This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.780123 (218 seq.)
>W1710785717
LJIC01000071
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
17214
17287
+
Gln
CTG
[ENA]
¡û
>W1710802941
LJYE01000104
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
49661
49734
+
Gln
CTG
[ENA]
¡û
>W1710802979
LJYF01000031
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
145997
146070
+
Gln
CTG
[ENA]
¡û
>W1710803044
LJYG01000112
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
297747
297674
-
Gln
CTG
[ENA]
¡û
>W1710855041
LLXZ01000064
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
83274
83347
+
Gln
CTG
[ENA]
¡û
>W1710855133
LLYB01000046
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
57383
57456
+
Gln
CTG
[ENA]
¡û
>W1710877731
LMQJ01000003
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
137447
137374
-
Gln
CTG
[ENA]
¡û
>W1710891424
LNCU01000097
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
29173
29100
-
Gln
CTG
[ENA]
¡û
>W1711067413
LSEF01000088
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
4594
4521
-
Gln
CTG
[ENA]
¡û
>W1711072998
LSIC01000121
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
127727
127800
+
Gln
CTG
[ENA]
¡û
>W1711124778
LUKO01000022
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
183492
183419
-
Gln
CTG
[ENA]
¡û
>W131164094
ARAG01000009
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [ARAG]
308906
308979
+
Gln
CTG
[ENA]
¡û
>W131164971
ARBF01000056
Alphaproteobacteria
Bradyrhizobium sp. WSM2793 WSM2793 [ARBF]
39460
39533
+
Gln
CTG
[ENA]
¡û
>W1711129591
LUUB01000054
Alphaproteobacteria
Bradyrhizobium centrolobii BR 10245 [LUUB]
307995
307922
-
Gln
CTG
[ENA]
¡û
>W1711138866
LVEM01000001
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
2187225
2187152
-
Gln
CTG
[ENA]
¡û
>W131170228
ARFJ01000005
Alphaproteobacteria
Bradyrhizobium japonicum USDA 124 [ARFJ]
234769
234842
+
Gln
CTG
[ENA]
¡û
>W1711180124
LWIG01000026
Alphaproteobacteria
Bradyrhizobium sacchari BR10280 [LWIG]
390327
390254
-
Gln
CTG
[ENA]
¡û
>W1711193145
LWUI01000021
Alphaproteobacteria
Bradyrhizobium elkanii [LWUI]
33102
33175
+
Gln
CTG
[ENA]
¡û
>W1711206738
LXEM01000020
Alphaproteobacteria
Bradyrhizobium elkanii [LXEM]
172011
171938
-
Gln
CTG
[ENA]
¡û
>W131217298
ATWP01000002
Alphaproteobacteria
Bradyrhizobium japonicum is5 [ATWP]
517014
516941
-
Gln
CTG
[ENA]
¡û
>W1711317174
MAXB01000055
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
54729
54802
+
Gln
CTG
[ENA]
¡û
>W1711317211
MAXC01000012
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
503577
503650
+
Gln
CTG
[ENA]
¡û
>W131227248
AUEZ01000080
Alphaproteobacteria
Bradyrhizobium sp. Ai1a-2 [AUEZ]
33483
33410
-
Gln
CTG
[ENA]
¡û
>W131227266
AUFA01000005
Alphaproteobacteria
Bradyrhizobium sp. Cp5.3 [AUFA]
260819
260746
-
Gln
CTG
[ENA]
¡û
>W131228530
AUGA01000003
Alphaproteobacteria
Bradyrhizobium sp. th.b2 [AUGA]
272173
272246
+
Gln
CTG
[ENA]
¡û
>W131228670
AUGD01000002
Alphaproteobacteria
Bradyrhizobium japonicum in8p8 [AUGD]
723173
723100
-
Gln
CTG
[ENA]
¡û
>W1711487051
MKFI01000002
Alphaproteobacteria
Bradyrhizobium mercantei SEMIA 6399 [MKFI]
1037524
