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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.780482 (266 seq.)
>W1711174339
LWED01000051
Gammaproteobacteria
Shewanella baltica [LWED]
190021
190094
+
Cys
GCA
[ENA]
¡û
>W1711174356
LWED01000067
Gammaproteobacteria
Shewanella baltica [LWED]
210
137
-
Cys
GCA
[ENA]
¡û
>W1711326666
MBFW01000025
Gammaproteobacteria
Shewanella algae [MBFW]
88360
88287
-
Cys
GCA
[ENA]
¡û
>W1711326686
MBFW01000042
Gammaproteobacteria
Shewanella algae [MBFW]
123306
123233
-
Cys
GCA
[ENA]
¡û
>W1711340546
MCBT01000001
Gammaproteobacteria
Shewanella colwelliana [MCBT]
90
17
-
Cys
GCA
[ENA]
¡û
>W1711340598
MCBT01000048
Gammaproteobacteria
Shewanella colwelliana [MCBT]
291236
291309
+
Cys
GCA
[ENA]
¡û
>W1711340601
MCBT01000048
Gammaproteobacteria
Shewanella colwelliana [MCBT]
355558
355631
+
Cys
GCA
[ENA]
¡û
>W1711360862
MDKA01000007
Gammaproteobacteria
Shewanella algae [MDKA]
150
223
+
Cys
GCA
[ENA]
¡û
>W1711360879
MDKA01000024
Gammaproteobacteria
Shewanella algae [MDKA]
4303
4230
-
Cys
GCA
[ENA]
¡û
>W1711621581
MPDG02000001
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
1231475
1231548
+
Cys
GCA
[ENA]
¡û
>W1711621591
MPDG02000001
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
1724330
1724257
-
Cys
GCA
[ENA]
¡û
>W1711624442
MPHJ01000004
Gammaproteobacteria
Shewanella sp. UCD-KL12 [MPHJ]
245615
245688
+
Cys
GCA
[ENA]
¡û
>W1711624459
MPHJ01000008
Gammaproteobacteria
Shewanella sp. UCD-KL12 [MPHJ]
89441
89514
+
Cys
GCA
[ENA]
¡û
>W1711934413
NAJR01000004
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
479695
479622
-
Cys
GCA
[ENA]
¡û
>W1711934434
NAJR01000010
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
49557
49630
+
Cys
GCA
[ENA]
¡û
>PL171000274
CP000564
Gammaproteobacteria
Shewanella baltica OS155 plasmid:pSbal01
21036
20963
-
Cys
GCA
[ENA]
¡û
>C171033346
CP014782
Gammaproteobacteria
Shewanella psychrophila WP2 [CP014782]
654725
654798
+
Cys
GCA
-
¡û
>C171033349
CP014782
Gammaproteobacteria
Shewanella psychrophila WP2 [CP014782]
1015212
1015285
+
Cys
GCA
-
¡û
>WENV012692
AACY020345984
Marine microbial communities from Global Ocean Sampling (GOS)
37
110
+
Cys
GCA
[ENA]
>C019793
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1968189
1968262
+
Cys
GCA
[Ensembl]
¡û
>C019851
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
2198047
2197974
-
Cys
GCA
[Ensembl]
¡û
>C020702
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
2998200
2998127
-
Cys
GCA
[Ensembl]
¡û
>C020707
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
2562432
2562359
-
Cys
GCA
[Ensembl]
¡û
>C020942
CP000302
Gammaproteobacteria
Shewanella denitrificans OS217 [CP000302]
1677746
1677819
+
Cys
GCA
[Ensembl]
¡û
>C022248
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
1892613
1892686
+
Cys
GCA
[Ensembl]
¡û
>C022282
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
2546265
2546192
-
Cys
GCA
[Ensembl]
¡û
>C022350
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1830657
1830730
+
Cys
GCA
[Ensembl]
¡û
>C022383
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
2406216
2406143
-
Cys
GCA
[Ensembl]
¡û
>C022446
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
1902185
1902258
+
Cys
GCA
[Ensembl]
¡û
>C022451
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
2308625
2308698
+
Cys
GCA
[Ensembl]
¡û
>C022585
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
2747086
2747013
-
Cys
GCA
[Ensembl]
¡û
>C022592
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
2437993
2437920
-
Cys
GCA
[Ensembl]
¡û
>C022684
CP000606
Gammaproteobacteria
Shewanella loihica PV-4 [CP000606]
2102606
2102679
+
Cys
GCA
[Ensembl]
¡û
