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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.6904 (234 seq.)
>W1710778523
LJCZ01000087
Bacillota
Lactobacillus crispatus [LJCZ]
1208
1300
+
Ser
GCT
[ENA]
¡û
>W1710778568
LJDA01000171
Bacillota
Lactobacillus crispatus [LJDA]
634
726
+
Ser
GCT
[ENA]
¡û
>W1710792509
LJOK01000191
Bacillota
Lactobacillus crispatus [LJOK]
1240
1148
-
Ser
GCT
[ENA]
¡û
>W1710792617
LJOM01000137
Bacillota
Lactobacillus crispatus [LJOM]
5322
5230
-
Ser
GCT
[ENA]
¡û
>W1710792677
LJON01000117
Bacillota
Lactobacillus crispatus [LJON]
1324
1416
+
Ser
GCT
[ENA]
¡û
>W1711080484
LSQY01000189
Bacillota
Lactobacillus crispatus [LSQY]
982
890
-
Ser
GCT
[ENA]
¡û
>W1711083890
LSVI01000048
Bacillota
Lactobacillus helveticus [LSVI]
1391
1482
+
Ser
GCT
[ENA]
¡û
>W1711083971
LSVJ01000142
Bacillota
Lactobacillus helveticus [LSVJ]
1391
1482
+
Ser
GCT
[ENA]
¡û
>W1711092329
LTDX01000092
Bacillota
Lactobacillus acetotolerans [LTDX]
677
586
-
Ser
GCT
[ENA]
¡û
>W1711304392
MAKH01000002
Bacillota
Lactobacillus crispatus [MAKH]
2338
2247
-
Ser
GCT
[ENA]
¡û
>W1711305409
MAMR01000291
Bacillota
Lactobacillus crispatus [MAMR]
568
477
-
Ser
GCT
[ENA]
¡û
>W1711344576
MCJG01000012
Bacillota
Lactobacillus crispatus [MCJG]
2032
2124
+
Ser
GCT
[ENA]
¡û
>W131252202
CBLR010000006
Bacillota
Lactobacillus acidophilus CIRM-BIA 445 [CBLR]
77
168
+
Ser
GCT
[ENA]
¡û
>W131252250
CBLS010000003
Bacillota
Lactobacillus acidophilus DSM 9126 [CBLS]
1362
1453
+
Ser
GCT
[ENA]
¡û
>W131252298
CBLT010000002
Bacillota
Lactobacillus acidophilus DSM 20242 [CBLT]
1290
1381
+
Ser
GCT
[ENA]
¡û
>W1711577150
MNPO01000002
Bacillota
Lactobacillus acidophilus [MNPO]
359366
359457
+
Ser
GCT
[ENA]
¡û
>W1711577174
MNPO01000003
Bacillota
Lactobacillus acidophilus [MNPO]
3931
3840
-
Ser
GCT
[ENA]
¡û
>W1711632591
MPSU01000082
Bacillota
Lactobacillus helveticus [MPSU]
1379
1470
+
Ser
GCT
[ENA]
¡û
>W1712042429
NFLS01000063
Bacillota
Lactobacillus gallinarum [NFLS]
291
382
+
Ser
GCT
[ENA]
¡û
>W1712042822
NFLZ01000064
Bacillota
Lactobacillus gallinarum [NFLZ]
1098
1007
-
Ser
GCT
[ENA]
¡û
>C171051867
CP016827
Bacillota
Lactobacillus helveticus D76 [CP016827]
997452
997361
-
Ser
GCT
-
¡û
>C171102951
CP020029
Bacillota
Lactobacillus helveticus D75 [CP020029]
1617338
1617247
-
Ser
GCT
-
¡û
>W141007975
AGZF01000044
Bacillota
Lactobacillus crispatus FB049-03 [AGZF]
1399
1491
+
Ser
GCT
[ENA]
¡û
>WENV180340035
OBLI01012528
[OBLI] pig gut metagenome; faeces
4236
4145
-
Ser
GCT
[ENA]
¢þ
>WENV180717246
ODGC01000015
[ODGC] human metagenome; G_DNA_Vaginal introitus
7442
7351
-
Ser
GCT
[ENA]
¢þ
>WENV180717363
ODGD01000064
[ODGD] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV180718764
ODGH01000071
[ODGH] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV180735490
ODHA01000060
[ODHA] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV180748638
ODHO01000016
[ODHO] human metagenome; G_DNA_Posterior fornix
226
317
+
Ser
GCT
[ENA]
¢þ
>WENV180875495
ODLR01000527
[ODLR] human metagenome; G_DNA_Posterior fornix
55
145
+
Ser
GCT
[ENA]
¢þ
>WENV180887118
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV180914377
