Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.655695 (131 seq.)
	>W131226390	AUEI01000004	Bacillota	Lactobacillus psittaci DSM 15354 [AUEI]	316859	316786	-	Glu	TTC	[ENA]	○
	>W1711372481	MDTN01000007	Bacillota	Lactobacillus jensenii [MDTN]	97440	97367	-	Glu	TTC	[ENA]	○
	>W1711372508	MDTN01000025	Bacillota	Lactobacillus jensenii [MDTN]	73019	72948	-	Glu	TTC	[ENA]	○
	>W1712039824	NFJY01000024	Bacillota	Lactobacillus johnsonii [NFJY]	2688	2761	+	Glu	TTC	[ENA]	○
	>W1712039836	NFJY01000033	Bacillota	Lactobacillus johnsonii [NFJY]	306	379	+	Glu	TTC	[ENA]	○
	>C171084498	CP018809	Bacillota	Lactobacillus jensenii SNUV360 [CP018809]	506205	506278	+	Glu	TTC	-	○
	>C171084529	CP018809	Bacillota	Lactobacillus jensenii SNUV360 [CP018809]	1335969	1335898	-	Glu	TTC	-	○
	>C171121862	CP021703	Bacillota	Lactobacillus johnsonii UMNLJ21 [CP021703]	401006	401079	+	Glu	TTC	-	○
	>C171121903	CP021703	Bacillota	Lactobacillus johnsonii UMNLJ21 [CP021703]	1472191	1472118	-	Glu	TTC	-	○
	>C171121918	CP021704	Bacillota	Lactobacillus johnsonii UMNLJ22 [CP021704]	1007946	1008019	+	Glu	TTC	-	○
	>C171121953	CP021704	Bacillota	Lactobacillus johnsonii UMNLJ22 [CP021704]	120651	120578	-	Glu	TTC	-	○
	>W131226373	AUEI01000001	Bacillota	Lactobacillus psittaci DSM 15354 [AUEI]	6081	6152	+	Glu	TTC	[ENA]	○
	>WENV180810527	ODJL01000009	[ODJL] human metagenome; G_DNA_Posterior fornix		260	187	-	Glu	TTC	[ENA]	◯
	>WENV180845109	ODKS01000006	[ODKS] human metagenome; G_DNA_Posterior fornix		8716	8787	+	Glu	TTC	[ENA]	◯
	>WENV180845144	ODKS01000031	[ODKS] human metagenome; G_DNA_Posterior fornix		27623	27550	-	Glu	TTC	[ENA]	◯
	>WENV180887161	ODMF01003850	[ODMF] human metagenome; G_DNA_Posterior fornix		1	72	+	Glu	TTC	[ENA]	◯
	>WENV180912578	ODSK01000032	[ODSK] human metagenome; G_DNA_Posterior fornix		19102	19029	-	Glu	TTC	[ENA]	◯
	>WENV180912580	ODSK01000051	[ODSK] human metagenome; G_DNA_Posterior fornix		3343	3272	-	Glu	TTC	[ENA]	◯
	>WENV180914405	ODSW01000215	[ODSW] human metagenome; G_DNA_Posterior fornix		4079	4150	+	Glu	TTC	[ENA]	◯
	>W141094674	AVCU01000011	Bacillota	Lactobacillus jensenii MD IIE-70(2) [AVCU]	4884	4955	+	Glu	TTC	[ENA]	○
	>WENV181131336	OEGB01000029	[OEGB] human metagenome; G_DNA_Posterior fornix		236	309	+	Glu	TTC	[ENA]	◯
	>W141246043	CALZ01000047	Bacillota	Lactobacillus equicursoris 66c [CALZ]	260	331	+	Glu	TTC	[ENA]	○
	>W141246072	CALZ01000116	Bacillota	Lactobacillus equicursoris 66c [CALZ]	1097	1024	-	Glu	TTC	[ENA]	○
	>W141246097	CALZ01000161	Bacillota	Lactobacillus equicursoris 66c [CALZ]	3037	2964	-	Glu	TTC	[ENA]	○
	>W141246111	CAMA01000056	Bacillota	Lactobacillus equicursoris CIP 110162 [CAMA]	27150	27223	+	Glu	TTC	[ENA]	○
	>W141246128	CAMA01000109	Bacillota	Lactobacillus equicursoris CIP 110162 [CAMA]	260	331	+	Glu	TTC	[ENA]	○
