tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.655394 (134 seq.)
>W1711229396 LXYK01000003 Alphaproteobacteria Sulfitobacter pontiacus [LXYK] 118851 118925 + Asn GTT [ENA] ¡û
>W1711229479 LXYM01000001 Alphaproteobacteria Sulfitobacter geojensis [LXYM] 324640 324714 + Asn GTT [ENA] ¡û
>W1711744301 MUHR01000006 Alphaproteobacteria Planktotalea arctica IMCC9565 [MUHR] 35187 35113 - Asn GTT [ENA] ¡û
>C171064533 CP017622 Alphaproteobacteria Ketogulonicigenium vulgare SPU B805 [CP017622] 1561417 1561491 + Asn GTT - ¡û
>C171101170 CP019937 Alphaproteobacteria Ketogulonicigenium robustum SPU_B003 [CP019937] 1014210 1014136 - Asn GTT - ¡û
>C171118965 CP021431 Alphaproteobacteria Yoonia vestfoldensis SMR4r [CP021431] 1435328 1435254 - Asn GTT - ¡û
>W131180838 ARNL01000029 Alphaproteobacteria Yoonia vestfoldensis DSM 16212 [ARNL] 63463 63389 - Asn GTT [ENA] ¡û
>w023681 AAYB01000003 Alphaproteobacteria Roseobacter sp. CCS2 [AAYB] 389553 389477 - Asn GTT [ENA] ¡û
>w023576 AAXZ01000002 Alphaproteobacteria Rhodobacteraceae bacterium HTCC2150 HTCC2150 [AAXZ] 54528 54604 + Asn GTT [ENA] ¡û
>w012744 AAMS01000005 Alphaproteobacteria Yoonia vestfoldensis SKA53 [AAMS] 61326 61250 - Asn GTT [ENA] ¡û
>w012000 AALZ01000004 Alphaproteobacteria Sulfitobacter sp. NAS-14.1 [AALZ] 407011 406935 - Asn GTT [ENA] ¡û
>w011810 AALV01000010 Alphaproteobacteria Sulfitobacter sp. EE-36 [AALV] 242 166 - Asn GTT [ENA] ¡û
>WENV180051502 MPLU02219633 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2890 2964 + Asn GTT [ENA] ¢þ
>WENV180068389 MPLZ02045073 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 291 217 - Asn GTT [ENA] ¢þ
>WENV180091568 MPMF02203488 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 472 398 - Asn GTT [ENA] ¢þ
>WENV180109198 OAPJ01026285 [OAPJ] marine metagenome; ENVO 00002150 307 381 + Asn GTT [ENA] ¢þ
>W141171291 AXZR01000001 Alphaproteobacteria Sulfitobacter pontiacus 3SOLIMAR09 [AXZR] 14975 15049 + Asn GTT [ENA] ¡û
>WENV182541765 OJAU01001242 [OJAU] seawater metagenome; Sea water 2678 2604 - Asn GTT [ENA] ¢þ
>WENV182543035 OJAZ01018801 [OJAZ] seawater metagenome; Sea water 155 81 - Asn GTT [ENA] ¢þ
>WENV182543871 OJBD01000317 [OJBD] seawater metagenome; Sea water 6488 6562 + Asn GTT [ENA] ¢þ
>WENV182543885 OJBD01000456 [OJBD] seawater metagenome; Sea water 2957 3031 + Asn GTT [ENA] ¢þ
>WENV182544117 OJBE01000796 [OJBE] seawater metagenome; Sea water 2790 2716 - Asn GTT [ENA] ¢þ
>WENV182546085 OJBO01000807 [OJBO] seawater metagenome; Sea water 8512 8438 - Asn GTT [ENA] ¢þ
>WENV182546755 OJBP01002198 [OJBP] seawater metagenome; Sea water 885 959 + Asn GTT [ENA] ¢þ
>WENV182547134 OJBR01001980 [OJBR] seawater metagenome; Sea water 2579 2505 - Asn GTT [ENA] ¢þ
>WENV182549530 OJBY01001765 [OJBY] seawater metagenome; Sea water 3267 3193 - Asn GTT [ENA] ¢þ
>WENV182549866 OJBZ01000156 [OJBZ] seawater metagenome; Sea water 18085 18159 + Asn GTT [ENA] ¢þ