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
10717
10627
-
Ser
GCT
[ENA]
¢þ
>WENV180943090
ODUB01000058
[ODUB] human metagenome; G_DNA_Posterior fornix
1359
1449
+
Ser
GCT
[ENA]
¢þ
>WENV181009944
ODWF01000067
[ODWF] human metagenome; G_DNA_Posterior fornix
10643
10552
-
Ser
GCT
[ENA]
¢þ
>WENV181052414
ODYF01000064
[ODYF] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV181057210
ODYK01000333
[ODYK] human metagenome; G_DNA_Posterior fornix
1368
1278
-
Ser
GCT
[ENA]
¢þ
>WENV181124435
OEFS01000060
[OEFS] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV181200702
OERL01003017
[OERL] metagenome; Caecal content
57
147
+
Ser
GCT
[ENA]
¢þ
>WENV181204818
OERZ01029271
[OERZ] metagenome; Caecal content
55
145
+
Ser
GCT
[ENA]
¢þ
>W141154831
AXLM01000041
Bacillota
Lactobacillus crispatus EM-LC1 [AXLM]
917
825
-
Ser
GCT
[ENA]
¡û
>WENV181891276
OGXO01011516
[OGXO] human gut metagenome; faeces
74
165
+
Ser
GCT
[ENA]
¢þ
>W141227527
BALB01000064
Bacillota
Lactobacillus gallinarum JCM 2011 [BALB]
1017
926
-
Ser
GCT
[ENA]
¡û
>W141228137
BALR01000022
Bacillota
Lactobacillus acidophilus JCM 1132 [BALR]
170
261
+
Ser
GCT
[ENA]
¡û
>W141228283
BALU01000020
Bacillota
Lactobacillus kitasatonis JCM 1039 [BALU]
1300
1391
+
Ser
GCT
[ENA]
¡û
>W141244239
CAKE01000031
Bacillota
Lactobacillus hominis CRBIP 24.179 [CAKE]
258
349
+
Ser
GCT
[ENA]
¡û
>C08006111
CP000517
Bacillota
Lactobacillus helveticus DPC 4571 [CP000517]
457089
457180
+
Ser
GCT
[Ensembl]
¡û
>W141255563
CBUK010000121
Bacillota
Lactobacillus helveticus CIRM-BIA 951 [CBUK]
10994
10903
-
Ser
GCT
[ENA]
¡û
>W141255630
CBUL010000158
Bacillota
Lactobacillus helveticus CIRM-BIA 104 [CBUL]
765
856
+
Ser
GCT
[ENA]
¡û
>W141255689
CBUM010000178
Bacillota
Lactobacillus helveticus CIRM-BIA 103 [CBUM]
760
669
-
Ser
GCT
[ENA]
¡û
>WENV182821888
OKBA01008734
[OKBA] human gut metagenome; human gut
54
145
+
Ser
GCT
[ENA]
¢þ
>WENV182890375
OKSF01026233
[OKSF] human gut metagenome; faeces
1005
915
-
Ser
GCT
[ENA]
¢þ
>WENV183204889
OLPZ01001035
[OLPZ] human gut metagenome; faeces
1358
1449
+
Ser
GCT
[ENA]
¢þ
>WENV183238139
OLQY01006361
[OLQY] human gut metagenome; faeces
3855
3764
-
Ser
GCT
[ENA]
¢þ
>WENV183264378
OLRR01016519
[OLRR] human gut metagenome; faeces
1278
1369
+
Ser
GCT
[ENA]
¢þ
>WENV183291685
OLSI01007011
[OLSI] human gut metagenome; faeces
1950
1859
-
Ser
GCT
[ENA]
¢þ
>WENV183548246
OOAW01002670
[OOAW] human gut metagenome; human gut
328
419
+
Ser
GCT
[ENA]
¢þ
>WENV183606602
OODN01019822
[OODN] human gut metagenome; human gut
590
681
+
Ser
GCT
[ENA]
¢þ
>WENV183771870
PPYF01000649
[PPYF] human gut metagenome; stool from patient with Crohn's disease
14203
14112
-
Ser
GCT
[ENA]
¢þ
>WENV183772667
PPYF01018294
[PPYF] human gut metagenome; stool from patient with Crohn's disease
73
164
+
Ser
GCT
[ENA]
¢þ
>WENV170638352
JFBN01463812
[JFBN] chicken gut metagenome; ceca of Broiler chicken
793
701
-
Ser
GCT
[ENA]
¢þ
>C181017308
CP015444
Bacillota
Lactobacillus helveticus FAM8627 [CP015444]
1397196
1397105
-
Ser
GCT
-
¡û
>C181017446
CP015496
Bacillota
Lactobacillus helveticus FAM8105 [CP015496]
449926
450017
+
Ser
GCT
-
¡û
>C181017508
CP015498
Bacillota
Lactobacillus helveticus FAM22155 [CP015498]
480922
481013
+
Ser
GCT
-
¡û
>C181027682
CP017706
Bacillota
Lactobacillus amylovorus DSM 20531 [CP017706]
674782
674691
-
Ser
GCT
-
¡û
>C181045420
CP020620
Bacillota
Lactobacillus acidophilus DSM 20079 [CP020620]
74793
74884
+
Ser
GCT
-
¡û
>C181178875
CP029476
Bacillota
Lactobacillus apis ESL0185 [CP029476]
359543
359634
+
Ser
GCT
-
¡û
>C181178930
CP029477
Bacillota
Lactobacillus kullabergensis ESL0186 [CP029477]
470521
470611
+
Ser
GCT
-
¡û
>C181179878
CP029544
Bacillota
Lactobacillus helsingborgensis ESL0183 [CP029544]
477831
477921
+
Ser
GCT
-
¡û
>C191014825
CP017982
Bacillota
Lactobacillus helveticus LH99 [CP017982]
423802
423893
+
Ser
GCT
-
¡û
>C191016290
CP019581
Bacillota
Lactobacillus helveticus LH5 [CP019581]
1944226
1944317
+
Ser
GCT
-
¡û
>C191044590
CP026503
Bacillota
Lactobacillus crispatus AB70 [CP026503]
479206
479296
+
Ser
GCT
-
¡û
>C191073261
CP031016
Bacillota
Lactobacillus helveticus [CP031016]
478395
478486
+
Ser
GCT
-
¡û
>C191073329
CP031018
Bacillota
Lactobacillus helveticus [CP031018]
480963
481054
+
Ser
GCT
-
¡û
>C191105854
CP033426
Bacillota
Lactobacillus crispatus CO3MRSI1 [CP033426]
1235889
1235979
+
Ser
GCT
-
¡û
>C191138831
CP035307
Bacillota
Lactobacillus helveticus IDCC3801 [CP035307]
1529074
1528983
-
Ser
GCT
-
¡û
>W09123247
ACGU01000104
Bacillota
Lactobacillus ultunensis DSM 16047 [ACGU]
3994
3903
-
Ser
GCT
[ENA]
¡û
>W1910652771
LYQU01000003
Bacillota
Lactobacillus crispatus UMNLC4 [LYQU]
1324
1414
+
Ser
GCT
[ENA]
¡û
>W1910652851
LYQV01000035
Bacillota
Lactobacillus crispatus UMNLC5 [LYQV]
10924
10834
-
Ser
GCT
[ENA]
¡û
>W1910652897
LYQW01000031
Bacillota
Lactobacillus crispatus UMNLC6 [LYQW]
10721
10631
-
Ser
GCT
[ENA]
¡û
>W1910652970
LYQX01000049
Bacillota
Lactobacillus crispatus UMNLC7 [LYQX]
1324
1414
+
Ser
GCT
[ENA]
¡û
>W1910653018
LYQY01000043
Bacillota
Lactobacillus crispatus UMNLC8 [LYQY]
10904
10814
-
Ser
GCT
[ENA]
¡û
>W1910653172
LYRB01000004
Bacillota
Lactobacillus crispatus UMNLC11 [LYRB]
1324
1414
+
Ser
GCT
[ENA]
¡û
>W1910653243
LYRC01000027
Bacillota
Lactobacillus crispatus UMNLC12 [LYRC]
1499
1589
+
Ser
GCT
[ENA]
¡û
>W1910653358
LYRE01000053
Bacillota
Lactobacillus crispatus UMNLC14 [LYRE]
10750
10660
-
Ser
GCT
[ENA]
¡û
>W1910653408
LYRF01000042
Bacillota
Lactobacillus crispatus UMNLC15 [LYRF]
1324
1414
+
Ser
GCT
[ENA]
¡û
>W1910653481
LYRG01000028
Bacillota
Lactobacillus crispatus UMNLC16 [LYRG]
10721
10631
-
Ser
GCT
[ENA]
¡û
>W1910653572
LYRI01000012
Bacillota
Lactobacillus crispatus UMNLC19 [LYRI]
10753
10663
-
Ser
GCT
[ENA]
¡û
>W1910653659
LYRJ01000056
Bacillota
Lactobacillus crispatus UMNLC20 [LYRJ]
1324
1414
+
Ser
GCT
[ENA]
¡û
>W1910653830
LYRM01000056
Bacillota
Lactobacillus crispatus UMNLC23 [LYRM]
10913
10823
-
Ser
GCT
[ENA]
¡û
>W1910653949
LYRO01000059
Bacillota
Lactobacillus crispatus UMNLC25 [LYRO]
1324
1414
+
Ser
GCT
[ENA]
¡û
>W1910755353
MKXG01000400
Bacillota
Lactobacillus crispatus DISK12 [MKXG]
25317
25226
-
Ser
GCT
[ENA]
¡û
>W1910922979
NIGM01000103
Bacillota
Lactobacillus helveticus M92 [NIGM]
1313
1404
+
Ser
GCT
[ENA]
¡û
>W1910923403
NIGX01000119
Bacillota
Lactobacillus helveticus LMG S-29187 [NIGX]
1328
1419
+
Ser
GCT
[ENA]
¡û
>W1910979114
NKKS01000038
Bacillota
Lactobacillus crispatus RL31 [NKKS]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979178
NKKT01000034
Bacillota
Lactobacillus crispatus RL30 [NKKT]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979243
NKKU01000037
Bacillota
Lactobacillus crispatus RL29 [NKKU]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979308
NKKV01000042
Bacillota
Lactobacillus crispatus RL28 [NKKV]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979369
NKKW01000039
Bacillota
Lactobacillus crispatus RL27 [NKKW]
1430
1521
+
Ser
GCT
[ENA]
¡û
>W1910979498
NKKY01000035
Bacillota
Lactobacillus crispatus RL25 [NKKY]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979552
NKKZ01000036
Bacillota
Lactobacillus crispatus RL24 [NKKZ]
357
447
+
Ser
GCT
[ENA]
¡û
>W1910979622
NKLA01000035
Bacillota
Lactobacillus crispatus RL23 [NKLA]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979687
NKLB01000044
Bacillota
Lactobacillus crispatus RL21 [NKLB]
1430
1521
+
Ser
GCT
[ENA]
¡û
>W1910979814
NKLD01000036
Bacillota
Lactobacillus crispatus RL19 [NKLD]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910979945
NKLF01000039
Bacillota
Lactobacillus crispatus RL16 [NKLF]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910980075
NKLH01000039
Bacillota
Lactobacillus crispatus RL14 [NKLH]
1430
1521
+
Ser
GCT
[ENA]
¡û
>W1910980205
NKLJ01000039
Bacillota
Lactobacillus crispatus RL11 [NKLJ]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910980300
NKLK01000277
Bacillota
Lactobacillus crispatus RL10 [NKLK]
752
662
-
Ser
GCT
[ENA]
¡û
>W1910980388
NKLM01000033
Bacillota
Lactobacillus crispatus RL08 [NKLM]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910980569
NKLP01000039
Bacillota
Lactobacillus crispatus RL05 [NKLP]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1910980693
NKLR01000033
Bacillota
Lactobacillus crispatus RL02 [NKLR]
1431
1521
+
Ser
GCT
[ENA]
¡û
>W1911160236
NPNG01000019
Bacillota
Lactobacillus bombicola H70-3 [NPNG]
4198
4108
-
Ser
GCT
[ENA]
¡û
>W1911160294
NPNH01000016
Bacillota
Lactobacillus panisapium 2·î3Æü [NPNH]
34
125
+
Ser
GCT
[ENA]
¡û
>W1911218724
NRQX01000272
Bacillota
Lactobacillus helveticus UC1156 [NRQX]
1389
1480
+
Ser
GCT
[ENA]
¡û
>W1911531924
OGTV01000037
Bacillota
Lactobacillus helveticus [OGTV]
11885
11794
-
Ser
GCT
[ENA]
¡û
>W1911531979
OGTV02000037
Bacillota
Lactobacillus helveticus [OGTV]
11885
11794
-
Ser
GCT
[ENA]
¡û
>W1911569410
PCYT01000053
Bacillota
Lactobacillus sp. UMNPBX17 [PCYT]
10916
10825
-
Ser
GCT
[ENA]
¡û
>W1911569531
PCYV01000046
Bacillota
Lactobacillus sp. UMNPBX15 [PCYV]
10800
10710
-
Ser
GCT
[ENA]
¡û
>W1911569573
PCYW01000053
Bacillota
Lactobacillus sp. UMNPBX14 [PCYW]
10905
10814
-
Ser
GCT
[ENA]
¡û
>W1911569756
PCYZ01000049
Bacillota
Lactobacillus sp. UMNPBX11 [PCYZ]
2501
2411
-
Ser
GCT
[ENA]
¡û
>W1911569864
PCZB01000060
Bacillota
Lactobacillus sp. UMNPBX8 [PCZB]
1178
1088
-
Ser
GCT
[ENA]
¡û
>W1911569971
PCZD01000053
Bacillota
Lactobacillus sp. UMNPBX6 [PCZD]
10905
10814
-
Ser
GCT
[ENA]
¡û
>W1911570085
PCZF01000047
Bacillota
Lactobacillus sp. UMNPBX4 [PCZF]
10916
10825
-
Ser
GCT
[ENA]
¡û
>W1911570263
PCZI01000029
Bacillota
Lactobacillus sp. UMNPBX1 [PCZI]
671
761
+
Ser
GCT
[ENA]
¡û
>W1911702467
QOCT01000010
Bacillota
Lactobacillus bombicola L5-31 [QOCT]
111779
111689
-
Ser
GCT
[ENA]
¡û
>W1911702496
QOCU01000001
Bacillota
Lactobacillus bombicola BI-4G [QOCU]
331105
331015
-
Ser
GCT
[ENA]
¡û
>W1911702552
QOCV01000006
Bacillota
Lactobacillus bombicola OCC3 [QOCV]
1343
1433
+
Ser
GCT
[ENA]
¡û
>W1810058626
PDKP01000001
Bacillota
Lactobacillus apis LMG 26964 [PDKP]
766
857
+
Ser
GCT
[ENA]
¡û
>W1810177315
PJRL01000041
Bacillota
Lactobacillus helveticus ATCC 12046 [PJRL]
596
505
-
Ser
GCT
[ENA]
¡û
>W1810189137
PKIV01000026
Bacillota
Lactobacillus crispatus UMB0824 [PKIV]
26716
26625
-
Ser
GCT
[ENA]
¡û
>W1810189206
PKIW01000089
Bacillota
Lactobacillus crispatus UMB0085 [PKIW]
1441
1532
+
Ser
GCT
[ENA]
¡û
>W1810189318
PKIY01000062
Bacillota
Lactobacillus crispatus UMB0803 [PKIY]
10888
10798
-
Ser
GCT
[ENA]
¡û
>W1810190983
PKKF01000088
Bacillota
Lactobacillus crispatus UMB0054 [PKKF]
1458
1548
+
Ser
GCT
[ENA]
¡û
>W1810191033
PKKG01000068
Bacillota
Lactobacillus crispatus UMB1398 [PKKG]
1479
1569
+
Ser
GCT
[ENA]
¡û
>W1810191118
PKKH01000068
Bacillota
Lactobacillus crispatus UMB0040 [PKKH]
1391
1482
+
Ser
GCT
[ENA]
¡û
>W1810473246
QAHI01000123
Bacillota
Lactobacillus helveticus DS21_8 [QAHI]
821
730
-
Ser
GCT
[ENA]
¡û
>W1810473409
QAHL01000014
Bacillota
Lactobacillus acidophilus DS20_1 [QAHL]
1417
1508
+
Ser
GCT
[ENA]
¡û
>W1810473468
QAHM01000016
Bacillota
Lactobacillus acidophilus DS13_1B [QAHM]
1289
1380
+
Ser
GCT
[ENA]
¡û
>W1810473527
QAHN01000014
Bacillota
Lactobacillus acidophilus DS9_1A [QAHN]
13620
13529
-
Ser
GCT
[ENA]
¡û
>W1810473647
QAHP01000013
Bacillota
Lactobacillus acidophilus DS5_1A [QAHP]
1417
1508
+
Ser
GCT
[ENA]
¡û
>W1810473825
QAHS01000014
Bacillota
Lactobacillus acidophilus DS11_1A [QAHS]
13620
13529
-
Ser
GCT
[ENA]
¡û
>W1810473885
QAHT01000014
Bacillota
Lactobacillus acidophilus DS1_1A [QAHT]
13620
13529
-
Ser
GCT
[ENA]
¡û
>W1810489079
QAZT01000113
Bacillota
Lactobacillus helveticus DS18_8 [QAZT]
821
730
-
Ser
GCT
[ENA]
¡û
>W1810489357
QAZY01000014
Bacillota
Lactobacillus acidophilus DS10_1A [QAZY]
1417
1508
+
Ser
GCT
[ENA]
¡û
>W1810603455
QGLG01000002
Bacillota
Lactobacillus melliventris ESL0184 [QGLG]
186324
186415
+
Ser
GCT
[ENA]
¡û
>W1810665845
QJOG01000046
Bacillota
Lactobacillus helveticus FAM22157 [QJOG]
11025
10934
-
Ser
GCT
[ENA]
¡û
>W1810665928
QJOH01000180
Bacillota
Lactobacillus helveticus FAM22076 [QJOH]
271
362
+
Ser
GCT
[ENA]
¡û
>W1810665965
QJOI01000056
Bacillota
Lactobacillus helveticus FAM13019 [QJOI]
10969
10878
-
Ser
GCT
[ENA]
¡û
>W1810666021
QJOJ01000054
Bacillota
Lactobacillus helveticus FAM1450 [QJOJ]
11785
11694
-
Ser
GCT
[ENA]
¡û
>W1810666086
QJOK01000047
Bacillota
Lactobacillus helveticus FAM1213 [QJOK]
10888
10797
-
Ser
GCT
[ENA]
¡û
>W1810666166
QJOL01000191
Bacillota
Lactobacillus helveticus FAM1182 [QJOL]
271
362
+
Ser
GCT
[ENA]
¡û
>W1810666197
QJOM01000042
Bacillota
Lactobacillus helveticus FAM23285 [QJOM]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810666264
QJON01000049
Bacillota
Lactobacillus helveticus FAM19191 [QJON]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810666328
QJOO01000049
Bacillota
Lactobacillus helveticus FAM19188 [QJOO]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810666385
QJOP01000039
Bacillota
Lactobacillus helveticus FAM14499 [QJOP]
10743
10652
-
Ser
GCT
[ENA]
¡û
>W1810666449
QJOQ01000050
Bacillota
Lactobacillus helveticus FAM8102 [QJOQ]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810666510
QJOR01000048
Bacillota
Lactobacillus helveticus FAM14275 [QJOR]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810666570
QJOS01000052
Bacillota
Lactobacillus helveticus FAM8106 [QJOS]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810679603
QKQX01000049
Bacillota
Lactobacillus helveticus FAM21493 [QKQX]
10854
10763
-
Ser
GCT
[ENA]
¡û
>W1810815340
QSAX01000044
Bacillota
Lactobacillus amylovorus AF08-3 [QSAX]
1269
1360
+
Ser
GCT
[ENA]
¡û
>C151003260
AP014808
Bacillota
Lactobacillus acetotolerans NBRC 13120 [AP014808]
479599
479690
+
Ser
GCT
[Ensembl]
¡û
>C151003420
CP002427
Bacillota
Lactobacillus helveticus H9 [CP002427]
1543168
1543077
-
Ser
GCT
[Ensembl]
¡û
>C151053160
CP009531
Bacillota
Lactobacillus sp. wkB8 [CP009531]
486022
486112
+
Ser
GCT
[Ensembl]
¡û
>C151061695
CP009907
Bacillota
Lactobacillus helveticus KLDS1.8701 [CP009907]
640561
640652
+
Ser
GCT
[Ensembl]
¡û
>C151068730
CP010432
Bacillota
Lactobacillus acidophilus FSI4 [CP010432]
420473
420564
+
Ser
GCT
[Ensembl]
¡û
>C151081837
CP011386
Bacillota
Lactobacillus helveticus MB2-1 [CP011386]
419623
419714
+
Ser
GCT
[Ensembl]
¡û
>W10102015
ACOG01000144
Bacillota
Lactobacillus crispatus MV-1A-US [ACOG]
52866
52775
-
Ser
GCT
[ENA]
¡û
>W10103205
ACQC01000163
Bacillota
Lactobacillus crispatus MV-3A-US [ACQC]
1047
955
-
Ser
GCT
[ENA]
¡û
>W10111772
ADDT01000146
Bacillota
Lactobacillus crispatus SJ-3C-US [ADDT]
1576
1668
+
Ser
GCT
[ENA]
¡û
>W1510072881
CDLD01000007
Bacillota
Lactobacillus sp. OTU4228 sp. [CDLD]
298
389
+
Ser
GCT
[ENA]
¡û
>W10113948
ADGR01000179
Bacillota
Lactobacillus crispatus 214-1 [ADGR]
1284
1376
+
Ser
GCT
[ENA]
¡û
>C10108295
FN692037
Bacillota
Lactobacillus crispatus ST1 [FN692037]
434318
434410
+
Ser
GCT
[Ensembl]
¡û
>W11102171
ACOG01000144
Bacillota
Lactobacillus crispatus MV-1A-US [ACOG]
52866
52775
-
Ser
GCT
[ENA]
¡û
>W11103361
ACQC01000163
Bacillota
Lactobacillus crispatus MV-3A-US [ACQC]
1047
955
-
Ser
GCT
[ENA]
¡û
>C11112023
CP002609
Bacillota
Lactobacillus amylovorus GRL1118 [CP002609]
419481
419572
+
Ser
GCT
[Ensembl]
¡û
>C11112987
CP002764
Bacillota
Lactobacillus kefiranofaciens subsp. kefiranofaciens ZW3 [CP002764]
131475
131566
+
Ser
GCT
[Ensembl]
¡û
>W11114749
ADDT01000146
Bacillota
Lactobacillus crispatus SJ-3C-US [ADDT]
1576
1668
+
Ser
GCT
[ENA]
¡û
>W1511347235
JRJB01000026
Bacillota
Lactobacillus sp. wkB10 [JRJB]
691
601
-
Ser
GCT
[ENA]
¡û
>W11117284
ADGR01000179
Bacillota
Lactobacillus crispatus 214-1 [ADGR]
1284
1376
+
Ser
GCT
[ENA]
¡û
>W1511354456
JRQG01000045
Bacillota
Lactobacillus helveticus ATCC 10386 [JRQG]
141
232
+
Ser
GCT
[ENA]
¡û
>W1511355767
JRTS01000045
Bacillota
Lactobacillus helveticus M3 [JRTS]
219
310
+
Ser
GCT
[ENA]
¡û
>W1511356898
JRUT01000008
Bacillota
Lactobacillus acidophilus ATCC 4356 [JRUT]
270
361
+
Ser
GCT
[ENA]
¡û
>W1511501567
JXBY01000013
Bacillota
Lactobacillus kullabergensis Biut2 [JXBY]
1330
1420
+
Ser
GCT
[ENA]
¡û
>W1511505331
JXJR01000005
Bacillota
Lactobacillus helsingborgensis Bma5 [JXJR]
1322
1412
+
Ser
GCT
[ENA]
¡û
>W1511505420
JXLG01000005
Bacillota
Lactobacillus apis Hma11 [JXLG]
1339
1430
+
Ser
GCT
[ENA]
¡û
>W1511505468
JXLH01000007
Bacillota
Lactobacillus kimbladii Hma2 [JXLH]
1321
1413
+
Ser
GCT
[ENA]
¡û
>W1511505517
JXLI01000009
Bacillota
Lactobacillus melliventris Hma8 [JXLI]
1332
1424
+
Ser
GCT
[ENA]
¡û
>W11138521
AEIR01000004
Bacillota
Lactobacillus helveticus R0052 [AEIR]
246178
246087
-
Ser
GCT
[ENA]
¡û
>W11152538
AEYL01000492
Bacillota
Lactobacillus helveticus MTCC 5463 [AEYL]
1579
1670
+
Ser
GCT
[ENA]
¡û
>W1610031799
AYZC01000095
Bacillota
Lactobacillus acetotolerans DSM 20749 = JCM 3825 [AYZC]
910
819
-
Ser
GCT
[ENA]
¡û
>W1610032403
AYZP01000037
Bacillota
Lactobacillus hominis DSM 23910 = CRBIP 24.179 [AYZP]
31
122
+
Ser
GCT
[ENA]
¡û
>W1610032839
AZCM01000042
Bacillota
Lactobacillus amylovorus DSM 20531 [AZCM]
1487
1578
+
Ser
GCT
[ENA]
¡û
>W1610033179
AZCS01000015
Bacillota
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 [AZCS]
13578
13487
-
Ser
GCT
[ENA]
¡û
>W1610035348
AZEK01000185
Bacillota
Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 [AZEK]
1247
1338
+
Ser
GCT
[ENA]
¡û
>W1610035398
AZEL01000075
Bacillota
Lactobacillus gallinarum DSM 10532 = JCM 2011 [AZEL]
10650
10559
-
Ser
GCT
[ENA]
¡û
>W1610035446
AZEM01000126
Bacillota
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM [AZEM]
10524
10433
-
Ser
GCT
[ENA]
¡û
>W1610036814
AZFO01000063
Bacillota
Lactobacillus ultunensis DSM 16047 [AZFO]
3820
3729
-
Ser
GCT
[ENA]
¡û
>W1610037124
AZFU01000045
Bacillota
Lactobacillus kitasatonis DSM 16761 = JCM 1039 [AZFU]
13687
13596
-
Ser
GCT
[ENA]
¡û
>W1610037763
AZGG01000101
Bacillota
Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM [AZGG]
808
717
-
Ser
GCT
[ENA]
¡û
>W1610044581
BBAQ01000045
Bacillota
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM [BBAQ]
1459
1550
+
Ser
GCT
[ENA]
¡û
>W1610045754
BBBU01000043
Bacillota
Lactobacillus acetotolerans DSM 20749 = JCM 3825 [BBBU]
11127
11036
-
Ser
GCT
[ENA]
¡û
>W1610073149
BCVR01000011
Bacillota
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 [BCVR]
1291
1382
+
Ser
GCT
[ENA]
¡û
>C131001254
CP002081
Bacillota
Lactobacillus helveticus CNRZ32 [CP002081]
1888779
1888688
-
Ser
GCT
[Ensembl]
¡û
>C131007113
CP003799
Bacillota
Lactobacillus helveticus R0052 [CP003799]
461183
461274
+
Ser
GCT
[Ensembl]
¡û
>W1610514749
FMAN01000001
Bacillota
Lactobacillus apis [FMAN]
793875
793784
-
Ser
GCT
[ENA]
¡û
>W1610528911
JQBQ01000115
Bacillota
Lactobacillus amylovorus DSM 16698 [JQBQ]
229
320
+
Ser
GCT
[ENA]
¡û
>W1610529830
JQCJ01000174
Bacillota
Lactobacillus helveticus [JQCJ]
230
321
+
Ser
GCT
[ENA]
¡û
>W1610642742
LJCZ01000087
Bacillota
Lactobacillus crispatus [LJCZ]
1208
1300
+
Ser
GCT
[ENA]
¡û
>W1610642787
LJDA01000171
Bacillota
Lactobacillus crispatus [LJDA]
634
726
+
Ser
GCT
[ENA]
¡û
>W1610656434
LJOK01000191
Bacillota
Lactobacillus crispatus [LJOK]
1240
1148
-
Ser
GCT
[ENA]
¡û
>W1610656542
LJOM01000137
Bacillota
Lactobacillus crispatus [LJOM]
5322
5230
-
Ser
GCT
[ENA]
¡û
>W1610656602
LJON01000117
Bacillota
Lactobacillus crispatus [LJON]
1324
1416
+
Ser
GCT
[ENA]
¡û
>W1610919351
LSQY01000189
Bacillota
Lactobacillus crispatus [LSQY]
982
890
-
Ser
GCT
[ENA]
¡û
>W1610922643
LSVI01000048
Bacillota
Lactobacillus helveticus [LSVI]
1391
1482
+
Ser
GCT
[ENA]
¡û
>W1610922724
LSVJ01000142
Bacillota
Lactobacillus helveticus [LSVJ]
1391
1482
+
Ser
GCT
[ENA]
¡û
>W1610926367
LTDX01000092
Bacillota
Lactobacillus acetotolerans [LTDX]
677
586
-
Ser
GCT
[ENA]
¡û
>W1611054592
MAKH01000002
Bacillota
Lactobacillus crispatus [MAKH]
2338
2247
-
Ser
GCT
[ENA]
¡û
>W1611054876
MAMR01000291
Bacillota
Lactobacillus crispatus [MAMR]
568
477
-
Ser
GCT
[ENA]
¡û
>W1710028726
AYZC01000095
Bacillota
Lactobacillus acetotolerans DSM 20749 = JCM 3825 [AYZC]
910
819
-
Ser
GCT
[ENA]
¡û
>W1710030170
AZCM01000042
Bacillota
Lactobacillus amylovorus DSM 20531 [AZCM]
1487
1578
+
Ser
GCT
[ENA]
¡û
>W1710030451
AZCS01000015
Bacillota
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 [AZCS]
13578
13487
-
Ser
GCT
[ENA]
¡û
>W1710032437
AZEL01000075
Bacillota
Lactobacillus gallinarum DSM 10532 = JCM 2011 [AZEL]
10650
10559
-
Ser
GCT
[ENA]
¡û
>W1710032485
AZEM01000126
Bacillota
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM [AZEM]
10524
10433
-
Ser
GCT
[ENA]
¡û
>W1710033853
AZFO01000063
Bacillota
Lactobacillus ultunensis DSM 16047 [AZFO]
3820
3729
-
Ser
GCT
[ENA]
¡û
>W1710034163
AZFU01000045
Bacillota
Lactobacillus kitasatonis DSM 16761 = JCM 1039 [AZFU]
13687
13596
-
Ser
GCT
[ENA]
¡û
>W1710034802
AZGG01000101
Bacillota
Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM [AZGG]
808
717
-
Ser
GCT
[ENA]
¡û
>W1710041679
BBAQ01000045
Bacillota
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM [BBAQ]
1459
1550
+
Ser
GCT
[ENA]
¡û
>W1710042595
BBBU01000043
Bacillota
Lactobacillus acetotolerans DSM 20749 = JCM 3825 [BBBU]
11127
11036
-
Ser
GCT
[ENA]
¡û
>W1710070267
BCVR01000011
Bacillota
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 [BCVR]
1291
1382
+
Ser
GCT
[ENA]
¡û
>W1710082770
BDHM01000002
Bacillota
Lactobacillus acidophilus [BDHM]
1310
1401
+
Ser
GCT
[ENA]
¡û
>W1710500439
FMAN01000001
Bacillota
Lactobacillus apis [FMAN]
793875
793784
-
Ser
GCT
[ENA]
¡û
>W1710509304
FMXC01000044
Bacillota
Lactobacillus kefiranofaciens [FMXC]
10457
10366
-
Ser
GCT
[ENA]
¡û
>W1710559304
FOMN01000006
Bacillota
Lactobacillus bombicola [FOMN]
1672
1764
+
Ser
GCT
[ENA]
¡û
>W1710630501
JQBQ01000115
Bacillota
Lactobacillus amylovorus DSM 16698 [JQBQ]
229
320
+
Ser
GCT
[ENA]
¡û
>W1710631420
JQCJ01000174
Bacillota
Lactobacillus helveticus [JQCJ]
230
321
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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