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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.653581 (219 seq.)
>W1710797271
LJSX01000013
Alphaproteobacteria
Saliniramus fredricksonii HL-109 [LJSX]
80291
80365
+
Gly
GCC
[ENA]
¡û
>W1710893958
LNFG01000109
Alphaproteobacteria
Rhizobiales bacterium Ga0077555 [LNFG]
8494
8568
+
Gly
GCC
[ENA]
¡û
>W1710921734
LNZX01000024
Alphaproteobacteria
Bartonella henselae [LNZX]
24200
24126
-
Gly
GCC
[ENA]
¡û
>W1710921769
LNZY01000023
Alphaproteobacteria
Bartonella henselae [LNZY]
23966
23892
-
Gly
GCC
[ENA]
¡û
>W1710921820
LNZZ01000034
Alphaproteobacteria
Bartonella henselae [LNZZ]
5776
5850
+
Gly
GCC
[ENA]
¡û
>W1710921840
LOAA01000020
Alphaproteobacteria
Bartonella henselae [LOAA]
24203
24129
-
Gly
GCC
[ENA]
¡û
>W1710921883
LOAB01000022
Alphaproteobacteria
Bartonella henselae [LOAB]
5946
6020
+
Gly
GCC
[ENA]
¡û
>W1710921921
LOAC01000023
Alphaproteobacteria
Bartonella henselae [LOAC]
65977
66051
+
Gly
GCC
[ENA]
¡û
>W1710921943
LOAD01000003
Alphaproteobacteria
Bartonella henselae [LOAD]
5776
5850
+
Gly
GCC
[ENA]
¡û
>W1710921991
LOAE01000003
Alphaproteobacteria
Bartonella henselae [LOAE]
65574
65648
+
Gly
GCC
[ENA]
¡û
>W1710922022
LOAF01000006
Alphaproteobacteria
Bartonella henselae [LOAF]
24087
24013
-
Gly
GCC
[ENA]
¡û
>W1710922091
LOAG01000042
Alphaproteobacteria
Bartonella henselae [LOAG]
68655
68729
+
Gly
GCC
[ENA]
¡û
>W1710922093
LOAH01000004
Alphaproteobacteria
Bartonella henselae [LOAH]
66072
66146
+
Gly
GCC
[ENA]
¡û
>W1710922142
LOAI01000011
Alphaproteobacteria
Bartonella henselae [LOAI]
24247
24173
-
Gly
GCC
[ENA]
¡û
>W1710989803
LPWD01000429
Alphaproteobacteria
Methyloceanibacter marginalis [LPWD]
3591
3517
-
Gly
GCC
[ENA]
¡û
>W1710989817
LPWE01000010
Alphaproteobacteria
Methyloceanibacter stevinii [LPWE]
430444
430370
-
Gly
GCC
[ENA]
¡û
>W1710989878
LPWF01000026
Alphaproteobacteria
Methyloceanibacter superfactus [LPWF]
8330
8256
-
Gly
GCC
[ENA]
¡û
>W1710989897
LPWG01000002
Alphaproteobacteria
Methyloceanibacter methanicus [LPWG]
147292
147218
-
Gly
GCC
[ENA]
¡û
>W1711018287
LQWW01000001
Alphaproteobacteria
Bartonella bacilliformis [LQWW]
166654
166728
+
Gly
GCC
[ENA]
¡û
>W1711019429
LQXX01000001
Alphaproteobacteria
Bartonella bacilliformis [LQXX]
200710
200784
+
Gly
GCC
[ENA]
¡û
>W1711034285
LRIJ01000002
Alphaproteobacteria
Bartonella henselae str. Houston-1 [LRIJ]
1686346
1686420
+
Gly
GCC
[ENA]
¡û
>W1711229757
LXYS01000001
Alphaproteobacteria
Bartonella apis [LXYS]
622620
622694
+
Gly
GCC
[ENA]
¡û
>W1711229809
LXYT01000001
Alphaproteobacteria
Bartonella apis [LXYT]
959913
959839
-
Gly
GCC
[ENA]
¡û
>W1711229846
LXYU01000001
Alphaproteobacteria
Bartonella apis [LXYU]
523955
524029
+
Gly
GCC
[ENA]
¡û
>W1711385319
MEEB01000195
Alphaproteobacteria
Hyphomicrobium sp. SCN 65-11 [MEEB]
110
36
-
Gly
GCC
[ENA]
¡û
>W1711475571
MJUX01000005
Alphaproteobacteria
Acuticoccus yangtzensis [MJUX]
221920
221846
-
Gly
GCC
[ENA]
¡û
>W1711501309
MKRL01000295
Alphaproteobacteria
Alphaproteobacteria bacterium 64-6 [MKRL]
3232
3158
-
Gly
GCC
[ENA]
¡û
>W1711510443
MLAX01000005
Alphaproteobacteria