>WENV182555724 OJDD01000133 [OJDD] seawater metagenome; Sea water 5129 5203 + Asn GTT [ENA] ¢þ
>WENV182557685 OJDK01002201 [OJDK] seawater metagenome; Sea water 2410 2336 - Asn GTT [ENA] ¢þ
>WENV182560824 OJDV01000022 [OJDV] seawater metagenome; Sea water 160966 161040 + Asn GTT [ENA] ¢þ
>WENV182560826 OJDV01000025 [OJDV] seawater metagenome; Sea water 44142 44216 + Asn GTT [ENA] ¢þ
>WENV182563930 OJED01003847 [OJED] seawater metagenome; Sea water 387 313 - Asn GTT [ENA] ¢þ
>WENV182566845 OJEM01012742 [OJEM] seawater metagenome; Sea water 114 40 - Asn GTT [ENA] ¢þ
>WENV182567053 OJEN01000997 [OJEN] seawater metagenome; Sea water 1671 1745 + Asn GTT [ENA] ¢þ
>WENV182576355 OJFX01013403 [OJFX] seawater metagenome; Sea water 642 568 - Asn GTT [ENA] ¢þ
>WENV182581615 OJGX01021131 [OJGX] seawater metagenome; Sea water 405 331 - Asn GTT [ENA] ¢þ
>WENV182583788 OJHE01007861 [OJHE] seawater metagenome; Sea water 133 59 - Asn GTT [ENA] ¢þ
>WENV182586042 OJHJ01000418 [OJHJ] seawater metagenome; Sea water 10065 9991 - Asn GTT [ENA] ¢þ
>W141284752 JAMC01000010 Alphaproteobacteria Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 [JAMC] 7316 7242 - Asn GTT [ENA] ¡û
>W141284761 JAMD01000001 Alphaproteobacteria Pseudosulfitobacter pseudonitzschiae H3 [JAMD] 270675 270749 + Asn GTT [ENA] ¡û
>W141290127 JASC01000014 Alphaproteobacteria Sulfitobacter noctilucae NB-68 [JASC] 1226971 1227045 + Asn GTT [ENA] ¡û
>W141290168 JASD01000008 Alphaproteobacteria Sulfitobacter noctilucicola NB-77 [JASD] 3082312 3082238 - Asn GTT [ENA] ¡û
>W141290203 JASE01000005 Alphaproteobacteria Sulfitobacter geojensis MM-124 [JASE] 2453911 2453985 + Asn GTT [ENA] ¡û
>W141290243 JASF01000005 Alphaproteobacteria Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 [JASF] 2955280 2955206 - Asn GTT [ENA] ¡û
>W141290276 JASG01000004 Alphaproteobacteria Sulfitobacter guttiformis KCTC 32187 [JASG] 1593217 1593291 + Asn GTT [ENA] ¡û
>W141290277 JASG01000004 Alphaproteobacteria Sulfitobacter guttiformis KCTC 32187 [JASG] 1637491 1637565 + Asn GTT [ENA] ¡û
>W141290340 JASH01000014 Alphaproteobacteria Sulfitobacter mediterraneus KCTC 32188 [JASH] 372278 372204 - Asn GTT [ENA] ¡û
>WENV183056543 OLHJ01000681 [OLHJ] seawater metagenome; Sea water 3364 3438 + Asn GTT [ENA] ¢þ
>WENV183057430 OLHL01002092 [OLHL] seawater metagenome; Sea water 4074 4000 - Asn GTT [ENA] ¢þ
>WENV183065002 OLII01009007 [OLII] seawater metagenome; Sea water 523 597 + Asn GTT [ENA] ¢þ
>WENV183807489 PVBE011203811 [PVBE] marine metagenome; water 37688 37614 - Asn GTT [ENA] ¢þ
>WENV170023050 BCQK01112152 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 470 396 - Asn GTT [ENA] ¢þ
>WENV170023229 BCQK01169997 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 33 107 + Asn GTT [ENA] ¢þ
>WENV170023575 BCQL01000016 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 9355 9429 + Asn GTT [ENA] ¢þ
>WENV170024317 BCQL01042156 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 540 614 + Asn GTT [ENA] ¢þ