1037451
-
Gln
CTG
[ENA]
¡û
>W1711501145
MKRG01000060
Alphaproteobacteria
Afipia sp. 62-7 [MKRG]
9010
8937
-
Gln
CTG
[ENA]
¡û
>W1711504235
MKUJ01000001
Alphaproteobacteria
Afipia sp. 64-13 [MKUJ]
477981
477908
-
Gln
CTG
[ENA]
¡û
>W1711613010
MOXO01000062
Alphaproteobacteria
Bradyrhizobium elkanii [MOXO]
10279
10206
-
Gln
CTG
[ENA]
¡û
>W1711636726
MPVQ01000032
Alphaproteobacteria
Bradyrhizobium brasilense UFLA 03-321 [MPVQ]
358296
358369
+
Gln
CTG
[ENA]
¡û
>W1711928958
NAFL01000260
Alphaproteobacteria
Bradyrhizobium japonicum [NAFL]
83046
82973
-
Gln
CTG
[ENA]
¡û
>W1712049607
NFUH01000187
Alphaproteobacteria
Bradyrhizobium guangdongense [NFUH]
31516
31443
-
Gln
CTG
[ENA]
¡û
>C171021116
CP013127
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [CP013127]
5789697
5789624
-
Gln
CTG
-
¡û
>C171064688
CP017637
Alphaproteobacteria
Bradyrhizobium japonicum J5 [CP017637]
6357277
6357204
-
Gln
CTG
-
¡û
>C171131942
LT859959
Alphaproteobacteria
Bradyrhizobium sp. ORS 285 [LT859959]
4396821
4396894
+
Gln
CTG
-
¡û
>C003053
BA000040
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 USDA110 [BA000040]
4317579
4317652
+
Gln
CTG
[Ensembl]
¡û
>C004073
CP000494
Alphaproteobacteria
Bradyrhizobium sp. BTAi1 [CP000494]
3688300
3688227
-
Gln
CTG
[Ensembl]
¡û
>C004095
CU234118
Alphaproteobacteria
Bradyrhizobium sp. ORS 278 ORS278 [CU234118]
4849563
4849636
+
Gln
CTG
[Ensembl]
¡û
>W141001289
ADOU01000068
Alphaproteobacteria
Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU]
111782
111855
+
Gln
CTG
[ENA]
¡û
>W141007560
AGWZ01000001
Alphaproteobacteria
Afipia felis ATCC 53690 [AGWZ]
1171025
1170952
-
Gln
CTG
[ENA]
¡û
>W141041855
AMCQ01001052
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [AMCQ]
933
860
-
Gln
CTG
[ENA]
¡û
>W141043076
AMFB01000055
Alphaproteobacteria
Bradyrhizobium sp. DFCI-1 [AMFB]
9546
9473
-
Gln
CTG
[ENA]
¡û
>W141063653
APJD01000014
Alphaproteobacteria
Bradyrhizobium sp. OHSU_III [APJD]
159797
159870
+
Gln
CTG
[ENA]
¡û
>W08007843
ABKN01000001
Alphaproteobacteria
Afipia carboxidovorans OM5 [ABKN]
2434885
2434958
+
Gln
CTG
[ENA]
¡û
>WENV181166341
OEIU01000107
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
58900
58827
-
Gln
CTG
[ENA]
¢þ
>WENV181167280
OEIU01017573
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
861
788
-
Gln
CTG
[ENA]
¢þ
>WENV181168869
OEIU01854285
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
74
1
-
Gln
CTG
[ENA]
¢þ
>WENV181311655
OFJB01006997
[OFJB] sludge metagenome; sludge
1721
1794
+
Gln
CTG
[ENA]
¢þ
>WENV181379322
OFRD01000474
[OFRD] wastewater metagenome; Exp Tend CN 100WW
5887
5960
+
Gln
CTG
[ENA]
¢þ
>WENV181384027
OFRH01008059
[OFRH] wastewater metagenome; Exp Tend NO 100WW
712
785
+
Gln
CTG
[ENA]
¢þ
>WENV181384595
OFRI01003345
[OFRI] wastewater metagenome; Exp Tend VB 90WW
2706
2779
+
Gln
CTG
[ENA]
¢þ
>WENV181385943
OFRL01000181
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
6871
6798
-
Gln
CTG
[ENA]
¢þ
>WENV181399873
OFSF01000110
[OFSF] wastewater metagenome; Exp Tend VB 100WW
27397
27470
+
Gln
CTG
[ENA]
¢þ
>W141149766
AWZU01000030
Alphaproteobacteria
Bradyrhizobium sp. ARR65 [AWZU]
44722
44649
