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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.720618 (5 seq.)
>W141757541
JNXY01000026
Actinomycetota
Catenuloplanes japonicus [JNXY]
154110
154182
+
Gln
TTG
[ENA]
¡û
>W1610052415
BBHW01001054
Actinomycetota
Catenuloplanes japonicus JCM 9106 [BBHW]
996
1068
+
Gln
TTG
[ENA]
¡û
>W1610052457
BBHX01000325
Actinomycetota
Catenuloplanes crispus JCM 9312 [BBHX]
278
206
-
Gln
TTG
[ENA]
¡û
>W1710048793
BBHW01001054
Actinomycetota
Catenuloplanes japonicus JCM 9106 [BBHW]
996
1068
+
Gln
TTG
[ENA]
¡û
>W1710048835
BBHX01000325
Actinomycetota
Catenuloplanes crispus JCM 9312 [BBHX]
278
206
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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