Alphaproteobacteria bacterium AO1-B [MLAX]
238399
238473
+
Gly
GCC
[ENA]
¡û
>W1711738578
MUBG01000001
Alphaproteobacteria
Bartonella sp. WD12.1 [MUBG]
1516186
1516260
+
Gly
GCC
[ENA]
¡û
>W1711766196
MUYE01000001
Alphaproteobacteria
Bartonella sp. AR 15-3 [MUYE]
1432027
1432101
+
Gly
GCC
[ENA]
¡û
>W1711766840
MUYW01000112
Alphaproteobacteria
Bartonella taylorii [MUYW]
178
252
+
Gly
GCC
[ENA]
¡û
>C171040318
CP015625
Alphaproteobacteria
Bartonella choladocola BBC0122 [CP015625]
2853963
2853889
-
Gly
GCC
-
¡û
>C171041704
CP015820
Alphaproteobacteria
Bartonella apihabitans BBC0178 [CP015820]
2547604
2547530
-
Gly
GCC
-
¡û
>C171060744
CP017315
Alphaproteobacteria
Candidatus Tokpelaia hoelldoblerii [CP017315]
1861966
1862040
+
Gly
GCC
-
¡û
>C171088727
CP019044
Alphaproteobacteria
Salaquimonas pukyongi RR3-28 [CP019044]
3201147
3201073
-
Gly
GCC
-
¡û
>C171099691
CP019780
Alphaproteobacteria
Bartonella sp. A1379B [CP019780]
1358647
1358721
+
Gly
GCC
-
¡û
>C171099734
CP019781
Alphaproteobacteria
Bartonella sp. WD16.2 [CP019781]
1582802
1582876
+
Gly
GCC
-
¡û
>C171099773
CP019786
Alphaproteobacteria
Bartonella sp. Raccoon60 [CP019786]
1432464
1432538
+
Gly
GCC
-
¡û
>C171099814
CP019787
Alphaproteobacteria
Bartonella sp. JB15 [CP019787]
1320195
1320269
+
Gly
GCC
-
¡û
>C171099854
CP019788
Alphaproteobacteria
Bartonella sp. JB63 [CP019788]
1319864
1319938
+
Gly
GCC
-
¡û
>W131044204
AMQK01000003
Alphaproteobacteria
Bartonella bacilliformis INS [AMQK]
18169
18095
-
Gly
GCC
[ENA]
¡û
>W131166458
ARCM01000002
Alphaproteobacteria
Ancylobacter sp. FA202 [ARCM]
923415
923341
-
Gly
GCC
[ENA]
¡û
>W131171137
ARFZ01000012
Alphaproteobacteria
Amorphus coralli DSM 19760 [ARFZ]
261072
261146
+
Gly
GCC
[ENA]
¡û
>W131175686
ARJL01000003
Alphaproteobacteria
Xanthobacteraceae bacterium 501b [ARJL]
4155387
4155461
+
Gly
GCC
[ENA]
¡û
>C002035
CP000524
Alphaproteobacteria
Bartonella bacilliformis KC583 KC583; ATCC 35685 [CP000524]
50872
50798
-
Gly
GCC
[Ensembl]
¡û
>C003024
BX897699
Alphaproteobacteria
Bartonella henselae str. Houston-1 [BX897699]
1880019
1880093
+
Gly
GCC
[Ensembl]
¡û
>C004003
BX897700
Alphaproteobacteria
Bartonella quintana str. Toulouse [BX897700]
1535763
1535837
+
Gly
GCC
[Ensembl]
¡û
>w015399
AAPC01000003
Alphaproteobacteria
Xanthobacter autotrophicus Py2 [AAPC]
152133
152207
+
Gly
GCC
[ENA]
¡û
>W141006743
AGWA01000019
Alphaproteobacteria
Bartonella bovis Apr-91 [AGWA]
283228
283302
+
Gly
GCC
[ENA]
¡û
>W141006783
AGWB01000036
Alphaproteobacteria
Bartonella bovis m02 [AGWB]
278074
278148
+
Gly
GCC
[ENA]
¡û
>W141006824
AGWC01000009
Alphaproteobacteria
Bartonella schoenbuchensis m07a [AGWC]
272923
272997
+
Gly
GCC
[ENA]
¡û
>W141006867
AGWD01000027
Alphaproteobacteria
Bartonella vinsonii subsp. berkhoffii str. Tweed [AGWD]
209708
209782
+
Gly
GCC
[ENA]
¡û
>WENV180094971
MTBK01041564
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
536
610
+
Gly
GCC
[ENA]
¢þ
>W141009621
AHPB01000018
Alphaproteobacteria
Bartonella quintana JK 39 [AHPB]
60609
60683
+
Gly
GCC
[ENA]
¡û
>W141009688
AHPC01000012
Alphaproteobacteria
Bartonella quintana JK 67 [AHPC]
61291
61365
+
Gly