>WENV170024505 BCQL01069557 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 383 309 - Asn GTT [ENA] ¢þ
>WENV170024786 BCQL01127289 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 454 380 - Asn GTT [ENA] ¢þ
>WENV170155569 CEOG01047388 [CEOG] marine metagenome genome assembly TARA_034_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 113 187 + Asn GTT [ENA] ¢þ
>WENV170229415 CEQG01116887 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 226 300 + Asn GTT [ENA] ¢þ
>WENV170256882 CEQX01140307 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 397 323 - Asn GTT [ENA] ¢þ
>WENV170266593 CERE01090155 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 270 344 + Asn GTT [ENA] ¢þ
>WENV170271429 CERJ01014705 [CERJ] marine metagenome genome assembly TARA_066_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 341 267 - Asn GTT [ENA] ¢þ
>WENV170307943 CESK01035303 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 285 211 - Asn GTT [ENA] ¢þ
>WENV170325697 CEST01043617 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1187 1261 + Asn GTT [ENA] ¢þ
>W141426674 JEMU01000001 Alphaproteobacteria Sulfitobacter mediterraneus [JEMU] 103774 103848 + Asn GTT [ENA] ¡û
>WENV170535254 CEWP01038740 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 687 761 + Asn GTT [ENA] ¢þ
>WENV170579672 FUFK010040289 [FUFK] metagenome; unknown 14974 15048 + Asn GTT [ENA] ¢þ
>WENV170583011 FUFK010118964 [FUFK] metagenome; unknown 14974 15048 + Asn GTT [ENA] ¢þ
>WENV170603397 FUWD010307539 [FUWD] metagenome; unknown 386 460 + Asn GTT [ENA] ¢þ
>WENV170646550 JQIA01000009 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 93104 93030 - Asn GTT [ENA] ¢þ
>WENV170672398 LAZR01000112 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 8488 8562 + Asn GTT [ENA] ¢þ
>WENV170672639 LAZR01000572 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 20439 20365 - Asn GTT [ENA] ¢þ
>WENV170759344 LUMS01014592 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 1308 1234 - Asn GTT [ENA] ¢þ
>WENV170781838 MAAC01001850 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 2525 2599 + Asn GTT [ENA] ¢þ
>WENV170781902 MAAC01004048 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 3288 3214 - Asn GTT [ENA] ¢þ
>WENV170782081 MAAC01008084 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 10506 10432 - Asn GTT [ENA] ¢þ
>WENV170820131 MDSX01106818 [MDSX] marine metagenome; seawater 2049 2123 + Asn GTT [ENA] ¢þ
>C181064509 CP022415 Alphaproteobacteria Pseudosulfitobacter pseudonitzschiae SMR1 [CP022415] 1431179 1431105 - Asn GTT - ¡û
>C181123364 CP025804 Alphaproteobacteria Sulfitobacter sp. SK012 [CP025804] 2134269 2134195 - Asn GTT - ¡û
>C181123403 CP025808 Alphaproteobacteria Sulfitobacter sp. SK025 [CP025808] 1824281 1824207 - Asn GTT - ¡û
>C191182596 CP040753 Alphaproteobacteria Sulfitobacter sp. BSw21498 [CP040753] 1064310 1064384 + Asn GTT - ¡û
>W141564904 JIBC01000007 Alphaproteobacteria Sulfitobacter sp. 20_GPM-1509m [JIBC] 150428 150354 - Asn GTT [ENA] ¡û