	>W141246137	CAMA01000145	Bacillota	Lactobacillus equicursoris CIP 110162 [CAMA]	1092	1021	-	Glu	TTC	[ENA]	○
	>WENV183772796	PPYF01020856	[PPYF] human gut metagenome; stool from patient with Crohn's disease		1573	1500	-	Glu	TTC	[ENA]	◯
	>WENV170638112	JFBN01430807	[JFBN] chicken gut metagenome; ceca of Broiler chicken		1405	1332	-	Glu	TTC	[ENA]	◯
	>C191078754	CP031701	Bacillota	Lactobacillus johnsonii IDCC9203 [CP031701]	842853	842780	-	Glu	TTC	-	○
	>W09122997	ACGQ01000034	Bacillota	Lactobacillus jensenii JV-V16 [ACGQ]	183	256	+	Glu	TTC	[ENA]	○
	>W09123020	ACGQ01000052	Bacillota	Lactobacillus jensenii JV-V16 [ACGQ]	4582	4511	-	Glu	TTC	[ENA]	○
	>W09123067	ACGR01000044	Bacillota	Lactobacillus johnsonii ATCC 33200 [ACGR]	76083	76010	-	Glu	TTC	[ENA]	○
	>W09133300	ACOY01000025	Bacillota	Lactobacillus jensenii 269-3 [ACOY]	184	257	+	Glu	TTC	[ENA]	○
	>W09133325	ACOY01000047	Bacillota	Lactobacillus jensenii 269-3 [ACOY]	21212	21141	-	Glu	TTC	[ENA]	○
	>W1910177112	BJDN01000003	Bacillota	Loigolactobacillus binensis 735-2 [BJDN]	4223	4296	+	Glu	TTC	[ENA]	○
	>W1910841799	NAES01000002	Bacillota	Loigolactobacillus backii VTT E-123217 [NAES]	2248489	2248416	-	Glu	TTC	[ENA]	○
	>W1910841818	NAET01000005	Bacillota	Loigolactobacillus backii L101 [NAET]	86462	86389	-	Glu	TTC	[ENA]	○
	>W1910918398	NIBA01000036	Bacillota	Lactobacillus johnsonii UMNLJ50 [NIBA]	3011	2938	-	Glu	TTC	[ENA]	○
	>W1910918459	NIBB01000058	Bacillota	Lactobacillus johnsonii UMNLJ54 [NIBB]	1234	1307	+	Glu	TTC	[ENA]	○
	>W1910918471	NIBB01000089	Bacillota	Lactobacillus johnsonii UMNLJ54 [NIBB]	3010	2937	-	Glu	TTC	[ENA]	○
	>W1910918489	NIBC01000042	Bacillota	Lactobacillus johnsonii UMNLJ95 [NIBC]	3091	3018	-	Glu	TTC	[ENA]	○
	>W1910918567	NIBD01000065	Bacillota	Lactobacillus johnsonii UMNLJ114 [NIBD]	3023	2950	-	Glu	TTC	[ENA]	○
	>W1911569295	PCYR01000039	Bacillota	Lactobacillus sp. UMNPBX19 [PCYR]	6526	6453	-	Glu	TTC	[ENA]	○
	>W1911569307	PCYR01000052	Bacillota	Lactobacillus sp. UMNPBX19 [PCYR]	3047	2974	-	Glu	TTC	[ENA]	○
	>W1911570329	PCZK01000119	Bacillota	Lactobacillus johnsonii UMNLJ94 [PCZK]	3010	2937	-	Glu	TTC	[ENA]	○
	>W1810049894	PCZJ01000062	Bacillota	Lactobacillus johnsonii UMNLJ113 [PCZJ]	3022	2949	-	Glu	TTC	[ENA]	○
	>W1810190562	PKJY01000005	Bacillota	Lactobacillus jensenii UMB0077 [PKJY]	59669	59598	-	Glu	TTC	[ENA]	○
	>W1810190581	PKJY01000025	Bacillota	Lactobacillus jensenii UMB0077 [PKJY]	19141	19068	-	Glu	TTC	[ENA]	○
	>W1810190603	PKJZ01000005	Bacillota	Lactobacillus jensenii UMB0007 [PKJZ]	4584	4655	+	Glu	TTC	[ENA]	○
	>W1810190633	PKJZ01000030	Bacillota	Lactobacillus jensenii UMB0007 [PKJZ]	18453	18380	-	Glu	TTC	[ENA]	○
	>W1810584496	QFBA01000030	Bacillota	Lactobacillus johnsonii CRL1647 [QFBA]	134639	134566	-	Glu	TTC	[ENA]	○
