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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.721839 (5 seq.)
>WENV181227613
OFDN01022216
[OFDN] hot springs metagenome; Water
56
130
+
Asn
GTT
[ENA]
¢þ
>W1911139230
NOXS01000032
Alphaproteobacteria
Elstera cyanobacteriorum TH019 [NOXS]
234103
234177
+
Asn
GTT
[ENA]
¡û
>W1911139231
NOXS01000032
Alphaproteobacteria
Elstera cyanobacteriorum TH019 [NOXS]
234211
234285
+
Asn
GTT
[ENA]
¡û
>W1511569454
LAJY01000472
Alphaproteobacteria
Elstera litoralis Dia-1 [LAJY]
691
617
-
Asn
GTT
[ENA]
¡û
>W1511569455
LAJY01000472
Alphaproteobacteria
Elstera litoralis Dia-1 [LAJY]
580
506
-
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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