tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.658305 (74 seq.)
>W1710785733 LJIC01000114 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 6109 6183 + Val GAC [ENA] ¡û
>W1710892791 LNEC01000023 Alphaproteobacteria Bradyrhizobiaceae bacterium Ga0074131 [LNEC] 97996 98070 + Val GAC [ENA] ¡û
>W1711073378 LSIM01000140 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 33454 33380 - Val GAC [ENA] ¡û
>W1711073402 LSIN01000024 Alphaproteobacteria Bradyrhizobium sp. CCH10-C7 [LSIN] 3177 3251 + Val GAC [ENA] ¡û
>W1711501150 MKRG01000091 Alphaproteobacteria Afipia sp. 62-7 [MKRG] 39313 39239 - Val GAC [ENA] ¡û
>W1711783525 MVOD01000019 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 858054 857980 - Val GAC [ENA] ¡û
>C018835 CP000463 Alphaproteobacteria Rhodopseudomonas palustris [CP000463] 787043 787117 + Val GAC [Ensembl] ¡û
>C018884 CP000301 Alphaproteobacteria Rhodopseudomonas palustris [CP000301] 867054 867128 + Val GAC [Ensembl] ¡û
>C018944 CP000283 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [CP000283] 4820206 4820132 - Val GAC [Ensembl] ¡û
>C018981 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 1009620 1009694 + Val GAC [Ensembl] ¡û
>C019051 CP000250 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [CP000250] 5102690 5102616 - Val GAC [Ensembl] ¡û
>WENV180020154 FTCV01002552 [FTCV] metagenome; soil 2487 2413 - Val GAC [ENA] ¢þ
>W141007452 AGWX01000004 Alphaproteobacteria Afipia broomeae ATCC 49717 [AGWX] 1021879 1021805 - Val GAC [ENA] ¡û
>W141007497 AGWY01000011 Alphaproteobacteria Afipia clevelandensis ATCC 49720 [AGWY] 197018 196944 - Val GAC [ENA] ¡û
>WENV180304606 OBJI01171369 [OBJI] soil metagenome; soil 110 36 - Val GAC [ENA] ¢þ
>WENV180308593 OBJR01067656 [OBJR] soil metagenome; soil 242 316 + Val GAC [ENA] ¢þ
>WENV180344829 OBLL01233392 [OBLL] soil metagenome; soil 73 147 + Val GAC [ENA] ¢þ
>WENV180344974 OBLL01426175 [OBLL] soil metagenome; soil 114 188 + Val GAC [ENA] ¢þ
>WENV180397758 OBPZ01003804 [OBPZ] marine metagenome; ENVO:00002010 629 555 - Val GAC [ENA] ¢þ
>w001297 AAAF01000013 Alphaproteobacteria Rhodopseudomonas palustris [AAAF] 14138 14212 + Val GAC [ENA] ¡û
>W141063383 APHQ01000003 Alphaproteobacteria Afipia sp. OHSU_II-uncloned [APHQ] 132660 132734 + Val GAC [ENA] ¡û
>W141063714 APJE01000016 Alphaproteobacteria Afipia sp. OHSU_I-C6 [APJE] 132264 132190 - Val GAC [ENA] ¡û
>W141063757 APJF01000007 Alphaproteobacteria Afipia sp. OHSU_I-C4 [APJF] 132661 132735 + Val GAC [ENA] ¡û
>W141063782 APJG01000001 Alphaproteobacteria Afipia sp. OHSU_I-uncloned [APJG] 132661 132735 + Val GAC [ENA] ¡û
>W141063827 APJH01000001 Alphaproteobacteria Afipia sp. OHSU_II-C2 [APJH] 131228 131154 - Val GAC [ENA] ¡û
>W141063912 APJI01000023 Alphaproteobacteria Afipia sp. OHSU_II-C1 [APJI] 132396 132322 - Val GAC [ENA] ¡û
>W141093580 AVBK01000002 Alphaproteobacteria Afipia sp. NBIMC_P1-C1 [AVBK] 47439 47513 + Val GAC [ENA] ¡û
>W141093654 AVBL01000017 Alphaproteobacteria Afipia sp. NBIMC_P1-C2 [AVBL] 117793 117867 + Val GAC [ENA] ¡û
>W141093692 AVBM01000006 Alphaproteobacteria Afipia sp. NBIMC_P1-C3 [AVBM] 117793 117867 + Val GAC [ENA] ¡û
>WENV181168506 OEIU01411931 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 111 37 - Val GAC [ENA] ¢þ
>WENV181311921 OFJB01022896 [OFJB] sludge metagenome; sludge 559 633 + Val GAC [ENA] ¢þ
>W141194156 AYSU01000023 Alphaproteobacteria Rhodopseudomonas palustris JSC-3b [AYSU] 80166 80092 - Val GAC [ENA] ¡û
>W141223333 BADD01000724 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 2407 2333 - Val GAC [ENA] ¡û
>W141243584 CAJQ02000004 Alphaproteobacteria Afipia birgiae 34632 [CAJQ] 175830 175904 + Val GAC [ENA] ¡û
>WENV183736509 PJUC01007478 [PJUC] soil metagenome; Soil enriched on filter paper 82 156 + Val GAC [ENA] ¢þ
>WENV183745159 PJUL01003547 [PJUL] feces metagenome; Chicken feces enriched on filter paper 1235 1309 + Val GAC [ENA] ¢þ
>WENV170012361 APMI01160668 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 564 490 - Val GAC [ENA] ¢þ
>WENV170132244 CENT01051099 [CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 936 1010 + Val GAC [ENA] ¢þ