-
Gln
CTG
[ENA]
¡û
>W141150025
AXAB01000003
Alphaproteobacteria
Bradyrhizobium sp. WSM2254 [AXAB]
288002
287929
-
Gln
CTG
[ENA]
¡û
>W141150108
AXAD01000001
Alphaproteobacteria
Bradyrhizobium arachidis USDA 3384 [AXAD]
375387
375460
+
Gln
CTG
[ENA]
¡û
>W141150207
AXAF01000001
Alphaproteobacteria
Bradyrhizobium ottawaense USDA 4 [AXAF]
811918
811845
-
Gln
CTG
[ENA]
¡û
>W141150276
AXAG01000013
Alphaproteobacteria
Bradyrhizobium japonicum USDA 38 [AXAG]
321436
321363
-
Gln
CTG
[ENA]
¡û
>W141150324
AXAH01000011
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3254 [AXAH]
279064
279137
+
Gln
CTG
[ENA]
¡û
>W141150366
AXAI01000006
Alphaproteobacteria
Bradyrhizobium sp. Tv2a-2 [AXAI]
331945
331872
-
Gln
CTG
[ENA]
¡û
>W141150718
AXAP01000020
Alphaproteobacteria
Bradyrhizobium elkanii WSM2783 [AXAP]
21112
21185
+
Gln
CTG
[ENA]
¡û
>W141150997
AXAS01000016
Alphaproteobacteria
Bradyrhizobium sp. Ec3.3 [AXAS]
140008
139935
-
Gln
CTG
[ENA]
¡û
>W141151060
AXAT01000205
Alphaproteobacteria
Bradyrhizobium japonicum USDA 135 [AXAT]
1010
937
-
Gln
CTG
[ENA]
¡û
>W141151080
AXAU01000001
Alphaproteobacteria
Bradyrhizobium murdochi WSM1741 [AXAU]
1399425
1399498
+
Gln
CTG
[ENA]
¡û
>W141151133
AXAV01000009
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AXAV]
114312
114239
-
Gln
CTG
[ENA]
¡û
>W141151192
AXAW01000008
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3259 [AXAW]
279064
279137
+
Gln
CTG
[ENA]
¡û
>W141151216
AXAX01000001
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [AXAX]
399900
399973
+
Gln
CTG
[ENA]
¡û
>W141151313
AXAZ01000003
Alphaproteobacteria
Bradyrhizobium sp. WSM1743 [AXAZ]
211412
211485
+
Gln
CTG
[ENA]
¡û
>W141151470
AXBC01000003
Alphaproteobacteria
Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC]
2672580
2672507
-
Gln
CTG
[ENA]
¡û
>W141168829
AXVG01000011
Alphaproteobacteria
Bradyrhizobium japonicum 22 [AXVG]
765788
765861
+
Gln
CTG
[ENA]
¡û
>W141169177
AXVP01000001
Alphaproteobacteria
Bradyrhizobium japonicum USDA 123 [AXVP]
69768
69695
-
Gln
CTG
[ENA]
¡û
>W141223300
BADD01000147
Alphaproteobacteria
Rhodopseudomonas sp. B29 [BADD]
1610
1537
-
Gln
CTG
[ENA]
¡û
>W141233887
BAWE01000004
Alphaproteobacteria
Bradyrhizobium sp. DOA9 [BAWE]
2264298
2264371
+
Gln
CTG
[ENA]
¡û
>WENV182409090
OIFG01001391
[OIFG] human gut metagenome; stool
612
685
+
Gln
CTG
[ENA]
¢þ
>WENV182412644
OIFV01000635
[OIFV] human gut metagenome; stool
750
823
+
Gln
CTG
[ENA]
¢þ
>W141240077
CAFK01000088
Alphaproteobacteria
Bradyrhizobium sp. STM 3843 [CAFK]
59162
59235
+
Gln
CTG
[ENA]
¡û
>W141261727
CCAZ010000147
Alphaproteobacteria
Afipia felis [CCAZ]
3867
3794
-
Gln
CTG
[ENA]
¡û
>W141278091
JAFC01000001
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
113559
113632
+
Gln
CTG
[ENA]
¡û
>WENV182962899
OKWO01005585
[OKWO] human gut metagenome; stool
441
514
+
Gln
CTG
[ENA]
¢þ
>WENV182962960
OKWP01000034
[OKWP] human gut metagenome; stool
126121
126048
-
Gln
CTG
[ENA]
¢þ
>WENV182966381
OKWV01003671
[OKWV] human gut metagenome; stool
480
407
-
Gln
CTG
[ENA]
¢þ
>WENV182966592
OKWW01004426
[OKWW] human gut metagenome; stool
540
613
+
Gln
CTG
[ENA]
¢þ
>WENV183724375