	>W10101935	ACOF01000001	Bacillota	Lactobacillus jensenii 27-2-CHN [ACOF]	5582	5653	+	Glu	TTC	[ENA]	○
	>W10101952	ACOF01000022	Bacillota	Lactobacillus jensenii 27-2-CHN [ACOF]	23090	23017	-	Glu	TTC	[ENA]	○
	>W10103224	ACQD01000009	Bacillota	Lactobacillus jensenii SJ-7A-US [ACQD]	19046	18973	-	Glu	TTC	[ENA]	○
	>W10103243	ACQD01000064	Bacillota	Lactobacillus jensenii SJ-7A-US [ACQD]	54060	53989	-	Glu	TTC	[ENA]	○
	>W10103466	ACQN01000013	Bacillota	Lactobacillus jensenii 115-3-CHN [ACQN]	23090	23017	-	Glu	TTC	[ENA]	○
	>W10103483	ACQN01000014	Bacillota	Lactobacillus jensenii 115-3-CHN [ACQN]	5582	5653	+	Glu	TTC	[ENA]	○
	>W10112246	ADEX01000093	Bacillota	Lactobacillus jensenii 208-1 [ADEX]	3377	3304	-	Glu	TTC	[ENA]	○
	>W10112252	ADEX01000113	Bacillota	Lactobacillus jensenii 208-1 [ADEX]	12658	12585	-	Glu	TTC	[ENA]	○
	>W10112271	ADEX01000186	Bacillota	Lactobacillus jensenii 208-1 [ADEX]	1	72	+	Glu	TTC	[ENA]	○
	>C10108395	FN298497	Bacillota	Lactobacillus johnsonii FI9785 [FN298497]	460837	460910	+	Glu	TTC	[Ensembl]	○
	>C10108419	FN298497	Bacillota	Lactobacillus johnsonii FI9785 [FN298497]	1488144	1488071	-	Glu	TTC	[Ensembl]	○
	>W11102091	ACOF01000001	Bacillota	Lactobacillus jensenii 27-2-CHN [ACOF]	5582	5653	+	Glu	TTC	[ENA]	○
	>W11102108	ACOF01000022	Bacillota	Lactobacillus jensenii 27-2-CHN [ACOF]	23090	23017	-	Glu	TTC	[ENA]	○
	>W11103380	ACQD01000009	Bacillota	Lactobacillus jensenii SJ-7A-US [ACQD]	19046	18973	-	Glu	TTC	[ENA]	○
	>W11103399	ACQD01000064	Bacillota	Lactobacillus jensenii SJ-7A-US [ACQD]	54060	53989	-	Glu	TTC	[ENA]	○
	>W11103622	ACQN01000013	Bacillota	Lactobacillus jensenii 115-3-CHN [ACQN]	23090	23017	-	Glu	TTC	[ENA]	○
	>W11103639	ACQN01000014	Bacillota	Lactobacillus jensenii 115-3-CHN [ACQN]	5582	5653	+	Glu	TTC	[ENA]	○
	>W11115467	ADEX01000093	Bacillota	Lactobacillus jensenii 208-1 [ADEX]	3377	3304	-	Glu	TTC	[ENA]	○
	>W11115473	ADEX01000113	Bacillota	Lactobacillus jensenii 208-1 [ADEX]	12658	12585	-	Glu	TTC	[ENA]	○
	>W11115492	ADEX01000186	Bacillota	Lactobacillus jensenii 208-1 [ADEX]	1	72	+	Glu	TTC	[ENA]	○
	>C161074705	CP014623	Bacillota	Loigolactobacillus backii TMW 1.1988 [CP014623]	299026	299099	+	Glu	TTC	-	○
	>C161079053	CP014873	Bacillota	Loigolactobacillus backii TMW 1.1989 [CP014873]	57159	57086	-	Glu	TTC	[Ensembl]	○
	>C161079058	CP014881	Bacillota	Loigolactobacillus backii TMW 1.1991 [CP014881]	294848	294921	+	Glu	TTC	-	○
	>C161079122	CP014890	Bacillota	Loigolactobacillus backii TMW 1.1992 [CP014890]	296738	296811	+	Glu	TTC	-	○
	>C161079187	CP014899	Bacillota	Loigolactobacillus backii TMW 1.2002 [CP014899]	1030217	1030290	+	Glu	TTC	-	○
	>W1610033436	AZCY01000002	Bacillota	Lactobacillus johnsonii ATCC 33200 [AZCY]	260	333	+	Glu	TTC	[ENA]	○
	>W1610034505	AZDU01000011	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]	36285	36214	-	Glu	TTC	[ENA]	○
