tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.671670 (116 seq.)
>W1710991266 LPXO01000001 Alphaproteobacteria Pseudoponticoccus marisrubri SJ5A-1 [LPXO] 182675 182601 - Val CAC [ENA] ¡û
>W1710996678 LQBQ01000001 Alphaproteobacteria Ruegeria marisrubri ZGT118 [LQBQ] 455787 455713 - Val CAC [ENA] ¡û
>W1711126397 LUOO01000003 Alphaproteobacteria Maritimibacter sp. REDSEA-S28_B5 [LUOO] 94561 94635 + Val CAC [ENA] ¡û
>W1711126435 LUOP01000001 Alphaproteobacteria Maritimibacter sp. REDSEA-S40_B3 [LUOP] 593092 593166 + Val CAC [ENA] ¡û
>W1711175851 LWFA01001664 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 21404 21478 + Val CAC [ENA] ¡û
>W1711229302 LXYH01000056 Alphaproteobacteria Rhodobacteraceae bacterium EhC02 [LXYH] 19556 19482 - Val CAC [ENA] ¡û
>W1711229666 LXYQ01000101 Alphaproteobacteria Roseovarius indicus [LXYQ] 91625 91699 + Val CAC [ENA] ¡û
>W1711572449 MNBW01000012 Alphaproteobacteria Nioella nitratireducens [MNBW] 93033 93107 + Val CAC [ENA] ¡û
>W1711709203 MSYP01000001 Alphaproteobacteria Rhodovulum sulfidophilum [MSYP] 3610255 3610181 - Val CAC [ENA] ¡û
>W1711709283 MSYR01000001 Alphaproteobacteria Rhodovulum sulfidophilum [MSYR] 2721902 2721828 - Val CAC [ENA] ¡û
>W1711712882 MTCO01000334 Alphaproteobacteria Brevirhabdus pacifica [MTCO] 287 361 + Val CAC [ENA] ¡û
>WENV011448 AACY020311138 Marine microbial communities from Global Ocean Sampling (GOS) 1803 1729 - Val CAC [ENA]
>C171064535 CP017622 Alphaproteobacteria Ketogulonicigenium vulgare SPU B805 [CP017622] 1649039 1649113 + Val CAC - ¡û
>C171092091 CP019312 Alphaproteobacteria Tateyamaria omphalii DOK1-4 [CP019312] 1150542 1150616 + Val CAC - ¡û
>C171105921 CP020384 Alphaproteobacteria Rhodovulum sp. MB263 [CP020384] 3355870 3355796 - Val CAC - ¡û
>W131222999 AUBS01000004 Alphaproteobacteria Pseudodonghicola xiamenensis DSM 18339 [AUBS] 95361 95435 + Val CAC [ENA] ¡û
>W131241997 BASI01000001 Alphaproteobacteria Rhodovulum sulfidophilum DSM 1374 [BASI] 1355300 1355374 + Val CAC [ENA] ¡û
>w028000 ABCR01000003 Alphaproteobacteria Roseobacter sp. AzwK-3b [ABCR] 57111 57040 - Val CAC [ENA] ¡û
>w020880 AAVE01000012 Alphaproteobacteria Dinoroseobacter shibae DFL 12 [AAVE] 43143 43072 - Val CAC [ENA] ¡û
>w012546 AAMO01000012 Alphaproteobacteria Pseudooceanicola batsensis HTCC2597 [AAMO] 119372 119301 - Val CAC [ENA] ¡û
>w011967 AALY01000002 Alphaproteobacteria Roseovarius nubinhibens ISM [AALY] 848035 847964 - Val CAC [ENA] ¡û
>WENV180014087 FPIC01049648 [FPIC] soil metagenome; Soil 3193 3119 - Val CAC [ENA] ¢þ
>WENV181162875 OEIO01028735 [OEIO] marine metagenome; sea ice 220 294 + Val CAC [ENA] ¢þ
>W141199864 AYXI01000212 Alphaproteobacteria Defluviimonas sp. 20V17 [AYXI] 10856 10782 - Val CAC [ENA] ¡û
>C08004199 CP000830 Alphaproteobacteria Dinoroseobacter shibae DFL 12 = DSM 16493 [CP000830] 1844033 1843962 - Val CAC [Ensembl] ¡û
>W141278725 JAFT01000005 Alphaproteobacteria Oceanicola sp. HL-35 [JAFT] 3489671 3489597 - Val CAC [ENA] ¡û
>WENV183705375 PDWI01001458 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 29042 28968 - Val CAC [ENA] ¢þ
>WENV183719446 PDWJ01014300 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 17 91 + Val CAC [ENA] ¢þ
>WENV170016004 AZIJ01007460 [AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max 2815 2741 - Val CAC [ENA] ¢þ