GCC
[ENA]
¡û
>W141009732
AHPD01000011
Alphaproteobacteria
Bartonella quintana JK 68 [AHPD]
227315
227241
-
Gly
GCC
[ENA]
¡û
>W141009752
AHPE01000006
Alphaproteobacteria
Bartonella quintana JK 56 [AHPE]
227332
227258
-
Gly
GCC
[ENA]
¡û
>W141009792
AHPF01000008
Alphaproteobacteria
Bartonella quintana JK 63 [AHPF]
60627
60701
+
Gly
GCC
[ENA]
¡û
>W141009846
AHPG01000005
Alphaproteobacteria
Bartonella quintana JK 31 [AHPG]
227310
227236
-
Gly
GCC
[ENA]
¡û
>W141009899
AHPH01000011
Alphaproteobacteria
Bartonella quintana JK 19 [AHPH]
227329
227255
-
Gly
GCC
[ENA]
¡û
>W141009918
AHPI01000006
Alphaproteobacteria
Bartonella henselae JK 53 [AHPI]
249647
249573
-
Gly
GCC
[ENA]
¡û
>W141009960
AHPJ01000027
Alphaproteobacteria
Bartonella henselae str. Zeus [AHPJ]
65596
65670
+
Gly
GCC
[ENA]
¡û
>W141010024
AHPK01000013
Alphaproteobacteria
Bartonella rochalimae ATCC BAA-1498 [AHPK]
147020
146946
-
Gly
GCC
[ENA]
¡û
>W141010044
AHPL01000003
Alphaproteobacteria
Bartonella koehlerae C-29 [AHPL]
112899
112973
+
Gly
GCC
[ENA]
¡û
>W141038040
ALVF01000034
Alphaproteobacteria
Bartonella birtlesii E7 [ALVF]
17009
17083
+
Gly
GCC
[ENA]
¡û
>W141038084
ALVG01000033
Alphaproteobacteria
Bartonella birtlesii E11 [ALVG]
90996
90922
-
Gly
GCC
[ENA]
¡û
>W141038121
ALVH01000028
Alphaproteobacteria
Bartonella birtlesii E4 [ALVH]
91052
90978
-
Gly
GCC
[ENA]
¡û
>W141039341
ALWY01000214
Alphaproteobacteria
Bartonella birtlesii H12 [ALWY]
681
607
-
Gly
GCC
[ENA]
¡û
>WENV180591462
OCOV01024142
[OCOV] marine metagenome; ENVO:01000301
292
366
+
Gly
GCC
[ENA]
¢þ
>W141071149
ASIS01000001
Alphaproteobacteria
Bartonella bacilliformis Hosp800-02 [ASIS]
50860
50786
-
Gly
GCC
[ENA]
¡û
>W141071187
ASIT01000001
Alphaproteobacteria
Bartonella bacilliformis CUSCO5 [ASIT]
50878
50804
-
Gly
GCC
[ENA]
¡û
>W141071228
ASIU01000001
Alphaproteobacteria
Bartonella bacilliformis Cond044 [ASIU]
50852
50778
-
Gly
GCC
[ENA]
¡û
>W141071273
ASIV01000001
Alphaproteobacteria
Bartonella bacilliformis Ver097 [ASIV]
309678
309604
-
Gly
GCC
[ENA]
¡û
>W141071310
ASIW01000001
Alphaproteobacteria
Bartonella bacilliformis Peru38 [ASIW]
50856
50782
-
Gly
GCC
[ENA]
¡û
>W141071351
ASIX01000001
Alphaproteobacteria
Bartonella bacilliformis VAB9028 [ASIX]
50864
50790
-
Gly
GCC
[ENA]
¡û
>W141071392
ASIY01000001
Alphaproteobacteria
Bartonella bacilliformis Ver075 [ASIY]
50856
50782
-
Gly
GCC
[ENA]
¡û
>W141071433
ASIZ01000001
Alphaproteobacteria
Bartonella bacilliformis CAR600-02 [ASIZ]
50860
50786
-
Gly
GCC
[ENA]
¡û
>WENV181145423
OEHO01296586
[OEHO] metagenome; unknown
42
116
+
Gly
GCC
[ENA]
¢þ
>WENV181165562
OEIS01035560
[OEIS] soil metagenome; soil
87
161
+
Gly
GCC
[ENA]
¢þ
>WENV181168857
OEIU01851930
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
8
82
+
Gly
GCC
[ENA]
¢þ
>WENV181233919
OFET01000294
[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
37993
37919
-
Gly
GCC
[ENA]
¢þ
>WENV181234388
OFEU01000094
[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
38782
38708
-
Gly
GCC
[ENA]
¢þ
>WENV181307914
OFIS01000031
[OFIS] sludge metagenome; sludge
11521
11447
-
Gly
GCC
[ENA]
¢þ
>WENV181311347
OFJB01000964