PJQE01010672
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
1359
1432
+
Gln
CTG
[ENA]
¢þ
>WENV183726479
PJQF01218132
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
135
208
+
Gln
CTG
[ENA]
¢þ
>WENV183729080
PJTQ01004020
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
1343
1270
-
Gln
CTG
[ENA]
¢þ
>WENV183740363
PJUF01001429
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
6012
6085
+
Gln
CTG
[ENA]
¢þ
>WENV183745234
PJUL01007980
[PJUL] feces metagenome; Chicken feces enriched on filter paper
139
212
+
Gln
CTG
[ENA]
¢þ
>WENV170565994
FKKE01003619
[FKKE] freshwater metagenome; freshwater
1239
1166
-
Gln
CTG
[ENA]
¢þ
>WENV170576574
FRDC01000954
[FRDC] freshwater metagenome; water
104235
104162
-
Gln
CTG
[ENA]
¢þ
>WENV170706569
LNAP01004305
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
6534
6607
+
Gln
CTG
[ENA]
¢þ
>WENV170706977
LNAP01010207
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
6425
6498
+
Gln
CTG
[ENA]
¢þ
>C181113187
CP025113
Alphaproteobacteria
Bradyrhizobium sp. SK17 [CP025113]
6055795
6055868
+
Gln
CTG
-
¡û
>C181178158
CP029425
Alphaproteobacteria
Bradyrhizobium ottawaense OO99 [CP029425]
7145891
7145818
-
Gln
CTG
-
¡û
>C181178186
CP029426
Alphaproteobacteria
Bradyrhizobium amphicarpaeae 39S1MB [CP029426]
2676998
2677071
+
Gln
CTG
-
¡û
>C181178230
CP029427
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 85S1MB [CP029427]
2505918
2505991
+
Gln
CTG
-
¡û
>C181181557
CP029603
Alphaproteobacteria
Bradyrhizobium diazoefficiens XF7 [CP029603]
4535077
4535150
+
Gln
CTG
-
¡û
>C181203869
LS398110
Alphaproteobacteria
Bradyrhizobium vignae [LS398110]
4759802
4759729
-
Gln
CTG
-
¡û
>C191019682
CP022219
Alphaproteobacteria
Bradyrhizobium guangxiense CCBAU 53363 [CP022219]
2494144
2494217
+
Gln
CTG
-
¡û
>C191019751
CP022221
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51778 [CP022221]
5851186
5851113
-
Gln
CTG
-
¡û
>C191071686
CP030051
Alphaproteobacteria
Bradyrhizobium guangdongense CCBAU 51649 [CP030051]
4957234
4957161
-
Gln
CTG
-
¡û
>C191071736
CP030053
Alphaproteobacteria
Bradyrhizobium guangzhouense CCBAU 51670 [CP030053]
4357363
4357290
-
Gln
CTG
-
¡û
>C191092023
CP032617
Alphaproteobacteria
Bradyrhizobium diazoefficiens 110spc4 [CP032617]
4253224
4253297
+
Gln
CTG
-
¡û
>C191186625
CP041090
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 65S1MB [CP041090]
1577289
1577362
+
Gln
CTG
-
¡û
>W09104116
AALJ01000004
Alphaproteobacteria
Bradyrhizobium sp. BTAi1 [AALJ]
400669
400742
+
Gln
CTG
[ENA]
¡û
>W1910183074
BJNK01000006
Alphaproteobacteria
Bradyrhizobium japonicum NBRC 14783 [BJNK]
114043
113970
-
Gln
CTG
[ENA]
¡û
>W1910183105
BJNL01000001
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
162364
162437
+
Gln
CTG
[ENA]
¡û
>C09108142
CP001196
Alphaproteobacteria
Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196]
2434571
2434644
+
Gln
CTG
-
¡û
>W1910598260
LAXE01000001
Alphaproteobacteria
Bradyrhizobium sp. SUTN9-2 [LAXE]
5282852
5282779
-
Gln
CTG
[ENA]
¡û
>W1910598952
LBJC01000031
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 53390 [LBJC]
21972
21899
-
Gln
CTG
[ENA]
¡û
>W1910599018