	>W1610034510	AZDU01000026	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]	27113	27186	+	Glu	TTC	[ENA]	○
	>W1610034519	AZDU01000051	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]	325	396	+	Glu	TTC	[ENA]	○
	>W1610035811	AZEU01000237	Bacillota	Lacticaseibacillus manihotivorans DSM 13343 = JCM 12514 [AZEU]	242	314	+	Glu	TTC	[ENA]	○
	>W1610036120	AZFB01000001	Bacillota	Lactobacillus psittaci DSM 15354 [AZFB]	231	304	+	Glu	TTC	[ENA]	○
	>W1610037283	AZFX01000092	Bacillota	Lapidilactobacillus concavus DSM 17758 [AZFX]	781	854	+	Glu	TTC	[ENA]	○
	>W1610039462	AZNM01000002	Bacillota	Lactobacillus jensenii IM18-3 [AZNM]	1066	1139	+	Glu	TTC	[ENA]	○
	>W1610039476	AZNM01000027	Bacillota	Lactobacillus jensenii IM18-3 [AZNM]	259	188	-	Glu	TTC	[ENA]	○
	>W1610039502	AZNN01000008	Bacillota	Lactobacillus jensenii IM18-1 [AZNN]	4184	4255	+	Glu	TTC	[ENA]	○
	>W1610039538	AZNN01000088	Bacillota	Lactobacillus jensenii IM18-1 [AZNN]	1090	1163	+	Glu	TTC	[ENA]	○
	>W1610039550	AZNO01000002	Bacillota	Lactobacillus jensenii IM11 [AZNO]	10967	11040	+	Glu	TTC	[ENA]	○
	>W1610039621	AZRC01000010	Bacillota	Lactobacillus jensenii IM59 [AZRC]	40463	40390	-	Glu	TTC	[ENA]	○
	>W1610039645	AZRC01000026	Bacillota	Lactobacillus jensenii IM59 [AZRC]	5661	5732	+	Glu	TTC	[ENA]	○
	>W1610039674	AZRD01000012	Bacillota	Lactobacillus jensenii IM1 [AZRD]	4432	4503	+	Glu	TTC	[ENA]	○
	>W1610039706	AZRD01000067	Bacillota	Lactobacillus jensenii IM1 [AZRD]	230	303	+	Glu	TTC	[ENA]	○
	>W1610039712	AZRE01000001	Bacillota	Lactobacillus jensenii IM3 [AZRE]	230	303	+	Glu	TTC	[ENA]	○
	>W1610039750	AZRE01000045	Bacillota	Lactobacillus jensenii IM3 [AZRE]	4479	4550	+	Glu	TTC	[ENA]	○
	>W1610044130	BBAH01000096	Bacillota	Lacticaseibacillus manihotivorans DSM 13343 = JCM 12514 [BBAH]	1132	1205	+	Glu	TTC	[ENA]	○
	>W1610044145	BBAH01000181	Bacillota	Lacticaseibacillus manihotivorans DSM 13343 = JCM 12514 [BBAH]	190	262	+	Glu	TTC	[ENA]	○
	>W1610045827	BBBW01000019	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]	35705	35634	-	Glu	TTC	[ENA]	○
	>W1610045831	BBBW01000024	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]	27046	27119	+	Glu	TTC	[ENA]	○
	>W1610045856	BBBW01000059	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]	8	79	+	Glu	TTC	[ENA]	○
	>W1610502789	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	820743	820672	-	Glu	TTC	[ENA]	○
	>W1610502802	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	737206	737133	-	Glu	TTC	[ENA]	○
	>W1610502808	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	667250	667179	-	Glu	TTC	[ENA]	○
	>W1610502812	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	551933	551862	-	Glu	TTC	[ENA]	○
	>W1710031632	AZDU01000011	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]	36285	36214	-	Glu	TTC	[ENA]	○