[OFJB] sludge metagenome; sludge
11521
11447
-
Gly
GCC
[ENA]
¢þ
>WENV181402385
OFTY01001010
[OFTY] sludge metagenome; sludge
11520
11446
-
Gly
GCC
[ENA]
¢þ
>WENV181416391
OGCL01080438
[OGCL] hot springs metagenome; Hot spring water
87
161
+
Gly
GCC
[ENA]
¢þ
>W141200784
AYYG01000065
Alphaproteobacteria
Labrenzia sp. DG1229 [AYYG]
14683
14757
+
Gly
GCC
[ENA]
¡û
>C08011463
CP000781
Alphaproteobacteria
Xanthobacter autotrophicus Py2 [CP000781]
3866429
3866358
-
Gly
GCC
[Ensembl]
¡û
>W141222484
AZZR01000019
Alphaproteobacteria
Bartonella henselae JK 51 [AZZR]
112243
112317
+
Gly
GCC
[ENA]
¡û
>W141222525
AZZS01000025
Alphaproteobacteria
Bartonella henselae JK 50 [AZZS]
112243
112317
+
Gly
GCC
[ENA]
¡û
>W141222545
AZZT01000024
Alphaproteobacteria
Bartonella henselae JK 42 [AZZT]
109377
109451
+
Gly
GCC
[ENA]
¡û
>W141222581
AZZU01000018
Alphaproteobacteria
Bartonella henselae JK 41 [AZZU]
109377
109451
+
Gly
GCC
[ENA]
¡û
>W141222611
AZZV01000001
Alphaproteobacteria
Bartonella quintana BQ2-D70 [AZZV]
823040
822966
-
Gly
GCC
[ENA]
¡û
>W141222644
AZZW01000005
Alphaproteobacteria
Bartonella quintana JK 73rel [AZZW]
181295
181369
+
Gly
GCC
[ENA]
¡û
>W141222692
AZZX01000006
Alphaproteobacteria
Bartonella quintana JK 73 [AZZX]
71019
71093
+
Gly
GCC
[ENA]
¡û
>W141222763
AZZY01000009
Alphaproteobacteria
Bartonella quintana JK 12 [AZZY]
68704
68778
+
Gly
GCC
[ENA]
¡û
>W141222777
AZZZ01000006
Alphaproteobacteria
Bartonella quintana JK 7 [AZZZ]
68572
68646
+
Gly
GCC
[ENA]
¡û
>W141245861
CALU01000019
Alphaproteobacteria
Bartonella florencae R4(2010) [CALU]
240781
240707
-
Gly
GCC
[ENA]
¡û
>W141245886
CALV01000017
Alphaproteobacteria
Bartonella senegalensis OS02 [CALV]
26472
26398
-
Gly
GCC
[ENA]
¡û
>W141245927
CALW02000031
Alphaproteobacteria
Bartonella rattaustraliani AUST/NH4 [CALW]
23582
23656
+
Gly
GCC
[ENA]
¡û
>W141245964
CALX01000212
Alphaproteobacteria
Bartonella queenslandensis AUST/NH15 [CALX]
123
49
-
Gly
GCC
[ENA]
¡û
>W141245992
CALY02000015
Alphaproteobacteria
Bartonella rattimassiliensis 15908 [CALY]
225
151
-
Gly
GCC
[ENA]
¡û
>C08002172
AM260525
Alphaproteobacteria
Bartonella tribocorum CIP 105476 type strain:506 [AM260525]
2530958
2531032
+
Gly
GCC
[Ensembl]
¡û
>W141262292
CCBL010000009
Alphaproteobacteria
Bartonella doshiae [CCBL]
19962
19888
-
Gly
GCC
[ENA]
¡û
>W141275379
JACX01000001
Alphaproteobacteria
Bartonella grahamii ATCC 700132 [JACX]
262807
262733
-
Gly
GCC
[ENA]
¡û
>W141275421
JACY01000002
Alphaproteobacteria
Bartonella vinsonii subsp. berkhoffii ATCC 51672 [JACY]
2326
2252
-
Gly
GCC
[ENA]
¡û
>W141275554
JADB01000002
Alphaproteobacteria
Bartonella elizabethae ATCC 49927 [JADB]
62650
62724
+
Gly
GCC
[ENA]
¡û
>W141275618
JADC01000011
Alphaproteobacteria
Bartonella clarridgeiae ATCC 51734 [JADC]
132460
132534
+
Gly
GCC
[ENA]
¡û
>W141279615
JAGL01000004
Alphaproteobacteria
Aminobacter sp. J41 [JAGL]
86980
87054
+
Gly
GCC
[ENA]
¡û
>W141279616
JAGL01000004
Alphaproteobacteria
Aminobacter sp. J41 [JAGL]
87195
87269
+
Gly
GCC
[ENA]
¡û
>W141280265
JAGY01000001
Alphaproteobacteria
Bartonella doshiae ATCC 700133 [JAGY]
169020
168946
-
Gly
GCC