LBJM01000195
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51787 [LBJM]
9884
9811
-
Gln
CTG
[ENA]
¡û
>W1910599067
LBJQ01000093
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 51757 [LBJQ]
21985
21912
-
Gln
CTG
[ENA]
¡û
>W1910611560
LFJC01000003
Alphaproteobacteria
Bradyrhizobium nitroreducens TSA1 [LFJC]
7684565
7684638
+
Gln
CTG
[ENA]
¡û
>W1910693472
MDEP01000044
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
183242
183169
-
Gln
CTG
[ENA]
¡û
>W1910840280
MZXW01000035
Alphaproteobacteria
Bradyrhizobium betae Opo-243 [MZXW]
449023
448950
-
Gln
CTG
[ENA]
¡û
>W1911245278
NSJY01000014
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
657541
657614
+
Gln
CTG
[ENA]
¡û
>W1911409815
NWTE01000097
Alphaproteobacteria
Bradyrhizobium diazoefficiens Y21 [NWTE]
2103
2030
-
Gln
CTG
[ENA]
¡û
>W1911409816
NWTF01000001
Alphaproteobacteria
Bradyrhizobium ottawaense L2 [NWTF]
273914
273987
+
Gln
CTG
[ENA]
¡û
>W1911409901
NWTG01000005
Alphaproteobacteria
Bradyrhizobium sp. C9 [NWTG]
153347
153274
-
Gln
CTG
[ENA]
¡û
>W1911410004
NWTI01000009
Alphaproteobacteria
Bradyrhizobium sp. Y36 [NWTI]
123270
123343
+
Gln
CTG
[ENA]
¡û
>W1911629520
PSRR01000270
Alphaproteobacteria
Bradyrhizobium sp. Leo170 [PSRR]
1563
1490
-
Gln
CTG
[ENA]
¡û
>W1911629561
PSRS01000090
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
3706
3633
-
Gln
CTG
[ENA]
¡û
>W1911629593
PSRT01000033
Alphaproteobacteria
Bradyrhizobium genosp. SA-3 SA-3 Rp7b [PSRT]
38936
39009
+
Gln
CTG
[ENA]
¡û
>W1911809238
QYYD01000025
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.18 [QYYD]
57185
57112
-
Gln
CTG
[ENA]
¡û
>W1911817889
QZMV01000017
Alphaproteobacteria
Bradyrhizobium sp. LVM 105 [QZMV]
75298
75225
-
Gln
CTG
[ENA]
¡û
>W1810104409
PGVG01000006
Alphaproteobacteria
Bradyrhizobium forestalis INPA54B [PGVG]
196420
196493
+
Gln
CTG
[ENA]
¡û
>W1810289888
PTFE01000137
Alphaproteobacteria
Bradyrhizobium sp. AC87j1 [PTFE]
8867
8794
-
Gln
CTG
[ENA]
¡û
>W1810367876
PVYZ01000013
Alphaproteobacteria
Rhizobium tropici NFR14 [PVYZ]
52577
52504
-
Gln
CTG
[ENA]
¡û
>W1810400125
PYFV01000023
Alphaproteobacteria
Bradyrhizobium sp. MOS004 [PYFV]
78255
78182
-
Gln
CTG
[ENA]
¡û
>W1810400166
PYFW01000008
Alphaproteobacteria
Bradyrhizobium sp. MOS003 [PYFW]
111512
111585
+
Gln
CTG
[ENA]
¡û
>W1810679411
QKQS01000001
Alphaproteobacteria
Rhodopseudomonas palustris XCP [QKQS]
176591
176664
+
Gln
CTG
[ENA]
¡û
>W1810787494
QRDT01000002
Alphaproteobacteria
Rhodopseudomonas pentothenatexigens JA575 [QRDT]
287593
287666
+
Gln
CTG
[ENA]
¡û
>W1810884391
QUMP01000002
Alphaproteobacteria
Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP]
287591
287664
+
Gln
CTG
[ENA]
¡û
>C151066553
CP010313
Alphaproteobacteria
Bradyrhizobium japonicum E109 [CP010313]
6042800
6042727
-
Gln
CTG
[Ensembl]
¡û
>W10112824
ADFI01000015
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
181049
181122
+
Gln
CTG
[ENA]
¡û
>W10119563
ADVZ01000002
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
216586
216659
+
Gln
CTG
[ENA]
¡û
>C11116292
CP002821
Alphaproteobacteria
Afipia carboxidovorans OM4 [CP002821]
1691074
1691001
-
Gln
CTG
[Ensembl]