>C022723
CP000606
Gammaproteobacteria
Shewanella loihica PV-4 [CP000606]
2312125
2312052
-
Cys
GCA
[Ensembl]
¡û
>C022934
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
1955222
1955295
+
Cys
GCA
[Ensembl]
¡û
>C022940
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
2456939
2457012
+
Cys
GCA
[Ensembl]
¡û
>C023245
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
1872616
1872689
+
Cys
GCA
[Ensembl]
¡û
>C023252
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
2164681
2164754
+
Cys
GCA
[Ensembl]
¡û
>w028544
ABDD01000021
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [ABDD]
242
315
+
Cys
GCA
[ENA]
¡û
>w024920
AAZC01000071
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
2980
3055
+
Cys
GCA
[ENA]
¡û
>w022872
AAWY01000016
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
46380
46453
+
Cys
GCA
[ENA]
¡û
>w022863
AAWY01000012
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
15978
16051
+
Cys
GCA
[ENA]
¡û
>w021133
AAVJ01000067
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
2435
2365
-
Cys
GCA
[ENA]
¡û
>w021131
AAVJ01000067
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
3169
3099
-
Cys
GCA
[ENA]
¡û
>w021129
AAVJ01000067
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
4058
3988
-
Cys
GCA
[ENA]
¡û
>w021125
AAVJ01000046
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
24361
24291
-
Cys
GCA
[ENA]
¡û
>w020052
AAUO01000079
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [AAUO]
7213
7286
+
Cys
GCA
[ENA]
¡û
>w020050
AAUO01000079
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [AAUO]
6300
6373
+
Cys
GCA
[ENA]
¡û
>w019994
AAUO01000026
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [AAUO]
6630
6560
-
Cys
GCA
[ENA]
¡û
>w018683
AATK01000108
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
5680
5610
-
Cys
GCA
[ENA]
¡û
>w007677
AAIU01000019
Gammaproteobacteria
Shewanella denitrificans OS-217 [AAIU]
12712
12785
+
Cys
GCA
[ENA]
¡û
>WENV180310930
OBJT01060146
[OBJT] soil metagenome; soil
388
315
-
Cys
GCA
[ENA]
¢þ
>W141171196
AXZL01000046
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
3996
4069
+
Cys
GCA
[ENA]
¡û
>W141171210
AXZL01000065
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
346
273
-
Cys
GCA
[ENA]
¡û
>C08008624
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
2572085
2572158
+
Cys
GCA
[Ensembl]
¡û
>C08008687
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3098676
3098606
-
Cys
GCA
[Ensembl]
¡û
>W141227770
BALL01000007
Gammaproteobacteria
Shewanella algae JCM 14758 [BALL]
65613
65686
+
Cys
GCA
[ENA]
¡û
>W141227781
BALL01000014
Gammaproteobacteria
Shewanella algae JCM 14758 [BALL]
4523
4596
+
Cys
GCA
[ENA]
¡û
>W141227945
BALO01000006
Gammaproteobacteria
Shewanella algae JCM 21037 [BALO]
4689
4762
+
Cys
GCA
[ENA]
¡û
>W141227962
BALO01000014
Gammaproteobacteria
Shewanella algae JCM 21037 [BALO]
102192
102119
-
Cys
GCA
[ENA]
¡û
>C08010603
CP000821
Gammaproteobacteria
Shewanella sediminis HAW-EB3 [CP000821]
2977955
2977885
-
Cys
GCA
[Ensembl]
¡û
>C08010155
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
2379856
2379929
+
Cys
GCA
[Ensembl]
¡û
>C08010158
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
2550946
2551019
+
Cys
GCA
[Ensembl]
¡û
>C08010160
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
2551835
2551908
+
Cys
GCA
[Ensembl]
¡û
>C08010162
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
2552569
2552642
+
Cys
GCA
[Ensembl]
¡û
>C08008730
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
2621172
2621245
+
Cys
GCA
[Ensembl]
¡û
>C08008791
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
3173974
3173904
-
Cys
GCA
[Ensembl]
¡û
>WENV182560747