[ENA]
¡û
>WENV170012994
ASRQ01003529
[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
78
4
-
Gly
GCC
[ENA]
¢þ
>ENV08002551
ABPX01002278
microbial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
281
355
+
Gly
GCC
[ENA]
¡û
>WENV170234434
CEQK01060327
[CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
28871
28945
+
Gly
GCC
[ENA]
¢þ
>WENV170372346
CETS01086711
[CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
1480
1406
-
Gly
GCC
[ENA]
¢þ
>WENV170680424
LFCJ01011283
[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
1235
1161
-
Gly
GCC
[ENA]
¢þ
>WENV170682574
LFIK01000415
[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
25883
25957
+
Gly
GCC
[ENA]
¢þ
>WENV170682782
LFIK01001251
[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
9433
9507
+
Gly
GCC
[ENA]
¢þ
>WENV170682831
LFIK01001549
[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
7855
7781
-
Gly
GCC
[ENA]
¢þ
>WENV170683123
LFIK01005154
[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
1389
1315
-
Gly
GCC
[ENA]
¢þ
>WENV170683454
LFIK01011916
[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
5275
5349
+
Gly
GCC
[ENA]
¢þ
>WENV170704155
LKMJ01023838
[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
694
620
-
Gly
GCC
[ENA]
¢þ
>WENV170712562
LNFM01014927
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
916
842
-
Gly
GCC
[ENA]
¢þ
>WENV170962316
MRWF01011701
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
484
558
+
Gly
GCC
[ENA]
¢þ
>WENV170963160
MRWG01000024
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
195606
195680
+
Gly
GCC
[ENA]
¢þ
>C181037924
CP019489
Alphaproteobacteria
Bartonella sp. 1-1C [CP019489]
1416785
1416859
+
Gly
GCC
-
¡û
>C181046383
CP020742
Alphaproteobacteria
Bartonella henselae Houston-I [CP020742]
1904396
1904470
+
Gly
GCC
-
¡û
>C181067725
CP022529
Alphaproteobacteria
Labrenzia sp. VG12 [CP022529]
3911970
3911896
-
Gly
GCC
-
¡û
>C181170886
CP028960
Alphaproteobacteria
Methyloceanibacter sp. wino2 [CP028960]
1656577
1656503
-
Gly
GCC
-
¡û
>C181209325
LS483373
Alphaproteobacteria
Bartonella quintana NCTC12899 [LS483373]
1381176
1381250
+
Gly
GCC
-
¡û
>C191000406
AP017626
Alphaproteobacteria
Pleomorphomonas sp. SM30 [AP017626]
3356119
3356045
-
Gly
GCC
-
¡û
>C191188379
CP041191
Alphaproteobacteria
Labrenzia sp. PHM005 [CP041191]
1086083
1086157
+
Gly
GCC
-
¡û
>C191214153
LR134527
Alphaproteobacteria
Bartonella elizabethae NCTC12898 [LR134527]
1823411
1823485
+
Gly
GCC
-
¡û
>C191214236
LR134529
Alphaproteobacteria
Bartonella vinsonii NCTC12905 [LR134529]
188999
189073
+
Gly
GCC
-
¡û
>W141554744
JHPP01000006
Alphaproteobacteria
Bartonella bacilliformis San Pedro600-02 [JHPP]
107468
107542
+
Gly
GCC
[ENA]
¡û
>W141554783
JHPQ01000011
Alphaproteobacteria
Bartonella bacilliformis str. Heidi Mejia [JHPQ]
107905
107979
+
Gly
GCC
[ENA]
¡û
>W141554790
JHPR01000003
Alphaproteobacteria
Bartonella bacilliformis Peru-18 [JHPR]
104409
104483
+
Gly
GCC
[ENA]
¡û
>W141562726
JHZK01000011
Alphaproteobacteria
Afifella pfennigii DSM 17143 [JHZK]
9598
9524
-
Gly
GCC
[ENA]
¡û
>W09104846
AANF01000003
Alphaproteobacteria