¡û
>W1510973741
JGCL01000013
Alphaproteobacteria
Bradyrhizobium japonicum FN1 [JGCL]
239859
239932
+
Gln
CTG
[ENA]
¡û
>W11116051
ADFI01000015
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
181049
181122
+
Gln
CTG
[ENA]
¡û
>C11118777
CP002418
Alphaproteobacteria
Rhodopseudomonas palustris [CP002418]
2019847
2019774
-
Gln
CTG
[Ensembl]
¡û
>W1511353630
JRPN01000020
Alphaproteobacteria
Bradyrhizobium japonicum Is-34 [JRPN]
244394
244467
+
Gln
CTG
[ENA]
¡û
>W11125829
ADVZ01000002
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
216586
216659
+
Gln
CTG
[ENA]
¡û
>W1511508010
JXOF01000187
Alphaproteobacteria
Bradyrhizobium elkanii UASWS1015 [JXOF]
496658
496731
+
Gln
CTG
[ENA]
¡û
>W1511533264
JYMR01000012
Alphaproteobacteria
Bradyrhizobium sp. LTSP849 [JYMR]
48657
48584
-
Gln
CTG
[ENA]
¡û
>W1511533296
JYMS01000007
Alphaproteobacteria
Bradyrhizobium sp. LTSP857 [JYMS]
506489
506416
-
Gln
CTG
[ENA]
¡û
>W1511625961
LCZM01000299
Alphaproteobacteria
Rhodopseudomonas palustris 42OL [LCZM]
1362
1435
+
Gln
CTG
[ENA]
¡û
>W1511681432
LFIP01000109
Alphaproteobacteria
Bradyrhizobium embrapense SEMIA 6208 [LFIP]
34551
34478
-
Gln
CTG
[ENA]
¡û
>W1511681487
LFIQ01000108
Alphaproteobacteria
Bradyrhizobium pachyrhizi PAC 48 [LFIQ]
54203
54130
-
Gln
CTG
[ENA]
¡û
>W1511684010
LFLZ01000001
Alphaproteobacteria
Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ]
79840
79913
+
Gln
CTG
[ENA]
¡û
>W1511705991
LGTB01000008
Alphaproteobacteria
Bradyrhizobium viridifuturi SEMIA 690 [LGTB]
146943
146870
-
Gln
CTG
[ENA]
¡û
>W1511706683
LGUJ01000004
Alphaproteobacteria
Bradyrhizobium diazoefficiens Is-1 [LGUJ]
544839
544766
-
Gln
CTG
[ENA]
¡û
>C121000483
AP012206
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AP012206]
6011090
6011017
-
Gln
CTG
[Ensembl]
¡û
>C121000740
AP012279
Alphaproteobacteria
Bradyrhizobium cosmicum S23321 [AP012279]
4438552
4438479
-
Gln
CTG
[Ensembl]
¡û
>C121003012
CP002826
Alphaproteobacteria
Afipia carboxidovorans OM5 [CP002826]
1689936
1689863
-
Gln
CTG
-
¡û
>C161001030
AP014685
Alphaproteobacteria
Bradyrhizobium diazoefficiens NK6 [AP014685]
7964699
7964772
+
Gln
CTG
-
¡û
>C161017407
CP007569
Alphaproteobacteria
Bradyrhizobium japonicum SEMIA 5079 [CP007569]
3106289
3106216
-
Gln
CTG
[Ensembl]
¡û
>C161034225
CP011360
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 [CP011360]
3637257
3637330
+
Gln
CTG
-
¡û
>C161062525
CP013949
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [CP013949]
3545879
3545952
+
Gln
CTG
[Ensembl]
¡û
>C161097220
CP016428
Alphaproteobacteria
Bradyrhizobium icense LMTR 13 [CP016428]
3240251
3240178
-
Gln
CTG
[Ensembl]
¡û
>C161107943
LN907826
Alphaproteobacteria
Bradyrhizobium sp. [LN907826]
5970897
5970824
-
Gln
CTG
-
¡û
>W121065195
AJPV01000175
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 05737 [AJPV]
47405
47478
+
Gln
CTG
[ENA]
¡û
>W121065253
AJPW01000338
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 43297 [AJPW]
6432
6505
+
Gln
CTG
[ENA]
¡û
>W121065290
AJPX01000242
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15354 [AJPX]
13207
13280
+
Gln
CTG
[ENA]
¡û
>W121065330
AJPY01000097