>W09112267 ABXS01000028 Alphaproteobacteria Roseobacter sp. GAI101 [ABXS] 25303 25377 + Asn GTT [ENA] ¡û
>W141807913 JPOY01000011 Alphaproteobacteria Sulfitobacter sp. CB2047 [JPOY] 1241056 1240982 - Asn GTT [ENA] ¡û
>W1910285092 FREV01000002 Alphaproteobacteria Loktanella sp. Alg231-35 [FREV] 497292 497366 + Asn GTT [ENA] ¡û
>W1910693605 MDGM01000012 Alphaproteobacteria Amylibacter kogurei 4G11 [MDGM] 1170346 1170272 - Asn GTT [ENA] ¡û
>W1910814089 MVIP01000001 Alphaproteobacteria Sulfitobacter pontiacus SAORIC-395 [MVIP] 397691 397765 + Asn GTT [ENA] ¡û
>W1911539385 OMPT01000010 Alphaproteobacteria Sulfitobacter mediterraneus EL44 [OMPT] 645072 644998 - Asn GTT [ENA] ¡û
>W1810102044 PGTY01000001 Alphaproteobacteria Yoonia maricola DSM 29128 [PGTY] 583503 583429 - Asn GTT [ENA] ¡û
>W1810112292 PHJF01000001 Alphaproteobacteria Epibacterium ulvae U95 [PHJF] 428521 428447 - Asn GTT [ENA] ¡û
>W1810112321 PHJF01000017 Alphaproteobacteria Epibacterium ulvae U95 [PHJF] 20863 20789 - Asn GTT [ENA] ¡û
>W1810185209 PKFN01000007 Alphaproteobacteria Yoonia maritima YPC211 [PKFN] 750419 750345 - Asn GTT [ENA] ¡û
>W1810364932 PVTP01000020 Alphaproteobacteria Yoonia maritima DSM 101533 [PVTP] 17314 17240 - Asn GTT [ENA] ¡û
>W1810424152 PYUG01000007 Alphaproteobacteria Sulfitobacter sp. CB-A [PYUG] 1241056 1240982 - Asn GTT [ENA] ¡û
>W1810494764 QBFE01000021 Alphaproteobacteria Sulfitobacter sp. DFL-23 [QBFE] 20807 20733 - Asn GTT [ENA] ¡û
>W1810494791 QBFF01000026 Alphaproteobacteria Pseudosulfitobacter sp. DSM 107133 PIC-76 [QBFF] 3404 3330 - Asn GTT [ENA] ¡û
>W1810504299 QBKU01000002 Alphaproteobacteria Sulfitobacter mediterraneus DSM 12244 [QBKU] 78149 78223 + Asn GTT [ENA] ¡û
>W1810514023 QBUD01000001 Alphaproteobacteria Yoonia sediminilitoris DSM 29955 [QBUD] 867006 866932 - Asn GTT [ENA] ¡û
>W1810658625 QJJL01000002 Alphaproteobacteria Loktanella sp. PT4BL [QJJL] 346467 346541 + Asn GTT [ENA] ¡û
>W1810735821 QOLB01000155 Alphaproteobacteria Candidatus Halocynthiibacter alkanivorans Bin25-node5 [QOLB] 29280 29206 - Asn GTT [ENA] ¡û
>W1810759642 QPJP01000001 Alphaproteobacteria Yoonia sediminilitoris CECT 8284 [QPJP] 867006 866932 - Asn GTT [ENA] ¡û
>SRA1045698 SRR035093.152250 454 Sequencing (SRP001814) 383 457 + Asn GTT [SRA]
>SRA1052909 SRR035098.298392 454 Sequencing (SRP001819) 151 225 + Asn GTT [SRA]
>SRA1053852 SRR035098.514926 454 Sequencing (SRP001819) 46 120 + Asn GTT [SRA]
>W1510647408 CVPC01000002 Alphaproteobacteria Nereida ignava CECT 5292 [CVPC] 347393 347467 + Asn GTT [ENA] ¡û
>W1510650103 CVQV01000002 Alphaproteobacteria Nereida ignava CECT 5292 [CVQV] 347393 347467 + Asn GTT [ENA] ¡û
>C11111801 CP002018 Alphaproteobacteria Ketogulonicigenium vulgare WSH-001 [CP002018] 1016973 1017047 + Asn GTT [Ensembl] ¡û
>C11111867 CP002224 Alphaproteobacteria Ketogulonicigenium vulgare Y25 [CP002224] 1423248 1423322 + Asn GTT [Ensembl] ¡û
>W1511518649 JXYE01000002 Alphaproteobacteria Loktanella sp. S4079 [JXYE] 649678 649752 + Asn GTT [ENA] ¡û
>W1511698446 LGHU01000037 Alphaproteobacteria Pseudorhodobacter antarcticus KCTC 23700 [LGHU] 1116 1042 - Asn GTT [ENA] ¡û
>C161047258 CP012908 Alphaproteobacteria Ketogulonicigenium vulgare Hbe602 [CP012908] 1407354 1407428 + Asn GTT - ¡û
>C161099985 CP016592 Alphaproteobacteria Ketogulonicigenium vulgare SKV [CP016592] 1407166 1407240 + Asn GTT - ¡û
>W1610628524 LIGP01000001 Alphaproteobacteria Loktanella sp. 1ANDIMAR09 [LIGP] 708025 707951 - Asn GTT [ENA] ¡û
>W1610641259 LJAK01000008 Alphaproteobacteria Loktanella sp. 3ANDIMAR09 [LJAK] 53670 53596 - Asn GTT [ENA] ¡û
>W1610641282 LJAL01000002 Alphaproteobacteria Loktanella sp. 5RATIMAR09 [LJAL] 449542 449468 - Asn GTT [ENA] ¡û
>W1611013266 LXYK01000003 Alphaproteobacteria Sulfitobacter pontiacus [LXYK] 118851 118925 + Asn GTT [ENA] ¡û
>W1611013349 LXYM01000001 Alphaproteobacteria Sulfitobacter geojensis [LXYM] 324640 324714 + Asn GTT [ENA] ¡û
>W1710508607 FMWG01000003 Alphaproteobacteria Epibacterium ulvae [FMWG] 372290 372364 + Asn GTT [ENA] ¡û
>W1710508638 FMWG01000020 Alphaproteobacteria Epibacterium ulvae [FMWG] 10766 10840 + Asn GTT [ENA] ¡û
>W1710524978 FNJD01000026 Alphaproteobacteria Sulfitobacter litoralis [FNJD] 33640 33566 - Asn GTT [ENA] ¡û
>W1710528247 FNNB01000002 Alphaproteobacteria Sulfitobacter pontiacus [FNNB] 399346 399420 + Asn GTT [ENA] ¡û
>W1710529859 FNOI01000003 Alphaproteobacteria Litoreibacter albidus [FNOI] 102275 102349 + Asn GTT [ENA] ¡û
>W1710546636 FOCI01000013 Alphaproteobacteria Loktanella fryxellensis [FOCI] 104772 104846 + Asn GTT [ENA] ¡û
>W1710546978 FOCO01000055 Alphaproteobacteria Pseudorhodobacter antarcticus [FOCO] 563 489 - Asn GTT [ENA] ¡û
>W1710549241 FOEJ01000007 Alphaproteobacteria Loktanella sp. DSM 29012 [FOEJ] 22656 22582 - Asn GTT [ENA] ¡û
>W1710566452 FORZ01000005 Alphaproteobacteria Nereida ignava DSM 16309 [FORZ] 157640 157714 + Asn GTT [ENA] ¡û
>W1710568006 FOTF01000005 Alphaproteobacteria Loktanella salsilacus [FOTF] 213554 213628 + Asn GTT [ENA] ¡û
>W1710574874 FOYP01000001 Alphaproteobacteria Yoonia tamlensis [FOYP] 1253122 1253196 + Asn GTT [ENA] ¡û
>W1710575785 FOZM01000001 Alphaproteobacteria Yoonia litorea [FOZM] 1233205 1233279 + Asn GTT [ENA] ¡û
>W1710576926 FPAJ01000001 Alphaproteobacteria Sulfitobacter marinus [FPAJ] 1021847 1021921 + Asn GTT [ENA] ¡û
>W1710582676 FQUE01000001 Alphaproteobacteria Loktanella atrilutea [FQUE] 1300 1226 - Asn GTT [ENA] ¡û
>W1710583493 FQUV01000002 Alphaproteobacteria Litoreibacter ascidiaceicola [FQUV] 291528 291454 - Asn GTT [ENA] ¡û
>W1710584515 FQVP01000001 Alphaproteobacteria Pseudosulfitobacter pseudonitzschiae [FQVP] 649223 649149 - Asn GTT [ENA] ¡û
>W1710600111 FTPR01000001 Alphaproteobacteria Yoonia rosea [FTPR] 695136 695062 - Asn GTT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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