Bartonella bacilliformis KC583 [AANF]
90234
90160
-
Gly
GCC
[ENA]
¡û
>W09118270
ACCU01000015
Alphaproteobacteria
Roseibium alexandrii DFL-11 [ACCU]
1021906
1021832
-
Gly
GCC
[ENA]
¡û
>W141712286
JMQM01000002
Alphaproteobacteria
Nitratireductor basaltis [JMQM]
245708
245634
-
Gly
GCC
[ENA]
¡û
>W141733742
JNLC01000011
Alphaproteobacteria
Bosea sp. 117 [JNLC]
419895
419969
+
Gly
GCC
[ENA]
¡û
>W1910231997
FPEI01000004
Alphaproteobacteria
Hyphomicrobium sp. CS1BSMeth3 [FPEI]
184733
184659
-
Gly
GCC
[ENA]
¡û
>W1910285146
FREW01000004
Alphaproteobacteria
Labrenzia sp. Alg231-36 [FREW]
459691
459617
-
Gly
GCC
[ENA]
¡û
>C09102301
CP001562
Alphaproteobacteria
Bartonella grahamii as4aup [CP001562]
2290028
2290102
+
Gly
GCC
[Ensembl]
¡û
>W1910828837
MWVG01000001
Alphaproteobacteria
Bartonella bovis BbUM [MWVG]
269609
269535
-
Gly
GCC
[ENA]
¡û
>W1910859314
NBYO01000001
Alphaproteobacteria
Notoacmeibacter marinus XMTR2A4 [NBYO]
1053915
1053841
-
Gly
GCC
[ENA]
¡û
>W1910942141
NJGE01000010
Alphaproteobacteria
Bartonella tribocorum L103 [NJGE]
1168
1094
-
Gly
GCC
[ENA]
¡û
>W1911143669
NPBC01000017
Alphaproteobacteria
Afifella marina DSM 2698 [NPBC]
13354
13280
-
Gly
GCC
[ENA]
¡û
>W1911148412
NPEV01000026
Alphaproteobacteria
Rhodobium orientis DSM 11290 [NPEV]
37230
37156
-
Gly
GCC
[ENA]
¡û
>W1911411011
NWUC01000006
Alphaproteobacteria
Pararhizobium haloflavum XC0140 [NWUC]
120996
120922
-
Gly
GCC
[ENA]
¡û
>W1911493266
OBEL01000003
Alphaproteobacteria
Cohaesibacter gelatinilyticus DSM 18289 [OBEL]
134547
134473
-
Gly
GCC
[ENA]
¡û
>W1911493267
OBEL01000003
Alphaproteobacteria
Cohaesibacter gelatinilyticus DSM 18289 [OBEL]
133551
133477
-
Gly
GCC
[ENA]
¡û
>W1911532385
OGUZ01000004
Alphaproteobacteria
Labrenzia sp. EL143 [OGUZ]
228127
228053
-
Gly
GCC
[ENA]
¡û
>W1911701540
QNUM01000001
Alphaproteobacteria
Cohaesibacter haloalkalitolerans JC131 [QNUM]
395767
395841
+
Gly
GCC
[ENA]
¡û
>W1911765976
QXDF01000001
Alphaproteobacteria
Dichotomicrobium thermohalophilum DSM 5002 [QXDF]
1126564
1126490
-
Gly
GCC
[ENA]
¡û
>W1810064630
PDVP01000001
Alphaproteobacteria
Zhengella mangrovi X9-2-2 [PDVP]
194994
195068
+
Gly
GCC
[ENA]
¡û
>W1810489513
QBBV01000003
Alphaproteobacteria
Acuticoccus kandeliae J103 [QBBV]
806365
806439
+
Gly
GCC
[ENA]
¡û
>W1810489558
QBBW01000006
Alphaproteobacteria
Acuticoccus yangtzensis JL1095 [QBBW]
221920
221846
-
Gly
GCC
[ENA]
¡û
>W1810624950
QHHQ01000004
Alphaproteobacteria
Acuticoccus sediminis PTG4-2 [QHHQ]
377867
377793
-
Gly
GCC
[ENA]
¡û
>W1810625989
QHKP01000004
Alphaproteobacteria
Notoacmeibacter marinus HMA008 [QHKP]
513389
513463
+
Gly
GCC
[ENA]
¡û
>W1810725522
QODK01000001
Alphaproteobacteria
Cohaesibacter intestini YE-B6 [QODK]
940629
940703
+
Gly
GCC
[ENA]
¡û
>C151002843
AP014648
Alphaproteobacteria
Methyloceanibacter caenitepidi Gela4 [AP014648]
368278
368352
+
Gly
GCC
[Ensembl]
¡û
>C151067966
CP010401
Alphaproteobacteria
Bartonella ancashensis 20.00 [CP010401]
445863
445937
+
Gly
GCC
-
¡û
>C151101975
HG965802
Alphaproteobacteria
Bartonella henselae BM1374163 [HG965802]
1854360
1854434
+
Gly
GCC
[Ensembl]
¡û
>C151102016
HG969191
Alphaproteobacteria
Bartonella henselae BM1374165 [HG969191]
1924494
1924568
+
Gly
GCC
[Ensembl]
¡û
>C151102058
HG969192
Alphaproteobacteria
Bartonella tribocorum BM1374166 [HG969192]
2521507
2521581
+
Gly
GCC
[Ensembl]
¡û
>C151105176
LN879429
Alphaproteobacteria
Bartonella henselae MVT02 [LN879429]
1854360
1854434
+
Gly
GCC
-
¡û
>ENV09003173
ADGO01008447
Compost metagenome contig00001
81
155
+
Gly
GCC
[ENA]
¡û
>W10110063
ADBQ01000002
Alphaproteobacteria
Ancylobacter novellus DSM 506 [ADBQ]
526446
526372
-
Gly
GCC
[ENA]
¡û
>C10112198
CP002026
Alphaproteobacteria
Ancylobacter novellus DSM 506 [CP002026]
3928234
3928308
+
Gly
GCC
[Ensembl]
¡û
>C11102675
FN645454
Alphaproteobacteria
Bartonella clarridgeiae 73 [FN645454]
1481845
1481919
+
Gly
GCC
[Ensembl]
¡û
>W11112500
ADBQ01000002
Alphaproteobacteria
Ancylobacter novellus DSM 506 [ADBQ]
526446
526372
-
Gly
GCC
[ENA]
¡û
>W11135861
AEFL01000058
Alphaproteobacteria
Roseibium sp. TrichSKD4 [AEFL]
501773
501699
-
Gly
GCC
[ENA]
¡û
>C161064381
CP014012
Alphaproteobacteria
Bartonella bacilliformis ATCC 35685D-5 [CP014012]
94395
94321
-
Gly
GCC
-
¡û
>W121059051
AILT01000008
Alphaproteobacteria
Bartonella sp. DB5-6 [AILT]
44649
44723
+
Gly
GCC
[ENA]
¡û
>W121059105
AILU01000023
Alphaproteobacteria
Bartonella washoeensis Sb944nv [AILU]
60787
60861
+
Gly
GCC
[ENA]
¡û
>W121059164
AILV01000008
Alphaproteobacteria
Bartonella doshiae NCTC 12862 [AILV]
169128
169054
-
Gly
GCC
[ENA]
¡û
>W121059198
AILW01000004
Alphaproteobacteria
Bartonella elizabethae Re6043vi [AILW]
62610
62684
+
Gly
GCC
[ENA]
¡û
>W121059241
AILX01000012
Alphaproteobacteria
Bartonella washoeensis 085-0475 [AILX]
241984
241910
-
Gly
GCC
[ENA]
¡û
>W121059261
AILY01000008
Alphaproteobacteria
Bartonella rattimassiliensis 15908 [AILY]
71795
71869
+
Gly
GCC
[ENA]
¡û
>W121059307
AILZ01000009
Alphaproteobacteria
Bartonella vinsonii subsp. arupensis OK-94-513 [AILZ]
235279
235205
-
Gly
GCC
[ENA]
¡û
>W121059338
AIMA01000003
Alphaproteobacteria
Bartonella melophagi K-2C [AIMA]
270039
269965
-
Gly
GCC
[ENA]
¡û
>W121059449
AIMC01000032
Alphaproteobacteria
Bartonella birtlesii LL-WM9 [AIMC]
193919
193845
-
Gly
GCC
[ENA]
¡û
>W121059459
AIMD01000013
Alphaproteobacteria
Bartonella taylorii 8TBB [AIMD]
57169
57243
+
Gly
GCC
[ENA]
¡û
>W121059531
AIME01000006
Alphaproteobacteria
Bartonella alsatica IBS 382 [AIME]
223425
223351
-
Gly
GCC
[ENA]
¡û
>W121059539
AIMF01000003
Alphaproteobacteria
Bartonella elizabethae F9251 [AIMF]
62647
62721
+
Gly
GCC
[ENA]
¡û
>W121059637
AIMH01000016
Alphaproteobacteria
Bartonella vinsonii subsp. arupensis Pm136co [AIMH]
194551
194477
-
Gly
GCC
[ENA]
¡û
>W121084675
AKIP01000035
Alphaproteobacteria
Bartonella birtlesii IBS 325 [AKIP]
17107
17181
+
Gly
GCC
[ENA]
¡û
>W1610092115
CXWA01000002
Alphaproteobacteria
Roseibium album alba [CXWA]
258461
258387
-
Gly
GCC
[ENA]
¡û
>W1610092162
CXWC01000002
Alphaproteobacteria
Roseibium album alba [CXWC]
258461
258387
-
Gly
GCC
[ENA]
¡û
>W1610092216
CXWD01000007
Alphaproteobacteria
Roseibium alexandrii [CXWD]
48186
48260
+
Gly
GCC
[ENA]
¡û
>W1610092253
CXWE01000003
Alphaproteobacteria
Roseibium album alba [CXWE]
258461
258387
-
Gly
GCC
[ENA]
¡û
>C131002076
CP003123
Alphaproteobacteria
Bartonella australis AUST/NH1 [CP003123]
1554186
1554260
+
Gly
GCC
[Ensembl]
¡û
>C131002114
CP003124
Alphaproteobacteria
Bartonella vinsonii subsp. berkhoffii str. Winnie [CP003124]
1749876
1749950
+
Gly
GCC
[Ensembl]
¡û
>C131006634
CP003784
Alphaproteobacteria
Bartonella quintana RM-11 [CP003784]
1542029
1542103
+
Gly
GCC
[Ensembl]
¡û
>W1610516187
FMBM01000001
Alphaproteobacteria
Saliniramus fredricksonii HL-109 [FMBM]
1049413
1049339
-
Gly
GCC
[ENA]
¡û
>W1610624759
LHZR01000102
Alphaproteobacteria
Gluconobacter albidus [LHZR]
2679
2605
-
Gly
GCC
[ENA]
¡û
>W1610661228
LJSX01000013
Alphaproteobacteria
Saliniramus fredricksonii HL-109 [LJSX]
80291
80365
+
Gly
GCC
[ENA]
¡û
>W1610754224
LNFG01000109
Alphaproteobacteria
Rhizobiales bacterium Ga0077555 [LNFG]
8494
8568
+
Gly
GCC
[ENA]
¡û
>W1610866763
LQWW01000001
Alphaproteobacteria
Bartonella bacilliformis [LQWW]
166654
166728
+
Gly
GCC
[ENA]
¡û
>W1610867717
LQXX01000001
Alphaproteobacteria
Bartonella bacilliformis [LQXX]
200710
200784
+
Gly
GCC
[ENA]
¡û
>W1610882060
LRIJ01000002
Alphaproteobacteria
Bartonella henselae str. Houston-1 [LRIJ]
1686346
1686420
+
Gly
GCC
[ENA]
¡û
>W1710015690
AQRB01000001
Alphaproteobacteria
Stappia sp. 22II-S9-Z10 [AQRB]
654027
654101
+
Gly
GCC
[ENA]
¡û
>W1710095472
CXWA01000002
Alphaproteobacteria
Roseibium album alba [CXWA]
258461
258387
-
Gly
GCC
[ENA]
¡û
>W1710095519
CXWC01000002
Alphaproteobacteria
Roseibium album alba [CXWC]
258461
258387
-
Gly
GCC
[ENA]
¡û
>W1710095573
CXWD01000007
Alphaproteobacteria
Roseibium alexandrii [CXWD]
48186
48260
+
Gly
GCC
[ENA]
¡û
>W1710095610
CXWE01000003
Alphaproteobacteria
Roseibium album alba [CXWE]
258461
258387
-
Gly
GCC
[ENA]
¡û
>W1710501478
FMBM01000001
Alphaproteobacteria
Saliniramus fredricksonii HL-109 [FMBM]
1049413
1049339
-
Gly
GCC
[ENA]
¡û
>W1710505320
FMTP01000008
Alphaproteobacteria
Ancylobacter rudongensis [FMTP]
159265
159191
-
Gly
GCC
[ENA]
¡û
>W1710508125
FMVW01000003
Alphaproteobacteria
Afifella marina DSM 2698 [FMVW]
398144
398218
+
Gly
GCC
[ENA]
¡û
>W1710527769
FNLG01000001
Alphaproteobacteria
Rhizobiales bacterium GAS113 [FNLG]
5324999
5324925
-
Gly
GCC
[ENA]
¡û
>W1710535683
FNSS01000001
Alphaproteobacteria
Rhizobiales bacterium GAS188 [FNSS]
5751295
5751369
+
Gly
GCC
[ENA]
¡û
>W1710535990
FNSX01000001
Alphaproteobacteria
Rhizobiales bacterium GAS191 [FNSX]
6189357
6189283
-
Gly
GCC
[ENA]
¡û
>W1710571161
FOVR01000011
Alphaproteobacteria
Cohaesibacter marisflavi [FOVR]
42435
42509
+
Gly
GCC
[ENA]
¡û
>W1710601625
FUXL01000017
Alphaproteobacteria
Consotaella salsifontis USBA 369 [FUXL]
87264
87338
+
Gly
GCC
[ENA]
¡û
>W1710606293
FWXR01000016
Alphaproteobacteria
Fulvimarina manganoxydans [FWXR]
41943
41869
-
Gly
GCC
[ENA]
¡û
>W1710721093
LFMF01000003
Alphaproteobacteria
Bartonella elizabethae [LFMF]
204068
203994
-
Gly
GCC
[ENA]
¡û
>W1710755877
LHZR01000102
Alphaproteobacteria
Gluconobacter albidus [LHZR]
2679
2605
-
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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