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15517 [AJPY]
13218
13291
+
Gln
CTG
[ENA]
¡û
>W121065378
AJPZ01000052
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15618 [AJPZ]
7973
8046
+
Gln
CTG
[ENA]
¡û
>W121065421
AJQA01000056
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 25435 [AJQA]
64652
64579
-
Gln
CTG
[ENA]
¡û
>W121065468
AJQB01000046
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 83623 [AJQB]
59549
59476
-
Gln
CTG
[ENA]
¡û
>W121065548
AJQC01000516
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 05525 [AJQC]
1216
1143
-
Gln
CTG
[ENA]
¡û
>W121065587
AJQD01000440
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 83689 [AJQD]
1217
1144
-
Gln
CTG
[ENA]
¡û
>W121065625
AJQE01000165
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 43298 [AJQE]
22080
22007
-
Gln
CTG
[ENA]
¡û
>W121065654
AJQF01000015
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15544 [AJQF]
66332
66405
+
Gln
CTG
[ENA]
¡û
>W121065707
AJQG01000021
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15615 [AJQG]
32404
32331
-
Gln
CTG
[ENA]
¡û
>W121065758
AJQH01000071
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15635 [AJQH]
8141
8068
-
Gln
CTG
[ENA]
¡û
>W121065817
AJQI01000208
Alphaproteobacteria
Bradyrhizobium diazoefficiens CCBAU 41267 [AJQI]
9023
9096
+
Gln
CTG
[ENA]
¡û
>W121065846
AJQJ01000036
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ]
3929
3856
-
Gln
CTG
[ENA]
¡û
>W121065898
AJQK01000058
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 25021 [AJQK]
75563
75636
+
Gln
CTG
[ENA]
¡û
>W121065949
AJQL01000093
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 35157 [AJQL]
3909
3836
-
Gln
CTG
[ENA]
¡û
>W121085079
AKIY01000205
Alphaproteobacteria
Bradyrhizobium sp. YR681 [AKIY]
15083
15010
-
Gln
CTG
[ENA]
¡û
>W121127061
CAFH01000003
Alphaproteobacteria
Bradyrhizobium sp. ORS 285 [CAFH]
135357
135430
+
Gln
CTG
[ENA]
¡û
>W121127129
CAFI01000199
Alphaproteobacteria
Bradyrhizobium sp. ORS 375 [CAFI]
25660
25587
-
Gln
CTG
[ENA]
¡û
>W121127175
CAFJ01000304
Alphaproteobacteria
Bradyrhizobium sp. STM 3809 [CAFJ]
1682
1755
+
Gln
CTG
[ENA]
¡û
>W1610049381
BBEX01000048
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
386
459
+
Gln
CTG
[ENA]
¡û
>C131000839
AP012603
Alphaproteobacteria
Bradyrhizobium oligotrophicum S58 [AP012603]
3419639
3419566
-
Gln
CTG
[Ensembl]
¡û
>W1610514421
FMAE01000004
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
306669
306742
+
Gln
CTG
[ENA]
¡û
>W1610514591
FMAI01000002
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
146811
146884
+
Gln
CTG
[ENA]
¡û
>W1610549130
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
27603
27676
+
Gln
CTG
[ENA]
¡û
>W1610550316
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
3768788
3768715
-
Gln
CTG
[ENA]
¡û
>W1610649523
LJIC01000071
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
17214
17287
+
Gln
CTG
[ENA]
¡û
>W1610666798
LJYE01000104
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
49661
49734
+
Gln
CTG
[ENA]
¡û
>W1610666836
LJYF01000031
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
145997
146070
+
Gln
CTG
[ENA]
¡û
>W1610666901
LJYG01000112
