tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.667715 (53 seq.)
>W1710808915 LKDZ01000008 Betaproteobacteria Variovorax boronicumulans [LKDZ] 180270 180196 - Val CAC [ENA] ¡û
>W1710863084 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 985388 985462 + Val CAC [ENA] ¡û
>W1710882266 LMTS01000004 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 80444 80370 - Val CAC [ENA] ¡û
>W1711123818 LUJJ01000012 Betaproteobacteria Variovorax boronicumulans [LUJJ] 479783 479709 - Val CAC [ENA] ¡û
>W1711143364 LVHG01000054 Betaproteobacteria Variovorax paradoxus [LVHG] 14849 14775 - Val CAC [ENA] ¡û
>W1711259818 LYVO01000014 Betaproteobacteria Variovorax sp. KK3 [LYVO] 91581 91655 + Val CAC [ENA] ¡û
>W1711386521 MEFM01000059 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 261052 261126 + Val CAC [ENA] ¡û
>W1711387500 MEGR01000097 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 491320 491246 - Val CAC [ENA] ¡û
>W1711506609 MKWO01000014 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 261106 261180 + Val CAC [ENA] ¡û
>W1711581685 MNUL01000005 Betaproteobacteria Comamonadaceae bacterium CG1_02_60_18 [MNUL] 1205 1279 + Val CAC [ENA] ¡û
>W1711584011 MNXY01000005 Betaproteobacteria Comamonadaceae bacterium CG2_30_60_41 [MNXY] 4079 4005 - Val CAC [ENA] ¡û
>W1711721734 MTJN01000002 Betaproteobacteria Rhodoferax fermentans [MTJN] 502328 502254 - Val CAC [ENA] ¡û
>W131174644 ARIP01000070 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 111625 111551 - Val CAC [ENA] ¡û
>W131180363 ARNA01000050 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 839199 839125 - Val CAC [ENA] ¡û
>C018603 CP000267 Betaproteobacteria Rhodoferax ferrireducens T118 DSM 15236 [CP000267] 2381770 2381844 + Val CAC [Ensembl] ¡û
>w008226 AAJK01000018 Betaproteobacteria Rhodoferax ferrireducens DSM 15236 [AAJK] 78347 78276 - Val CAC [ENA] ¡û
>WENV180271390 OBEQ012269535 [OBEQ] groundwater metagenome; groundwater 145 219 + Val CAC [ENA] ¢þ
>WENV183731305 PJTS01035208 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 218 144 - Val CAC [ENA] ¢þ
>WENV183735296 PJUA01009362 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 611 537 - Val CAC [ENA] ¢þ
>WENV183735619 PJUB01000219 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 21235 21309 + Val CAC [ENA] ¢þ
>WENV183736328 PJUC01000772 [PJUC] soil metagenome; Soil enriched on filter paper 2466 2540 + Val CAC [ENA] ¢þ
>WENV183741388 PJUG01000002 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 105067 105141 + Val CAC [ENA] ¢þ
>WENV183741900 PJUH01000003 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 709007 708933 - Val CAC [ENA] ¢þ
>WENV170556975 CXWL01017005 [CXWL] groundwater metagenome; biofilm material 12227 12301 + Val CAC [ENA] ¢þ
>WENV170639662 JFJP01005704 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 13786 13860 + Val CAC [ENA] ¢þ
>W09119939 ACEE01000036 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 16146 16072 - Val CAC [ENA] ¡û
>WENV170961858 MLJW01002873 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 1710 1636 - Val CAC [ENA] ¢þ
>C181078493 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 4389883 4389809 - Val CAC - ¡û
>C181159368 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 633134 633208 + Val CAC - ¡û
>C141002546 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 2458514 2458588 + Val CAC [Ensembl] ¡û
>W1910744107 MHZY01000166 Betaproteobacteria Rhodoferax sp. RIFCSPLOWO2_12_FULL_60_11 [MHZY] 6869 6943 + Val CAC [ENA] ¡û
>W1910792812 MRCN01000002 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 394788 394862 + Val CAC [ENA] ¡û
>C09111095 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 2293751 2293825 + Val CAC [Ensembl] ¡û
>W1911775306 QXMN01000002 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 299578 299504 - Val CAC [ENA] ¡û
>W1810046168 NNBQ01000002 Betaproteobacteria Variovorax sp. B4 [NNBQ] 768125 768199 + Val CAC [ENA] ¡û
>W1810046265 NNBR01000002 Betaproteobacteria Variovorax sp. B2 [NNBR] 768137 768211 + Val CAC [ENA] ¡û
>W1511555000 JZWI01000014 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 148165 148091 - Val CAC [ENA] ¡û
>W1610047761 BBDP01001046 Betaproteobacteria Variovorax sp. RA8 [BBDP] 1214 1288 + Val CAC [ENA] ¡û
>W1610072149 BCUS01000022 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 45307 45381 + Val CAC [ENA] ¡û
>W1610072197 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 351822 351748 - Val CAC [ENA] ¡û
>W1610725430 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 985388 985462 + Val CAC [ENA] ¡û
>W1610744192 LMTS01000004 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 80444 80370 - Val CAC [ENA] ¡û
>W1610954372 LVHG01000054 Betaproteobacteria Variovorax paradoxus [LVHG] 14849 14775 - Val CAC [ENA] ¡û
>W1710044271 BBDP01001046 Betaproteobacteria Variovorax sp. RA8 [BBDP] 1214 1288 + Val CAC [ENA] ¡û
>W1710069351 BCUS01000022 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 45307 45381 + Val CAC [ENA] ¡û
>W1710069399 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 351822 351748 - Val CAC [ENA] ¡û
>W1710506173 FMUJ01000001 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 1185685 1185759 + Val CAC [ENA] ¡û
>W1710512946 FMZU01000011 Betaproteobacteria Variovorax sp. CF079 [FMZU] 178319 178245 - Val CAC [ENA] ¡û
>W1710538151 FNUI01000009 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 142775 142701 - Val CAC [ENA] ¡û
>W1710539569 FNVM01000009 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 217789 217863 + Val CAC [ENA] ¡û
>W1710545302 FOBJ01000008 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 117826 117752 - Val CAC [ENA] ¡û
>W1710557154 FOKS01000009 Betaproteobacteria Variovorax sp. NFACC26 [FOKS] 217781 217855 + Val CAC [ENA] ¡û
>W1710562261 FOOV01000006 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 217790 217864 + Val CAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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