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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.719683 (3 seq.)
>W1910734505
MHKB01000002
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14 [MHKB]
23786
23859
+
Phe
GAA
[ENA]
¡û
>W1910734696
MHKF01000013
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_02_FULL_42_19 [MHKF]
71035
70962
-
Phe
GAA
[ENA]
¡û
>W1910734743
MHKG01000027
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_12_FULL_43_9 [MHKG]
14241
14168
-
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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