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
297747
297674
-
Gln
CTG
[ENA]
¡û
>W1610717382
LLXZ01000064
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
83274
83347
+
Gln
CTG
[ENA]
¡û
>W1610717474
LLYB01000046
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
57383
57456
+
Gln
CTG
[ENA]
¡û
>W1610740077
LMQJ01000003
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
137447
137374
-
Gln
CTG
[ENA]
¡û
>W1610751789
LNCU01000097
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
29173
29100
-
Gln
CTG
[ENA]
¡û
>W1610907983
LSEF01000088
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
4594
4521
-
Gln
CTG
[ENA]
¡û
>W1610912258
LSIC01000121
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
127727
127800
+
Gln
CTG
[ENA]
¡û
>W1610935750
LUKO01000022
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
183492
183419
-
Gln
CTG
[ENA]
¡û
>W1610940664
LUUB01000054
Alphaproteobacteria
Bradyrhizobium centrolobii BR 10245 [LUUB]
307995
307922
-
Gln
CTG
[ENA]
¡û
>W1610949874
LVEM01000001
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
2187225
2187152
-
Gln
CTG
[ENA]
¡û
>W1611061244
MAXB01000055
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
54729
54802
+
Gln
CTG
[ENA]
¡û
>W1611061281
MAXC01000012
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
503577
503650
+
Gln
CTG
[ENA]
¡û
>W1710045780
BBEX01000048
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
386
459
+
Gln
CTG
[ENA]
¡û
>W1710500111
FMAE01000004
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
306669
306742
+
Gln
CTG
[ENA]
¡û
>W1710500281
FMAI01000002
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
146811
146884
+
Gln
CTG
[ENA]
¡û
>W1710513060
FMZW01000024
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
54488
54415
-
Gln
CTG
[ENA]
¡û
>W1710516757
FNCU01000015
Alphaproteobacteria
Bradyrhizobium sp. Rc2d [FNCU]
32139
32066
-
Gln
CTG
[ENA]
¡û
>W1710536564
FNTH01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FNTH]
27553
27626
+
Gln
CTG
[ENA]
¡û
>W1710564253
FOQJ01000001
Alphaproteobacteria
Bradyrhizobium sp. cf659 [FOQJ]
1231973
1231900
-
Gln
CTG
[ENA]
¡û
>W1710564427
FOQM01000015
Alphaproteobacteria
Bradyrhizobium sp. Gha [FOQM]
89761
89834
+
Gln
CTG
[ENA]
¡û
>W1710569792
FOUS01000002
Alphaproteobacteria
Bradyrhizobium sp. Rc3b [FOUS]
407506
407579
+
Gln
CTG
[ENA]
¡û
>W1710571292
FOVU01000002
Alphaproteobacteria
Bradyrhizobium sp. Ghvi [FOVU]
733041
732968
-
Gln
CTG
[ENA]
¡û
>W1710578523
FPBQ01000010
Alphaproteobacteria
Bradyrhizobium arachidis [FPBQ]
233448
233521
+
Gln
CTG
[ENA]
¡û
>W1710652704
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
27603
27676
+
Gln
CTG
[ENA]
¡û
>W1710659042
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
3768788
3768715
-
Gln
CTG
[ENA]
¡û
>W1710735610
LGHK01000268
Alphaproteobacteria
Bradyrhizobium sp. NAS96.2 [LGHK]
1725
1798
+
Gln
CTG
[ENA]
¡û
>W1710735637
LGHL01000053
Alphaproteobacteria
Bradyrhizobium sp. NAS80.1 [LGHL]
14667
14740
+
Gln
CTG
[ENA]
¡û
>W1710735688
LGHM01000059
Alphaproteobacteria
Bradyrhizobium sp. AS23.2 [LGHM]
7438
7511
+
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK