tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.654960 (97 seq.)
>W1710858211 LMAU01000002 Alphaproteobacteria Tsuneonella troitsensis [LMAU] 224259 224333 + Glu CTC [ENA] ¡û
>W1710864852 LMGF01000001 Alphaproteobacteria Sphingopyxis sp. Root1497 [LMGF] 18382 18456 + Glu CTC [ENA] ¡û
>W1710866208 LMHH01000001 Alphaproteobacteria Altererythrobacter sp. Root672 [LMHH] 1072130 1072204 + Glu CTC [ENA] ¡û
>W1710870810 LMKV01000001 Alphaproteobacteria Sphingobium sp. Leaf26 [LMKV] 34996 35070 + Glu CTC [ENA] ¡û
>W1711082195 LSTR01000040 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 275449 275523 + Glu CTC [ENA] ¡û
>W1711083853 LSVG01000016 Alphaproteobacteria Sphingobium yanoikuyae [LSVG] 45395 45469 + Glu CTC [ENA] ¡û
>W1711146754 LVJD01000051 Alphaproteobacteria Sphingobium yanoikuyae [LVJD] 60804 60878 + Glu CTC [ENA] ¡û
>W1711284895 LZRP01000007 Alphaproteobacteria Erythrobacter sp. QSSC1-22B [LZRP] 140227 140153 - Glu CTC [ENA] ¡û
>W1712076995 NGUN01000003 Alphaproteobacteria Sphingobium sp. GW456-12-10-14-TSB1 [NGUN] 715578 715504 - Glu CTC [ENA] ¡û
>W1712105766 NISJ01000002 Alphaproteobacteria Sphingopyxis witflariensis [NISJ] 301721 301795 + Glu CTC [ENA] ¡û
>C171047035 CP016306 Alphaproteobacteria Sphingomonas sp. KC8 [CP016306] 595089 595163 + Glu CTC - ¡û
>C171056562 CP017075 Alphaproteobacteria Novosphingobium resinovorum SA1 [CP017075] 1174992 1175066 + Glu CTC - ¡û
>W131002973 AGZU01000005 Alphaproteobacteria Sphingobium yanoikuyae ATCC 51230 [AGZU] 34273 34347 + Glu CTC [ENA] ¡û
>W131052393 AMYX01000075 Alphaproteobacteria alpha proteobacterium LLX12A [AMYX] 17251 17325 + Glu CTC [ENA] ¡û
>W131241120 BARE01000007 Alphaproteobacteria Sphingobium xenophagum NBRC 107872 [BARE] 4277 4203 - Glu CTC [ENA] ¡û
>W131251297 CAVK010000081 Alphaproteobacteria Sphingobium indicum BiD32 [CAVK] 9223 9149 - Glu CTC [ENA] ¡û
>w016537 AAQG01000012 Alphaproteobacteria Sphingomonas sp. SKA58 [AAQG] 32880 32809 - Glu CTC [ENA] ¡û
>WENV180020139 FTCV01002366 [FTCV] metagenome; soil 2789 2715 - Glu CTC [ENA] ¢þ
>WENV180692317 OCZS010465467 [OCZS] soil metagenome; soil 342 268 - Glu CTC [ENA] ¢þ
>W141077966 ATHL01000100 Alphaproteobacteria Novosphingobium lindaniclasticum LE124 [ATHL] 69179 69253 + Glu CTC [ENA] ¡û
>WENV181189813 OEOF01235706 [OEOF] activated sludge metagenome; Activated Sludge 162 88 - Glu CTC [ENA] ¢þ
>WENV181228019 OFDN01111004 [OFDN] hot springs metagenome; Water 116 42 - Glu CTC [ENA] ¢þ
>W141191353 AYOY01000156 Alphaproteobacteria Sphingobium sp. C100 [AYOY] 11778 11852 + Glu CTC [ENA] ¡û
>WENV182544882 OJBK01003896 [OJBK] seawater metagenome; Sea water 39 113 + Glu CTC [ENA] ¢þ
>WENV182547919 OJBU01001962 [OJBU] seawater metagenome; Sea water 300 226 - Glu CTC [ENA] ¢þ
>WENV182549276 OJBY01000102 [OJBY] seawater metagenome; Sea water 16509 16435 - Glu CTC [ENA] ¢þ
>WENV182558883 OJDN01010761 [OJDN] seawater metagenome; Sea water 914 840 - Glu CTC [ENA] ¢þ
>WENV182563806 OJED01000152 [OJED] seawater metagenome; Sea water 16338 16412 + Glu CTC [ENA] ¢þ
>WENV182593182 OJIT01002450 [OJIT] seawater metagenome; Sea water 555 481 - Glu CTC [ENA] ¢þ
>WENV183726624 PJTO01000033 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 176204 176278 + Glu CTC [ENA] ¢þ
>WENV183729417 PJTQ01037019 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 392 318 - Glu CTC [ENA] ¢þ
>WENV183729906 PJTR01000170 [PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment 523 449 - Glu CTC [ENA] ¢þ
>WENV183730537 PJTS01000112 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 77635 77709 + Glu CTC [ENA] ¢þ
>WENV183732714 PJTX01007731 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 483 557 + Glu CTC [ENA] ¢þ
>WENV183733028 PJTY01000022 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 161305 161231 - Glu CTC [ENA] ¢þ
>WENV183733309 PJTY01000834 [PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment 2931 2857 - Glu CTC [ENA] ¢þ
>WENV183734355 PJTZ01003077 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 270 344 + Glu CTC [ENA] ¢þ
>WENV183737037 PJUD01000281 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 18020 17946 - Glu CTC [ENA] ¢þ
>WENV183748779 PPFU01079777 [PPFU] hypolithon metagenome; Antarctic Hypolithon 515 589 + Glu CTC [ENA] ¢þ
>WENV183749565 PPFU01185893 [PPFU] hypolithon metagenome; Antarctic Hypolithon 3263 3189 - Glu CTC [ENA] ¢þ
>WENV170010302 APMI01013133 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 14166 14092 - Glu CTC [ENA] ¢þ
>WENV170010304 APMI01013171 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 2946 3020 + Glu CTC [ENA] ¢þ
>WENV170136807 CENV01078639 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2330 2404 + Glu CTC [ENA] ¢þ
>WENV170228633 CEQG01027453 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 14890 14964 + Glu CTC [ENA] ¢þ
>WENV170231138 CEQH01126467 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 346 272 - Glu CTC [ENA] ¢þ
>WENV170232621 CEQI01083782 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 815 741 - Glu CTC [ENA] ¢þ
>WENV170236528 CEQL01327792 [CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 116 42 - Glu CTC [ENA] ¢þ
>WENV170264242 CERD01016812 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5357 5431 + Glu CTC [ENA] ¢þ
>WENV170379700 CETV01192037 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 264 190 - Glu CTC [ENA] ¢þ
>WENV170475985 CEVI01057560 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 109 183 + Glu CTC [ENA] ¢þ
>WENV170555423 CXWL01000579 [CXWL] groundwater metagenome; biofilm material 54039 53965 - Glu CTC [ENA] ¢þ
>WENV170555541 CXWL01000961 [CXWL] groundwater metagenome; biofilm material 5602 5676 + Glu CTC [ENA] ¢þ
>WENV170556137 CXWL01005137 [CXWL] groundwater metagenome; biofilm material 72526 72600 + Glu CTC [ENA] ¢þ
>WENV170839363 MDSZ01184390 [MDSZ] marine metagenome; seawater 6846 6920 + Glu CTC [ENA] ¢þ
>C181047586 CP020925 Alphaproteobacteria Sphingobium yanoikuyae SHJ [CP020925] 3553482 3553556 + Glu CTC - ¡û
>C181072113 CP022745 Alphaproteobacteria Sphingobium xenophagum C1 [CP022745, CP022746] 2487037 2486963 - Glu CTC - ¡û
>C181089675 CP023741 Alphaproteobacteria Sphingobium yanoikuyae S72 [CP023741] 2112575 2112649 + Glu CTC - ¡û
>C191002769 AP018518 Alphaproteobacteria Sphingobium sp. YG1 [AP018518, AP018519] 943048 942974 - Glu CTC - ¡û
>W141520458 JGVR01000019 Alphaproteobacteria Sphingobium yanoikuyae [JGVR] 58084 58158 + Glu CTC [ENA] ¡û
>C191063625 CP029335 Alphaproteobacteria Sphingobium sp. LF-16 [CP029335] 1631173 1631247 + Glu CTC - ¡û
>C191103910 CP033230 Alphaproteobacteria Sphingobium yanoikuyae SJTF8 [CP033230] 815556 815482 - Glu CTC - ¡û
>C191163690 CP039248 Alphaproteobacteria Sphingobium sp. PAMC28499 [CP039248] 3383419 3383493 + Glu CTC - ¡û
>W141807765 JPOU01000046 Alphaproteobacteria Sphingobium yanoikuyae [JPOU] 41266 41192 - Glu CTC [ENA] ¡û
>W1910007013 BBQY01000016 Alphaproteobacteria Sphingobium xenophagum OW59 [BBQY] 77058 77132 + Glu CTC [ENA] ¡û
>W1910744362 MIAL01000026 Alphaproteobacteria Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 [MIAL] 38037 37963 - Glu CTC [ENA] ¡û
>W1911114826 NOIW01000058 Alphaproteobacteria Sphingobium sp. IP1 [NOIW] 16698 16772 + Glu CTC [ENA] ¡û
>W1911688283 QLJK01000005 Alphaproteobacteria Sphingomonas sp. S-NIH.Pt3_0716 [QLJK] 148726 148652 - Glu CTC [ENA] ¡û
>W1911722462 QRAL01000079 Alphaproteobacteria Sphingobium yanoikuyae SK-NIH.Env6_1116 [QRAL] 1011 937 - Glu CTC [ENA] ¡û
>W1911737885 QTTB01000004 Alphaproteobacteria Tsuneonella troitsensis KMM 6042 [QTTB] 998216 998290 + Glu CTC [ENA] ¡û
>W1911746102 QVRA01000015 Alphaproteobacteria Sphingobium terrigena EO9 [QVRA] 87675 87749 + Glu CTC [ENA] ¡û
>W1911823529 QZVQ01000010 Alphaproteobacteria Croceibacterium ferulae SX2RGS8 [QZVQ] 137960 137886 - Glu CTC [ENA] ¡û
>W1810400891 PYGL01000013 Alphaproteobacteria Sphingobium sp. AEW4 [PYGL] 1259 1185 - Glu CTC [ENA] ¡û
>W1810677114 QKMM01000001 Alphaproteobacteria Novosphingobium sp. B3058 49 [QKMM] 759089 759163 + Glu CTC [ENA] ¡û
>W1810725213 QOCK01000001 Alphaproteobacteria 'Sphingomonas ginsengisoli' Hoang et al. 2012 KCTC 12630 [QOCK] 481365 481439 + Glu CTC [ENA] ¡û
>W1810787260 QRDP01000004 Alphaproteobacteria Parasphingopyxis lamellibrachiae DSM 26725 [QRDP] 804690 804764 + Glu CTC [ENA] ¡û
>C151079659 CP011310 Alphaproteobacteria Aurantiacibacter atlanticus s21-N3 [CP011310] 2177666 2177740 + Glu CTC [Ensembl] ¡û
>W1510756959 JACT01000001 Alphaproteobacteria Sphingobium cupriresistens LL01 [JACT] 1304560 1304486 - Glu CTC [ENA] ¡û
>W1510941335 JFFT01000012 Alphaproteobacteria Sphingobium yanoikuyae SHJ [JFFT] 35271 35345 + Glu CTC [ENA] ¡û
>W1511398342 JTDN01000001 Alphaproteobacteria Croceibacterium mercuriale Coronado [JTDN] 1123029 1123103 + Glu CTC [ENA] ¡û
>W11167336 AFMP01000011 Alphaproteobacteria Sphingomonas sp. KC8 [AFMP] 45200 45126 - Glu CTC [ENA] ¡û
>W11176443 AFXE01000101 Alphaproteobacteria Sphingobium yanoikuyae XLDN2-5 [AFXE] 6617 6543 - Glu CTC [ENA] ¡û
>C161003380 CP005083 Alphaproteobacteria Sphingobium sp. TKS [CP005083, CP005084] 1811671 1811597 - Glu CTC [Ensembl] ¡û
>C161092723 CP015986 Alphaproteobacteria Sphingobium sp. EP60837 [CP015986, CP015987] 2492062 2491988 - Glu CTC [Ensembl] ¡û
>W1610071212 BCTW01000027 Alphaproteobacteria Novosphingobium lentum NBRC 107847 [BCTW] 9494 9420 - Glu CTC [ENA] ¡û
>W121068966 AJVL01000067 Alphaproteobacteria Sphingobium sp. AP49 [AJVL] 35912 35986 + Glu CTC [ENA] ¡û
>W121084324 AKIB01000028 Alphaproteobacteria Sphingobium xenophagum QYY [AKIB] 5001 5075 + Glu CTC [ENA] ¡û
>W1610720557 LMAU01000002 Alphaproteobacteria Tsuneonella troitsensis [LMAU] 224259 224333 + Glu CTC [ENA] ¡û
>W1610727198 LMGF01000001 Alphaproteobacteria Sphingopyxis sp. Root1497 [LMGF] 18382 18456 + Glu CTC [ENA] ¡û
>W1610728554 LMHH01000001 Alphaproteobacteria Altererythrobacter sp. Root672 [LMHH] 1072130 1072204 + Glu CTC [ENA] ¡û
>W1610733156 LMKV01000001 Alphaproteobacteria Sphingobium sp. Leaf26 [LMKV] 34996 35070 + Glu CTC [ENA] ¡û
>W1610920980 LSTR01000040 Alphaproteobacteria Sphingobium yanoikuyae [LSTR] 275449 275523 + Glu CTC [ENA] ¡û
>W1610922606 LSVG01000016 Alphaproteobacteria Sphingobium yanoikuyae [LSVG] 45395 45469 + Glu CTC [ENA] ¡û
>W1611042680 LZRP01000007 Alphaproteobacteria Erythrobacter sp. QSSC1-22B [LZRP] 140227 140153 - Glu CTC [ENA] ¡û
>W1710068577 BCTW01000027 Alphaproteobacteria Novosphingobium lentum NBRC 107847 [BCTW] 9494 9420 - Glu CTC [ENA] ¡û
>W1710542232 FNYZ01000008 Alphaproteobacteria Sphingobium sp. AP50 [FNYZ] 79157 79083 - Glu CTC [ENA] ¡û
>W1710551588 FOGE01000024 Alphaproteobacteria Sphingobium sp. YR768 [FOGE] 16453 16379 - Glu CTC [ENA] ¡û
>W1710592170 FRCG01000007 Alphaproteobacteria Sphingobium sp. YR657 [FRCG] 58440 58366 - Glu CTC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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