OJDU01040778
[OJDU] seawater metagenome; Sea water
207
277
+
Cys
GCA
[ENA]
¢þ
>WENV182590658
OJIJ01002678
[OJIJ] seawater metagenome; Sea water
199
272
+
Cys
GCA
[ENA]
¢þ
>C08009857
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
2505317
2505390
+
Cys
GCA
[Ensembl]
¡û
>C08009899
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
2831995
2831925
-
Cys
GCA
[Ensembl]
¡û
>C08009901
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
2831059
2830989
-
Cys
GCA
[Ensembl]
¡û
>W141276177
JADP01000002
Gammaproteobacteria
Shewanella sp. 38A_GOM-205m [JADP]
149467
149394
-
Cys
GCA
[ENA]
¡û
>W141276187
JADP01000006
Gammaproteobacteria
Shewanella sp. 38A_GOM-205m [JADP]
133752
133679
-
Cys
GCA
[ENA]
¡û
>W141276564
JADX01000009
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
225196
225123
-
Cys
GCA
[ENA]
¡û
>W141276585
JADX01000014
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
234
161
-
Cys
GCA
[ENA]
¡û
>W141276595
JADX01000024
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
67484
67411
-
Cys
GCA
[ENA]
¡û
>W141276800
JAEC01000003
Gammaproteobacteria
Shewanella colwelliana ATCC 39565 [JAEC]
70898
70971
+
Cys
GCA
[ENA]
¡û
>W141276808
JAEC01000004
Gammaproteobacteria
Shewanella colwelliana ATCC 39565 [JAEC]
126196
126123
-
Cys
GCA
[ENA]
¡û
>W141277040
JAEH01000007
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
153814
153741
-
Cys
GCA
[ENA]
¡û
>W141277054
JAEH01000021
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
69869
69942
+
Cys
GCA
[ENA]
¡û
>W141277071
JAEH01000036
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
61914
61841
-
Cys
GCA
[ENA]
¡û
>W141277086
JAEH01000076
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
9117
9190
+
Cys
GCA
[ENA]
¡û
>W141277685
JAEU01000003
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
7540
7613
+
Cys
GCA
[ENA]
¡û
>W141277692
JAEU01000006
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
406894
406821
-
Cys
GCA
[ENA]
¡û
>C08010736
CP000961
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [CP000961]
2642687
2642760
+
Cys
GCA
[Ensembl]
¡û
>C08010738
CP000961
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [CP000961]
2643600
2643673
+
Cys
GCA
[Ensembl]
¡û
>C08010741
CP000961
Gammaproteobacteria
Shewanella woodyi ATCC 51908 [CP000961]
2936924
2936997
+
Cys
GCA
[Ensembl]
¡û
>WENV170022215
BCQK01001784
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
3400
3473
+
Cys
GCA
[ENA]
¢þ
>WENV170022981
BCQK01095269
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
118
45
-
Cys
GCA
[ENA]
¢þ
>WENV170023375
BCQK01244432
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
2
75
+
Cys
GCA
[ENA]
¢þ
>WENV021060
AACY020561938
Marine microbial communities from Global Ocean Sampling (GOS)
30186
30113
-
Cys
GCA
[ENA]
>WENV021185
AACY020563688
Marine microbial communities from Global Ocean Sampling (GOS)
31983
31910
-
Cys
GCA
[ENA]
>C181016820
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
2948325
2948398
+
Cys
GCA
-
¡û
>C181016875
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
3492910
3492837
-
Cys
GCA
-
¡û
>C181057529
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
943510
943583
+
Cys
GCA
-
¡û
>C181057595
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
1531782
1531709
-
Cys
GCA
-
¡û
>C181061311
CP022272
Gammaproteobacteria
Shewanella marisflavi EP1 [CP022272]
2135490
2135563
+
Cys
GCA
-
¡û
>C181061357
CP022272
Gammaproteobacteria
Shewanella marisflavi EP1 [CP022272]
2337380
2337307
-
Cys
GCA
-
¡û
>C181062957
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
2310654
2310727
+
Cys
GCA
-
¡û
>C181063017
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
2916438
2916365
-
Cys
GCA
-
¡û
>C181075036
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3960803
3960876
+
Cys
GCA
-
¡û
>C181075043
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
4415156
4415229
+
Cys
GCA
-
¡û
>C181164512
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
3874458
3874531
+
Cys
GCA
-
¡û
>C181164517
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
4185096
4185169
+
Cys
GCA
-
¡û
>C181165465
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
809637
809564
-
Cys
GCA
-
¡û
>C181165472
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
502704
502631
-
Cys
GCA
-
¡û
>C181167890
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
2374157
2374230
+
Cys
GCA
-
¡û
>C181167953
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
2848050
2847977
-
Cys
GCA
-
¡û
>C191015500
CP018456
Gammaproteobacteria
Shewanella algae CCU101 [CP018456]
3791469
3791542
+
Cys
GCA
-
¡û
>C191015540
CP018456
Gammaproteobacteria
Shewanella algae CCU101 [CP018456]
4094094
4094021
-
Cys
GCA
-
¡û
>C191017583
CP020373
Gammaproteobacteria
Shewanella khirikhana TH2012 [CP020373]
1456473
1456546
+
Cys
GCA
-
¡û
>C191017654
CP020373
Gammaproteobacteria
Shewanella khirikhana TH2012 [CP020373]
1701052
1700979
-
Cys
GCA
-
¡û
>W141520051
JGVI01000040
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
18613
18686
+
Cys
GCA
[ENA]
¡û
>W141520064
JGVI01000058
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
44998
45071
+
Cys
GCA
[ENA]
¡û
>C191107819
CP033575
Gammaproteobacteria
Shewanella algae KC-Na-R1 [CP033575]
2557897
2557970
+
Cys
GCA
-
¡û
>C191107879
CP033575
Gammaproteobacteria
Shewanella algae KC-Na-R1 [CP033575]
2846707
2846634
-
Cys
GCA
-
¡û
>C191148715
CP036200
Gammaproteobacteria
Shewanella maritima D4-2 [CP036200]
3930341
3930414
+
Cys
GCA
-
¡û
>C191148731
CP036200
Gammaproteobacteria
Shewanella maritima D4-2 [CP036200]
4645139
4645212
+
Cys
GCA
-
¡û
>C191155887
CP037951
Gammaproteobacteria
Parashewanella tropica MEBiC05444 [CP037951]
1886021
1886094
+
Cys
GCA
-
¡û
>C191155923
CP037951
Gammaproteobacteria
Parashewanella tropica MEBiC05444 [CP037951]
2723801
2723728
-
Cys
GCA
-
¡û
>C191155986
CP037952
Gammaproteobacteria
Parashewanella spongiae HJ039 [CP037952]
2384930
2385003
+
Cys
GCA
-
¡û
>C191155992
CP037952
Gammaproteobacteria
Parashewanella spongiae HJ039 [CP037952]
2632943
2633016
+
Cys
GCA
-
¡û
>C191187051
CP041151
Gammaproteobacteria
Shewanella sp. SNU WT4 [CP041151]
2182031
2182104
+
Cys
GCA
-
¡û
>C191187128
CP041151
Gammaproteobacteria
Shewanella sp. SNU WT4 [CP041151]
2547618
2547545
-
Cys
GCA
-
¡û
>C191187196
CP041153
Gammaproteobacteria
Shewanella marisflavi ECSMB14101 [CP041153]
2099491
2099564
+
Cys
GCA
-
¡û
>C191187243
CP041153
Gammaproteobacteria
Shewanella marisflavi ECSMB14101 [CP041153]
2301931
2301858
-
Cys
GCA
-
¡û
>C191205248
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
4106508
4106581
+
Cys
GCA
-
¡û
>C191205265
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
4776521
4776448
-
Cys
GCA
-
¡û
>C191206438
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
2050655
2050728
+
Cys
GCA
-
¡û
>C191206494
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
2586693
2586620
-
Cys
GCA
-
¡û
>W09102794
AAIN01000014
Gammaproteobacteria
Shewanella amazonensis SB2B [AAIN]
2158
2231
+
Cys
GCA
[ENA]
¡û
>W09102820
AAIN01000032
Gammaproteobacteria
Shewanella amazonensis SB2B [AAIN]
30619
30692
+
Cys
GCA
[ENA]
¡û
>W09102917
AAIO01000157
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
3120
3193
+
Cys
GCA
[ENA]
¡û
>W09103903
AALB01000001
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
14341
14414
+
Cys
GCA
[ENA]
¡û
>W09103958
AALB01000057
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
18335
18262
-
Cys
GCA
[ENA]
¡û
>W09104066
AALH01000040
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
44192
44119
-
Cys
GCA
[ENA]
¡û
>W09104282
AALN01000009
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
43941
43868
-
Cys
GCA
[ENA]
¡û
>W09104304
AALN01000045
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
23032
22959
-
Cys
GCA
[ENA]
¡û
>W09104479
AALS01000019
Gammaproteobacteria
Shewanella loihica PV-4 [AALS]
23597
23524
-
Cys
GCA
[ENA]
¡û
>W09104484
AALS01000028
Gammaproteobacteria
Shewanella loihica PV-4 [AALS]
48318
48245
-
Cys
GCA
[ENA]
¡û
>W09104586
AALX01000008
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
34807
34880
+
Cys
GCA
[ENA]
¡û
>W09104621
AALX01000059
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
18300
18227
-
Cys
GCA
[ENA]
¡û
>W141801958
JPEO01000002
Gammaproteobacteria
Shewanella mangrovi YQH10 [JPEO]
97009
96936
-
Cys
GCA
[ENA]
¡û
>W141801992
JPEO01000007
Gammaproteobacteria
Shewanella mangrovi YQH10 [JPEO]
152019
151946
-
Cys
GCA
[ENA]
¡û
>C09109173
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
2101292
2101365
+
Cys
GCA
[Ensembl]
¡û
>C09109217
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
2644992
2644919
-
Cys
GCA
[Ensembl]
¡û
>C09109816
CP000472
Gammaproteobacteria
Shewanella piezotolerans WP3 [CP000472]
2664087
2664160
+
Cys
GCA
[Ensembl]
¡û
>C09109839
CP000472
Gammaproteobacteria
Shewanella piezotolerans WP3 [CP000472]
2939941
2939868
-
Cys
GCA
[Ensembl]
¡û
>W1910617456
LIRM01000039
Gammaproteobacteria
Shewanella algae MN-01 [LIRM]
63967
64040
+
Cys
GCA
[ENA]
¡û
>W1910617474
LIRM01000044
Gammaproteobacteria
Shewanella algae MN-01 [LIRM]
188963
188890
-
Cys
GCA
[ENA]
¡û
>W1910645000
LVCY01000003
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
19457
19530
+
Cys
GCA
[ENA]
¡û
>W1910645043
LVCY01000033
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
23122
23049
-
Cys
GCA
[ENA]
¡û
>W1910645069
LVDH01000001
Gammaproteobacteria
Shewanella algae AC [LVDH]
550999
551072
+
Cys
GCA
[ENA]
¡û
>W1910645092
LVDH01000001
Gammaproteobacteria
Shewanella algae AC [LVDH]
825312
825239
-
Cys
GCA
[ENA]
¡û
>W1910645149
LVDK01000001
Gammaproteobacteria
Shewanella algae SYT4 [LVDK]
238510
238583
+
Cys
GCA
[ENA]
¡û
>W1910645165
LVDK01000001
Gammaproteobacteria
Shewanella algae SYT4 [LVDK]
519539
519466
-
Cys
GCA
[ENA]
¡û
>W1910645258
LVDU01000003
Gammaproteobacteria
Shewanella algae YHL [LVDU]
156977
157050
+
Cys
GCA
[ENA]
¡û
>W1910645278
LVDU01000004
Gammaproteobacteria
Shewanella algae YHL [LVDU]
334376
334449
+
Cys
GCA
[ENA]
¡û
>W1910905559
NGVS01000023
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
77249
77322
+
Cys
GCA
[ENA]
¡û
>W1910905568
NGVS01000023
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
381689
381616
-
Cys
GCA
[ENA]
¡û
>W1910913759
NHRI01000004
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
62706
62633
-
Cys
GCA
[ENA]
¡û
>W1910913809
NHRI01000020
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
34343
34416
+
Cys
GCA
[ENA]
¡û
>W1910927027
NIJK01000007
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
95360
95433
+
Cys
GCA
[ENA]
¡û
>W1910927098
NIJK01000047
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
286747
286674
-
Cys
GCA
[ENA]
¡û
>W1910927122
NIJL01000011
Gammaproteobacteria
Shewanella algae 20-23R [NIJL]
115143
115216
+
Cys
GCA
[ENA]
¡û
>W1910927148
NIJL01000015
Gammaproteobacteria
Shewanella algae 20-23R [NIJL]
108246
108319
+
Cys
GCA
[ENA]
¡û
>W1910927244
NIJM01000014
Gammaproteobacteria
Shewanella chilikensis JC5 [NIJM]
45953
45880
-
Cys
GCA
[ENA]
¡û
>W1910927253
NIJM01000038
Gammaproteobacteria
Shewanella chilikensis JC5 [NIJM]
5918
5845
-
Cys
GCA
[ENA]
¡û
>W1911204665
NRIR01000003
Gammaproteobacteria
Paraferrimonas sedimenticola NBRC 101628 [NRIR]
433859
433932
+
Cys
GCA
[ENA]
¡û
>W1911204666
NRIR01000003
Gammaproteobacteria
Paraferrimonas sedimenticola NBRC 101628 [NRIR]
437550
437623
+
Cys
GCA
[ENA]
¡û
>W1911218995
NRRB01000004
Gammaproteobacteria
Paraferrimonas haliotis AFRC7-2-1 [NRRB]
264543
264470
-
Cys
GCA
[ENA]
¡û
>W1911218997
NRRB01000004
Gammaproteobacteria
Paraferrimonas haliotis AFRC7-2-1 [NRRB]
263203
263130
-
Cys
GCA
[ENA]
¡û
>W1911219075
NRRC01000013
Gammaproteobacteria
Paraferrimonas haliotis CFD7-4-2 [NRRC]
5997
5924
-
Cys
GCA
[ENA]
¡û
>W1911219077
NRRC01000013
Gammaproteobacteria
Paraferrimonas haliotis CFD7-4-2 [NRRC]
4657
4584
-
Cys
GCA
[ENA]
¡û
>W1911551681
OXJV01000017
Gammaproteobacteria
Shewanella algidipiscicola [OXJV]
20708
20635
-
Cys
GCA
[ENA]
¡û
>W1911551689
OXJV01000021
Gammaproteobacteria
Shewanella algidipiscicola [OXJV]
121370
121443
+
Cys
GCA
[ENA]
¡û
>W1911710027
QPQT01000006
Gammaproteobacteria
Shewanella algidipiscicola LMG 23746 [QPQT]
17732
17805
+
Cys
GCA
[ENA]
¡û
>W1911710044
QPQT01000006
Gammaproteobacteria
Shewanella algidipiscicola LMG 23746 [QPQT]
236304
236231
-
Cys
GCA
[ENA]
¡û
>W1911809443
QYYH01000006
Gammaproteobacteria
Parashewanella spongiae KCTC 22492 [QYYH]
45052
44979
-
Cys
GCA
[ENA]
¡û
>W1911809480
QYYH01000052
Gammaproteobacteria
Parashewanella spongiae KCTC 22492 [QYYH]
13976
13903
-
Cys
GCA
[ENA]
¡û
>W1911812323
QZEI01000021
Gammaproteobacteria
Parashewanella curva C51 [QZEI]
22346
22419
+
Cys
GCA
[ENA]
¡û
>W1911812334
QZEI01000029
Gammaproteobacteria
Parashewanella curva C51 [QZEI]
7887
7814
-
Cys
GCA
[ENA]
¡û
>W1810005578
BFBQ01000002
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
1305900
1305827
-
Cys
GCA
[ENA]
¡û
>W1810005580
BFBQ01000002
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
1304456
1304383
-
Cys
GCA
[ENA]
¡û
>W1810005582
BFBQ01000002
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
1303448
1303375
-
Cys
GCA
[ENA]
¡û
>W1810005593
BFBQ01000002
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
1118815
1118742
-
Cys
GCA
[ENA]
¡û
>W1810073365
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
3579604
3579677
+
Cys
GCA
[ENA]
¡û
>W1810073370
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
3646126
3646199
+
Cys
GCA
[ENA]
¡û
>W1810585857
QFDC01000014
Gammaproteobacteria
Shewanella algae Sh392 [QFDC]
7546
7619
+
Cys
GCA
[ENA]
¡û
>W1810585877
QFDC01000018
Gammaproteobacteria
Shewanella algae Sh392 [QFDC]
58445
58372
-
Cys
GCA
[ENA]
¡û
>W1810587748
QFLG01000026
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
73789
73862
+
Cys
GCA
[ENA]
¡û
>W1810671679
QJSY01000018
Gammaproteobacteria
Shewanella chilikensis JC5 [QJSY]
45993
45920
-
Cys
GCA
[ENA]
¡û
>W1810671706
QJSY01000038
Gammaproteobacteria
Shewanella chilikensis JC5 [QJSY]
5958
5885
-
Cys
GCA
[ENA]
¡û
>W1810721568
QNSC01000008
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
298753
298680
-
Cys
GCA
[ENA]
¡û
>W1810721586
QNSC01000013
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
28451
28378
-
Cys
GCA
[ENA]
¡û
>W1810786580
QRCS01000017
Gammaproteobacteria
Shewanella corallii A687 [QRCS]
332292
332219
-
Cys
GCA
[ENA]
¡û
>W1810786610
QRCS01000021
Gammaproteobacteria
Shewanella corallii A687 [QRCS]
151182
151255
+
Cys
GCA
[ENA]
¡û
>W1810786612
QRCS01000021
Gammaproteobacteria
Shewanella corallii A687 [QRCS]
151440
151513
+
Cys
GCA
[ENA]
¡û
>W1810786614
QRCS01000021
Gammaproteobacteria
Shewanella corallii A687 [QRCS]
151905
151978
+
Cys
GCA
[ENA]
¡û
>W1510077680
CDQH01000017
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
240911
240984
+
Cys
GCA
[ENA]
¡û
>W1510077726
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
201101
201028
-
Cys
GCA
[ENA]
¡û
>W10119064
ADVH01000016
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
25477
25550
+
Cys
GCA
[ENA]
¡û
>W10119080
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
40267
40194
-
Cys
GCA
[ENA]
¡û
>W10126005
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
199742
199815
+
Cys
GCA
[ENA]
¡û
>W10126018
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
763780
763707
-
Cys
GCA
[ENA]
¡û
>W10126388
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
529337
529264
-
Cys
GCA
[ENA]
¡û
>W10126415
AEDE01000005
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
396823
396896
+
Cys
GCA
[ENA]
¡û
>W1511302169
JPII01000048
Gammaproteobacteria
Shewanella sp. cp20 [JPII]
40379
40452
+
Cys
GCA
[ENA]
¡û
>W1511302176
JPII01000048
Gammaproteobacteria
Shewanella sp. cp20 [JPII]
244136
244063
-
Cys
GCA
[ENA]
¡û
>W1511306482
JPMA01000003
Gammaproteobacteria
Shewanella algae C6G3 [JPMA]
5260
5333
+
Cys
GCA
[ENA]
¡û
>W1511306490
JPMA01000003
Gammaproteobacteria
Shewanella algae C6G3 [JPMA]
331343
331270
-
Cys
GCA
[ENA]
¡û
>C11119406
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
2106783
2106856
+
Cys
GCA
[Ensembl]
¡û
>C11119444
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
2671766
2671693
-
Cys
GCA
[Ensembl]
¡û
>W1511366765
JSFF01000003
Gammaproteobacteria
Shewanella sp. ECSMB14101 [JSFF]
257403
257476
+
Cys
GCA
[ENA]
¡û
>W1511366784
JSFF01000004
Gammaproteobacteria
Shewanella sp. ECSMB14101 [JSFF]
151833
151906
+
Cys
GCA
[ENA]
¡û
>C11119546
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3095835
3095762
-
Cys
GCA
[Ensembl]
¡û
>C11119551
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
2660292
2660219
-
Cys
GCA
[Ensembl]
¡û
>C11119584
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
2581089
2581162
+
Cys
GCA
[Ensembl]
¡û
>C11119645
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3123441
3123368
-
Cys
GCA
[Ensembl]
¡û
>W1511403492
JTLE01000032
Gammaproteobacteria
Shewanella sp. ZOR0012 [JTLE]
101
174
+
Cys
GCA
[ENA]
¡û
>W1511403512
JTLE01000085
Gammaproteobacteria
Shewanella sp. ZOR0012 [JTLE]
5632
5705
+
Cys
GCA
[ENA]
¡û
>C11121516
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
1885332
1885405
+
Cys
GCA
[Ensembl]
¡û
>C11121582
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
2382300
2382227
-
Cys
GCA
[Ensembl]
¡û
>W11125236
ADVH01000016
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
25477
25550
+
Cys
GCA
[ENA]
¡û
>W11125252
ADVH01000035
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
40267
40194
-
Cys
GCA
[ENA]
¡û
>W1511477896
JWGX01000003
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
34232
34305
+
Cys
GCA
[ENA]
¡û
>W1511477908
JWGX01000006
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
129974
129901
-
Cys
GCA
[ENA]
¡û
>W11133266
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
199742
199815
+
Cys
GCA
[ENA]
¡û
>W11133279
AECY01000001
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
763780
763707
-
Cys
GCA
[ENA]
¡û
>W11133649
AEDE01000002
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
529337
529264
-
Cys
GCA
[ENA]
¡û
>W11133676
AEDE01000005
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
396823
396896
+
Cys
GCA
[ENA]
¡û
>W11169903
AFOZ01000024
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
4520
4447
-
Cys
GCA
[ENA]
¡û
>W11169917
AFOZ01000030
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
98825
98752
-
Cys
GCA
[ENA]
¡û
>W11178457
AGEX01000006
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
85163
85236
+
Cys
GCA
[ENA]
¡û
>W11178486
AGEX01000012
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
62586
62513
-
Cys
GCA
[ENA]
¡û
>W121103346
AKZL01000136
Gammaproteobacteria
Shewanella sp. POL2 [AKZL]
369
296
-
Cys
GCA
[ENA]
¡û
>W121103351
AKZL01000145
Gammaproteobacteria
Shewanella sp. POL2 [AKZL]
227
154
-
Cys
GCA
[ENA]
¡û
>W1610042083
BAXN01000008
Gammaproteobacteria
Shewanella sp. JCM 19057 [BAXN]
95077
95004
-
Cys
GCA
[ENA]
¡û
>W1610042097
BAXN01000012
Gammaproteobacteria
Shewanella sp. JCM 19057 [BAXN]
173217
173144
-
Cys
GCA
[ENA]
¡û
>W1610072074
BCUO01000008
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
65289
65362
+
Cys
GCA
[ENA]
¡û
>W1610072092
BCUO01000011
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
113400
113327
-
Cys
GCA
[ENA]
¡û
>W1610077853
BCZT01000008
Gammaproteobacteria
Shewanella algae JCM 21037 = NBRC 103173 [BCZT]
4738
4811
+
Cys
GCA
[ENA]
¡û
>W1610077866
BCZT01000030
Gammaproteobacteria
Shewanella algae JCM 21037 = NBRC 103173 [BCZT]
55041
54968
-
Cys
GCA
[ENA]
¡û
>W1610460561
FKJK01000001
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
468489
468416
-
Cys
GCA
[ENA]
¡û
>W1610460563
FKJK01000001
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
467449
467376
-
Cys
GCA
[ENA]
¡û
>W1610460566
FKJK01000001
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
186613
186540
-
Cys
GCA
[ENA]
¡û
>W1610617867
LGYY01000177
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
22421
22494
+
Cys
GCA
[ENA]
¡û
>W1610617886
LGYY01000213
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
3969
4042
+
Cys
GCA
[ENA]
¡û
>W1610982652
LWED01000051
Gammaproteobacteria
Shewanella baltica [LWED]
190021
190094
+
Cys
GCA
[ENA]
¡û
>W1610982669
LWED01000067
Gammaproteobacteria
Shewanella baltica [LWED]
210
137
-
Cys
GCA
[ENA]
¡û
>W1710039177
BAXN01000008
Gammaproteobacteria
Shewanella sp. JCM 19057 [BAXN]
95077
95004
-
Cys
GCA
[ENA]
¡û
>W1710039191
BAXN01000012
Gammaproteobacteria
Shewanella sp. JCM 19057 [BAXN]
173217
173144
-
Cys
GCA
[ENA]
¡û
>W1710069276
BCUO01000008
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
65289
65362
+
Cys
GCA
[ENA]
¡û
>W1710069294
BCUO01000011
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
113400
113327
-
Cys
GCA
[ENA]
¡û
>W1710075411
BCZT01000008
Gammaproteobacteria
Shewanella algae JCM 21037 = NBRC 103173 [BCZT]
4738
4811
+
Cys
GCA
[ENA]
¡û
>W1710075424
BCZT01000030
Gammaproteobacteria
Shewanella algae JCM 21037 = NBRC 103173 [BCZT]
55041
54968
-
Cys
GCA
[ENA]
¡û
>W1710460125
FKJK01000001
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
468489
468416
-
Cys
GCA
[ENA]
¡û
>W1710460127
FKJK01000001
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
467449
467376
-
Cys
GCA
[ENA]
¡û
>W1710460130
FKJK01000001
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
186613
186540
-
Cys
GCA
[ENA]
¡û
>W1710692443
JZWJ01000034
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
470
543
+
Cys
GCA
[ENA]
¡û
>W1710692484
JZWJ01000130
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
39730
39657
-
Cys
GCA
[ENA]
¡û
>W1710706624
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
3709860
3709933
+
Cys
GCA
[ENA]
¡û
>W1710706631
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
4165709
4165782
+
Cys
GCA
[ENA]
¡û
>W1710744042
LGYY01000177
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
22421
22494
+
Cys
GCA
[ENA]
¡û
>W1710744061
LGYY01000213
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
3969
4042
+
Cys
GCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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