>WENV170706131 LNAP01001271 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 21213 21139 - Val GAC [ENA] ¢þ
>WENV170706520 LNAP01003850 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1124 1050 - Val GAC [ENA] ¢þ
>WENV170709581 LNFM01000487 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3923 3849 - Val GAC [ENA] ¢þ
>W09103825 AAKZ01000007 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [AAKZ] 60579 60505 - Val GAC [ENA] ¡û
>W09103880 AALA01000014 Alphaproteobacteria Rhodopseudomonas palustris BisA53 [AALA] 161954 161880 - Val GAC [ENA] ¡û
>W09104359 AALQ01000002 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [AALQ] 1274055 1273981 - Val GAC [ENA] ¡û
>W09104423 AALR01000010 Alphaproteobacteria Rhodopseudomonas palustris BisB18 [AALR] 113700 113626 - Val GAC [ENA] ¡û
>W09107603 ABJR01000004 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [ABJR] 546000 546074 + Val GAC [ENA] ¡û
>WENV170874213 MDTB01243362 [MDTB] marine metagenome; seawater 2158 2084 - Val GAC [ENA] ¢þ
>WENV170975151 MTKY01094387 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 156 82 - Val GAC [ENA] ¢þ
>C181041846 CP019966 Alphaproteobacteria Rhodopseudomonas palustris PS3 [CP019966] 1013879 1013953 + Val GAC - ¡û
>C181041894 CP019967 Alphaproteobacteria Rhodopseudomonas palustris YSC3 [CP019967] 1019364 1019438 + Val GAC - ¡û
>W141730496 JNIJ01000055 Alphaproteobacteria Bradyrhizobium sp. URHD0069 [JNIJ] 27419 27493 + Val GAC [ENA] ¡û
>W1910568903 JHAA01000016 Alphaproteobacteria Rhodopseudomonas palustris PSBS [JHAA] 52371 52445 + Val GAC [ENA] ¡û
>W1911219141 NRSI01000003 Alphaproteobacteria Rhodopseudomonas palustris DSM 126 [NRSI] 384875 384801 - Val GAC [ENA] ¡û
>W1911760581 QWVU01000047 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 30472 30546 + Val GAC [ENA] ¡û
>W1911809198 QYYC01000051 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 13413 13487 + Val GAC [ENA] ¡û
>W1911809241 QYYD01000031 Alphaproteobacteria Rhodopseudomonas palustris 2.1.18 [QYYD] 24386 24312 - Val GAC [ENA] ¡û
>W1810672325 QJTI01000021 Alphaproteobacteria Rhodopseudomonas faecalis JCM 11668 [QJTI] 16133 16207 + Val GAC [ENA] ¡û
>W1810679456 QKQS01000026 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 8387 8461 + Val GAC [ENA] ¡û
>W1810787512 QRDT01000013 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 12463 12537 + Val GAC [ENA] ¡û
>W1810884409 QUMP01000013 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 12463 12537 + Val GAC [ENA] ¡û
>SRA1023748 SRR035084.164361 454 Sequencing (SRP001805) 226 152 - Val GAC [SRA]
>W10112814 ADFI01000007 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 207255 207181 - Val GAC [ENA] ¡û
>C10110742 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 1042801 1042875 + Val GAC [Ensembl] ¡û
>W11116041 ADFI01000007 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 207255 207181 - Val GAC [ENA] ¡û
>C11118741 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 1140390 1140464 + Val GAC [Ensembl] ¡û
>W1511517257 JXXE01000235 Alphaproteobacteria Rhodopseudomonas palustris BAL398 [JXXE] 9445 9519 + Val GAC [ENA] ¡û
>W1511592000 LBIA01000001 Alphaproteobacteria Afipia massiliensis LC387 [LBIA] 1807527 1807453 - Val GAC [ENA] ¡û
>W1511625950 LCZM01000221 Alphaproteobacteria Rhodopseudomonas palustris 42OL [LCZM] 12044 12118 + Val GAC [ENA] ¡û
>W11168425 AFOF01000007 Alphaproteobacteria Bradyrhizobiaceae bacterium SG-6C [AFOF] 158552 158478 - Val GAC [ENA] ¡û
>W1610649539 LJIC01000114 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 6109 6183 + Val GAC [ENA] ¡û
>W1610753057 LNEC01000023 Alphaproteobacteria Bradyrhizobiaceae bacterium Ga0074131 [LNEC] 97996 98070 + Val GAC [ENA] ¡û
>W1610912683 LSIM01000140 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 33454 33380 - Val GAC [ENA] ¡û
>W1610912707 LSIN01000024 Alphaproteobacteria Bradyrhizobium sp. CCH10-C7 [LSIN] 3177 3251 + Val GAC [ENA] ¡û
>W1710548397 FODT01000001 Alphaproteobacteria Rhodopseudomonas pseudopalustris [FODT] 325192 325118 - Val GAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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