>WENV170152195 CEOE01050561 [CEOE] marine metagenome genome assembly TARA_025_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 283 209 - Val CAC [ENA] ¢þ
>WENV170229376 CEQG01112498 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 272 198 - Val CAC [ENA] ¢þ
>WENV170269009 CERH01022441 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1669 1595 - Val CAC [ENA] ¢þ
>WENV170469878 CEVF01147672 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10461 10387 - Val CAC [ENA] ¢þ
>WENV170550845 CXWF01036839 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 40722 40796 + Val CAC [ENA] ¢þ
>WENV170634419 FYBJ01001209 [FYBJ] marine metagenome; marine 1750 1824 + Val CAC [ENA] ¢þ
>WENV170634470 FYBJ01001417 [FYBJ] marine metagenome; marine 30429 30355 - Val CAC [ENA] ¢þ
>WENV170727334 LULE01000002 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 519196 519270 + Val CAC [ENA] ¢þ
>WENV170729178 LULF01012660 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 1175 1249 + Val CAC [ENA] ¢þ
>WENV170735718 LULL01009148 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 445 371 - Val CAC [ENA] ¢þ
>WENV170739272 LULQ01000080 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 1378 1304 - Val CAC [ENA] ¢þ
>WENV170744183 LULW01034238 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 239 313 + Val CAC [ENA] ¢þ
>WENV170762233 LUMW01002683 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 1973 1899 - Val CAC [ENA] ¢þ
>WENV170803780 MDSW01035568 [MDSW] marine metagenome; seawater 3590 3516 - Val CAC [ENA] ¢þ
>WENV170901582 MDTD01172558 [MDTD] marine metagenome; seawater 33862 33936 + Val CAC [ENA] ¢þ
>WENV170938938 MDTG01317370 [MDTG] marine metagenome; seawater 2445 2371 - Val CAC [ENA] ¢þ
>WENV170944581 MDTG01417674 [MDTG] marine metagenome; seawater 1281 1207 - Val CAC [ENA] ¢þ
>WENV170963441 MRWG01000188 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 33249 33175 - Val CAC [ENA] ¢þ
>W09132565 ACNX01000016 Alphaproteobacteria Ruegeria lacuscaerulensis ITI-1157 [ACNX] 58188 58262 + Val CAC [ENA] ¡û
>C191020019 CP022303 Alphaproteobacteria Thalassococcus sp. S3 [CP022303] 1898709 1898783 + Val CAC - ¡û
>W1910442919 FWFQ01000001 Alphaproteobacteria Pseudoruegeria aquimaris CECT 7680 [FWFQ] 173502 173428 - Val CAC [ENA] ¡û
>W1910443102 FWFU01000001 Alphaproteobacteria Roseovarius halotolerans CECT 8110 [FWFU] 994219 994293 + Val CAC [ENA] ¡û
>W1910808404 MUAV01000020 Alphaproteobacteria Rhodovulum viride JA756 [MUAV] 48747 48673 - Val CAC [ENA] ¡û
>W1911492678 OBEA01000005 Alphaproteobacteria Pseudooceanicola antarcticus CGMCC 1.12662 [OBEA] 139468 139394 - Val CAC [ENA] ¡û
>W1911495042 OBMN01000008 Alphaproteobacteria Phaeovulum vinaykumarii JA123 [OBMN] 12677 12751 + Val CAC [ENA] ¡û
>W1911638535 PVWS01000016 Alphaproteobacteria Roseovarius sp. A46 [PVWS] 45319 45245 - Val CAC [ENA] ¡û
>W1911653476 QDFI01000045 Alphaproteobacteria Phycocomes zhengii LMIT002 [QDFI] 4675 4601 - Val CAC [ENA] ¡û
>W1810061269 PDNI01000058 Alphaproteobacteria Roseovarius nitratireducens TFZ [PDNI] 305539 305613 + Val CAC [ENA] ¡û
>W1810090266 PGFI01000012 Alphaproteobacteria Brevirhabdus pacifica DSM 27767 [PGFI] 68608 68534 - Val CAC [ENA] ¡û
>W1810101751 PGTD01000015 Alphaproteobacteria Pseudooceanicola antarcticus Ar-45 [PGTD] 273249 273323 + Val CAC [ENA] ¡û
>W1810120358 PHSN01000025 Alphaproteobacteria Acidimangrovimonas sediminis MS2-2 [PHSN] 28228 28154 - Val CAC [ENA] ¡û
>W1810364784 PVTN01000002 Alphaproteobacteria Marivita geojedonensis DSM 29432 [PVTN] 93520 93446 - Val CAC [ENA] ¡û
>W1810486749 QAYC01000003 Alphaproteobacteria Rhodovulum kholense DSM 19783 [QAYC] 331878 331952 + Val CAC [ENA] ¡û
>W1810504531 QBKZ01000023 Alphaproteobacteria Mangrovicoccus ximenensis T1lg56 [QBKZ] 67010 67084 + Val CAC [ENA] ¡û
>W1810580433 QETF01000002 Alphaproteobacteria Salibaculum griseiflavum WDS4C29 [QETF] 118084 118010 - Val CAC [ENA] ¡û
>W1810603213 QGKU01000021 Alphaproteobacteria Meridianimarinicoccus roseus TG-679 [QGKU] 38782 38708 - Val CAC [ENA] ¡û
>W1810762267 QPMK01000003 Alphaproteobacteria Thalassococcus profundi WRAS1 [QPMK] 461287 461361 + Val CAC [ENA] ¡û
>C151006771 CP004393 Alphaproteobacteria Celeribacter indicus P73 [CP004393] 2938534 2938460 - Val CAC [Ensembl] ¡û
>W1510000326 AQQZ01000007 Alphaproteobacteria Pseudaestuariivita atlantica 22II-S11-z3 [AQQZ] 169271 169345 + Val CAC [ENA] ¡û
>C11111803 CP002018 Alphaproteobacteria Ketogulonicigenium vulgare WSH-001 [CP002018] 1104595 1104669 + Val CAC [Ensembl] ¡û
>C11111869 CP002224 Alphaproteobacteria Ketogulonicigenium vulgare Y25 [CP002224] 1511107 1511181 + Val CAC [Ensembl] ¡û
>W1511325025 JQFU01000021 Alphaproteobacteria Rhodovulum sp. NI22 [JQFU] 31416 31342 - Val CAC [ENA] ¡û
>W1511483010 JWLL01000006 Alphaproteobacteria Tateyamaria sp. ANG-S1 [JWLL] 836882 836808 - Val CAC [ENA] ¡û
>WENV044587 AACY022434999 Marine microbial communities from Global Ocean Sampling (GOS) 519 593 + Val CAC [ENA]
>W1511518791 JXYH01000042 Alphaproteobacteria Aestuariivita boseongensis BS-B2 [JXYH] 13151 13225 + Val CAC [ENA] ¡û
>C161001437 AP014800 Alphaproteobacteria Rhodovulum sulfidophilum DSM 2351 [AP014800] 404570 404644 + Val CAC [Ensembl] ¡û
>C161029336 CP010869 Alphaproteobacteria Actibacterium sp. EMB200-NS6 [CP010869] 2265561 2265487 - Val CAC [Ensembl] ¡û
>C161047260 CP012908 Alphaproteobacteria Ketogulonicigenium vulgare Hbe602 [CP012908] 1494976 1495050 + Val CAC - ¡û
>C161087715 CP015418 Alphaproteobacteria Rhodovulum sulfidophilum DSM 1374 [CP015418] 1357782 1357856 + Val CAC - ¡û
>C161087764 CP015421 Alphaproteobacteria Rhodovulum sulfidophilum SNK001 [CP015421] 1321903 1321977 + Val CAC [Ensembl] ¡û
>C161099987 CP016592 Alphaproteobacteria Ketogulonicigenium vulgare SKV [CP016592] 1494788 1494862 + Val CAC - ¡û
>W1610018444 AQQX01000003 Alphaproteobacteria Pseudooceanicola atlanticus [AQQX] 158270 158196 - Val CAC [ENA] ¡û
>W1610578304 LAXI01000015 Alphaproteobacteria Roseovarius indicus [LAXI] 14914 14840 - Val CAC [ENA] ¡û
>WENV075643 AACY024046482 Marine microbial communities from Global Ocean Sampling (GOS) 174 248 + Val CAC [ENA]
>W1610845938 LPXO01000001 Alphaproteobacteria Pseudoponticoccus marisrubri SJ5A-1 [LPXO] 182675 182601 - Val CAC [ENA] ¡û
>W1610851335 LQBQ01000001 Alphaproteobacteria Ruegeria marisrubri ZGT118 [LQBQ] 455787 455713 - Val CAC [ENA] ¡û
>W1610937330 LUOO01000003 Alphaproteobacteria Maritimibacter sp. REDSEA-S28_B5 [LUOO] 94561 94635 + Val CAC [ENA] ¡û
>W1610937368 LUOP01000001 Alphaproteobacteria Maritimibacter sp. REDSEA-S40_B3 [LUOP] 593092 593166 + Val CAC [ENA] ¡û
>W1610984164 LWFA01001664 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 21404 21478 + Val CAC [ENA] ¡û
>W1611013172 LXYH01000056 Alphaproteobacteria Rhodobacteraceae bacterium EhC02 [LXYH] 19556 19482 - Val CAC [ENA] ¡û
>W1611013536 LXYQ01000101 Alphaproteobacteria Roseovarius indicus [LXYQ] 91625 91699 + Val CAC [ENA] ¡û
>W1710015436 AQQR01000003 Alphaproteobacteria Marinibacterium profundimaris [AQQR] 367137 367063 - Val CAC [ENA] ¡û
>W1710015534 AQQT01000002 Alphaproteobacteria Loktanella sp. 22II-4b [AQQT] 68532 68458 - Val CAC [ENA] ¡û
>W1710015660 AQQX01000003 Alphaproteobacteria Pseudooceanicola atlanticus [AQQX] 158270 158196 - Val CAC [ENA] ¡û
>W1710083048 BDIY01000006 Alphaproteobacteria Roseovarius sp. A-2 [BDIY] 86370 86444 + Val CAC [ENA] ¡û
>W1710514205 FNAT01000005 Alphaproteobacteria Limimaricola pyoseonensis [FNAT] 172199 172125 - Val CAC [ENA] ¡û
>W1710518491 FNEB01000001 Alphaproteobacteria Lutimaribacter saemankumensis [FNEB] 307172 307246 + Val CAC [ENA] ¡û
>W1710518959 FNEJ01000003 Alphaproteobacteria Salipiger marinus marina [FNEJ] 782 708 - Val CAC [ENA] ¡û
>W1710524227 FNIO01000002 Alphaproteobacteria Lutimaribacter pacificus [FNIO] 535830 535904 + Val CAC [ENA] ¡û
>W1710529300 FNNW01000001 Alphaproteobacteria Celeribacter indicus [FNNW] 481943 481869 - Val CAC [ENA] ¡û
>W1710529555 FNOB01000011 Alphaproteobacteria Allgaiera indica [FNOB] 17245 17171 - Val CAC [ENA] ¡û
>W1710542588 FNZG01000003 Alphaproteobacteria Pseudooceanicola nitratireducens [FNZG] 76404 76330 - Val CAC [ENA] ¡û
>W1710543729 FOAG01000003 Alphaproteobacteria Roseovarius azorensis [FOAG] 187404 187330 - Val CAC [ENA] ¡û
>W1710545547 FOBO01000026 Alphaproteobacteria Roseovarius tolerans [FOBO] 5231 5157 - Val CAC [ENA] ¡û
>W1710558449 FOLX01000001 Alphaproteobacteria Pseudooceanicola nitratireducens [FOLX] 1760612 1760686 + Val CAC [ENA] ¡û
>W1710559833 FOMY01000001 Alphaproteobacteria Roseovarius indicus [FOMY] 129427 129501 + Val CAC [ENA] ¡û
>W1710574581 FOYI01000015 Alphaproteobacteria Poseidonocella sedimentorum [FOYI] 35821 35895 + Val CAC [ENA] ¡û
>W1710584237 FQVK01000006 Alphaproteobacteria Ruegeria intermedia [FQVK] 107908 107982 + Val CAC [ENA] ¡û
>W1710586321 FQXC01000002 Alphaproteobacteria Marivita hallyeonensis [FQXC] 358409 358335 - Val CAC [ENA] ¡û
>W1710587281 FQYJ01000001 Alphaproteobacteria Ruegeria lacuscaerulensis ITI-1157 [FQYJ] 749125 749051 - Val CAC [ENA] ¡û
>W1710589251 FQZZ01000005 Alphaproteobacteria Lutimaribacter pacificus [FQZZ] 249054 249128 + Val CAC [ENA] ¡û
>W1710591379 FRBR01000001 Alphaproteobacteria Roseovarius pacificus [FRBR] 186249 186175 - Val CAC [ENA] ¡û
>W1710591910 FRCB01000007 Alphaproteobacteria Roseovarius litoreus [FRCB] 193598 193672 + Val CAC [ENA] ¡û
>W1710599154 FTOM01000008 Alphaproteobacteria Phaeovulum vinaykumarii [FTOM] 133891 133817 - Val CAC [ENA] ¡û
>W1710599318 FTOQ01000002 Alphaproteobacteria Roseivivax lentus [FTOQ] 571126 571200 + Val CAC [ENA] ¡û
>W1710616680 JFKC01000003 Alphaproteobacteria Marivita geojedonensis [JFKC] 225029 225103 + Val CAC [ENA] ¡û
>W1710697177 LAXI01000015 Alphaproteobacteria Roseovarius indicus [LAXI] 14914 14840 - Val CAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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