	>W1710031637	AZDU01000026	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]	27113	27186	+	Glu	TTC	[ENA]	○
	>W1710031646	AZDU01000051	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]	325	396	+	Glu	TTC	[ENA]	○
	>W1710032850	AZEU01000237	Bacillota	Lacticaseibacillus manihotivorans DSM 13343 = JCM 12514 [AZEU]	242	314	+	Glu	TTC	[ENA]	○
	>W1710033159	AZFB01000001	Bacillota	Lactobacillus psittaci DSM 15354 [AZFB]	231	304	+	Glu	TTC	[ENA]	○
	>W1710034322	AZFX01000092	Bacillota	Lapidilactobacillus concavus DSM 17758 [AZFX]	781	854	+	Glu	TTC	[ENA]	○
	>W1710036607	AZNM01000002	Bacillota	Lactobacillus jensenii IM18-3 [AZNM]	1066	1139	+	Glu	TTC	[ENA]	○
	>W1710036621	AZNM01000027	Bacillota	Lactobacillus jensenii IM18-3 [AZNM]	259	188	-	Glu	TTC	[ENA]	○
	>W1710036647	AZNN01000008	Bacillota	Lactobacillus jensenii IM18-1 [AZNN]	4184	4255	+	Glu	TTC	[ENA]	○
	>W1710036683	AZNN01000088	Bacillota	Lactobacillus jensenii IM18-1 [AZNN]	1090	1163	+	Glu	TTC	[ENA]	○
	>W1710036695	AZNO01000002	Bacillota	Lactobacillus jensenii IM11 [AZNO]	10967	11040	+	Glu	TTC	[ENA]	○
	>W1710036766	AZRC01000010	Bacillota	Lactobacillus jensenii IM59 [AZRC]	40463	40390	-	Glu	TTC	[ENA]	○
	>W1710036790	AZRC01000026	Bacillota	Lactobacillus jensenii IM59 [AZRC]	5661	5732	+	Glu	TTC	[ENA]	○
	>W1710036819	AZRD01000012	Bacillota	Lactobacillus jensenii IM1 [AZRD]	4432	4503	+	Glu	TTC	[ENA]	○
	>W1710036851	AZRD01000067	Bacillota	Lactobacillus jensenii IM1 [AZRD]	230	303	+	Glu	TTC	[ENA]	○
	>W1710036857	AZRE01000001	Bacillota	Lactobacillus jensenii IM3 [AZRE]	230	303	+	Glu	TTC	[ENA]	○
	>W1710036895	AZRE01000045	Bacillota	Lactobacillus jensenii IM3 [AZRE]	4479	4550	+	Glu	TTC	[ENA]	○
	>W1710041290	BBAH01000096	Bacillota	Lacticaseibacillus manihotivorans DSM 13343 = JCM 12514 [BBAH]	1132	1205	+	Glu	TTC	[ENA]	○
	>W1710041305	BBAH01000181	Bacillota	Lacticaseibacillus manihotivorans DSM 13343 = JCM 12514 [BBAH]	190	262	+	Glu	TTC	[ENA]	○
	>W1710042668	BBBW01000019	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]	35705	35634	-	Glu	TTC	[ENA]	○
	>W1710042672	BBBW01000024	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]	27046	27119	+	Glu	TTC	[ENA]	○
	>W1710042697	BBBW01000059	Bacillota	Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]	8	79	+	Glu	TTC	[ENA]	○
	>W1710496188	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	820743	820672	-	Glu	TTC	[ENA]	○
	>W1710496201	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	737206	737133	-	Glu	TTC	[ENA]	○
	>W1710496207	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	667250	667179	-	Glu	TTC	[ENA]	○
	>W1710496211	FLLT01000006	Bacillota	Lactobacillus delbrueckii [FLLT]	551933	551862	-	Glu	TTC	[ENA]	○
	>W1710735989	LGIZ01000103	Bacillota	Loigolactobacillus backii [LGIZ]	2661	2588	-	Glu	TTC	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK