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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.721050 (4 seq.)
>W1710799539
LJUU01000063
Unclassified
Omnitrophica WOR_2 bacterium SM23_72 [LJUU]
7626
7555
-
Gly
GCC
[ENA]
¡û
>W1711417743
MHGH01000005
Unclassified
Omnitrophica WOR_2 bacterium RBG_13_41_10 [MHGH]
21263
21334
+
Gly
GCC
[ENA]
¡û
>WENV183677793
ORJL011799332
[ORJL] groundwater metagenome; groundwater
360
431
+
Gly
GCC
[ENA]
¢þ
>W1610663496
LJUU01000063
Unclassified
Omnitrophica WOR_2 bacterium SM23_72 [LJUU]
7626
7555
-
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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