
>W1810514322 QBUI01000030 Alphaproteobacteria Novosphingobium sp. GV027 [QBUI] 1625 1539 - Leu CAG [ENA] ¡û
>W1810677147 QKMM01000018 Alphaproteobacteria Novosphingobium sp. B3058 49 [QKMM] 2218 2132 - Leu CAG [ENA] ¡û
>C151048384 CP009291 Alphaproteobacteria Novosphingobium pentaromativorans US6-1 [CP009291] 1595849 1595763 - Leu CAG [Ensembl] ¡û
>C151079686 CP011310 Alphaproteobacteria Aurantiacibacter atlanticus s21-N3 [CP011310] 149082 148996 - Leu CAG [Ensembl] ¡û
>C151086223 CP011770 Alphaproteobacteria Croceicoccus naphthovorans PQ-2 [CP011770] 467684 467598 - Leu CAG [Ensembl] ¡û
>W1510019751 BBXA01000029 Alphaproteobacteria Novosphingobium sp. MD-1 [BBXA] 75304 75218 - Leu CAG [ENA] ¡û
>W1510024385 CCBH010000146 Alphaproteobacteria Novosphingobium sp. KN65.2 [CCBH] 45718 45804 + Leu CAG [ENA] ¡û
>C161098740 CP016545 Alphaproteobacteria Paraurantiacibacter namhicola JCM 16345 [CP016545] 161221 161135 - Leu CAG [Ensembl] ¡û
>W1610071255 BCTX01000085 Alphaproteobacteria Novosphingobium naphthalenivorans NBRC 102051 [BCTX] 17051 17137 + Leu CAG [ENA] ¡û
>W1610076586 BCYV01000043 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 7211 7297 + Leu CAG [ENA] ¡û
>W121009699 AGFM01000037 Alphaproteobacteria Novosphingobium pentaromativorans US6-1 [AGFM] 59814 59900 + Leu CAG [ENA] ¡û
>W1610648923 LJHO01000032 Alphaproteobacteria Novosphingobium sp. AAP1 [LJHO] 7174 7260 + Leu CAG [ENA] ¡û
>W1610784445 LOET01000113 Alphaproteobacteria Sphingomonadales bacterium BRH_c3 [LOET] 3446 3360 - Leu CAG [ENA] ¡û
>W1610913004 LSIV01000095 Alphaproteobacteria Caulobacter sp. CCH4-E1 [LSIV] 37967 38053 + Leu CAG [ENA] ¡û
>W1610913563 LSJJ01000055 Alphaproteobacteria Erythrobacter donghaensis [LSJJ] 5779 5693 - Leu CAG [ENA] ¡û
>W1610913860 LSJQ01000342 Alphaproteobacteria Erythrobacter donghaensis [LSJQ] 6819 6905 + Leu CAG [ENA] ¡û
>W1610913965 LSJS01000273 Alphaproteobacteria Erythrobacter donghaensis [LSJS] 5779 5693 - Leu CAG [ENA] ¡û
>W1610982844 LWEG01000070 Alphaproteobacteria Erythrobacter sp. HI00D59 [LWEG] 175580 175666 + Leu CAG [ENA] ¡û
>W1610983438 LWEN01000401 Alphaproteobacteria Erythrobacter sp. HI0019 [LWEN] 3168 3082 - Leu CAG [ENA] ¡û
>W1610984523 LWFF01000340 Alphaproteobacteria Erythrobacter sp. HI0063 [LWFF] 6803 6717 - Leu CAG [ENA] ¡û
>W1610985082 LWFO01000568 Alphaproteobacteria Erythrobacter sp. HI0074 [LWFO] 385 471 + Leu CAG [ENA] ¡û
>W1610985242 LWFR01000102 Alphaproteobacteria Erythrobacter sp. HI0077 [LWFR] 9079 9165 + Leu CAG [ENA] ¡û
>W1611004956 LXQM01000002 Alphaproteobacteria Croceibacterium salegens XY-R17 [LXQM] 94712 94626 - Leu CAG [ENA] ¡û
>W1710068620 BCTX01000085 Alphaproteobacteria Novosphingobium naphthalenivorans NBRC 102051 [BCTX] 17051 17137 + Leu CAG [ENA] ¡û
>W1710074275 BCYV01000043 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 7211 7297 + Leu CAG [ENA] ¡û
>W1710572850 FOWZ01000001 Alphaproteobacteria Qipengyuania nanhaisediminis [FOWZ] 206911 206825 - Leu CAG [ENA] ¡û
>W1710604578 FVZE01000002 Alphaproteobacteria Novosphingobium mathurense [FVZE] 658319 658405 + Leu CAG [ENA] ¡û
>W1710609204 FXWG01000002 Alphaproteobacteria Altererythrobacter xiamenensis [FXWG] 524285 524371 + Leu CAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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