tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.780764 (54 seq.)
>W131063639 ANKZ01000004 Gammaproteobacteria Spiribacter salinus M19-40 [ANKZ] 411 338 - Gly TCC [ENA] ¡û
>W1711373540 MDVM01000011 Gammaproteobacteria Gammaproteobacteria bacterium 2W06 [MDVM] 186 113 - Gly TCC [ENA] ¡û
>WENV180053690 MPLV02036398 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 801 874 + Gly TCC [ENA] ¢þ
>WENV180059520 MPLX02116210 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 352 279 - Gly TCC [ENA] ¢þ
>WENV180065857 MPLY02092299 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 22913 22986 + Gly TCC [ENA] ¢þ
>WENV180070042 MPLZ02145614 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 13969 14042 + Gly TCC [ENA] ¢þ
>WENV180074993 MPMA02181303 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 877 804 - Gly TCC [ENA] ¢þ
>WENV180077508 MPMB02053700 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 352 279 - Gly TCC [ENA] ¢þ
>WENV180090416 MPMF02138569 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 488 561 + Gly TCC [ENA] ¢þ
>WENV180091638 MPMF02209174 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 352 279 - Gly TCC [ENA] ¢þ
>W141022616 AJUE01000025 Gammaproteobacteria Ectothiorhodospira haloalkaliphila ATCC 51935 [AJUE] 31280 31353 + Gly TCC [ENA] ¡û
>WENV180291364 OBIV01045401 [OBIV] soil metagenome; Clay 433 360 - Gly TCC [ENA] ¢þ
>WENV181162511 OEIO01000173 [OEIO] marine metagenome; sea ice 7635 7562 - Gly TCC [ENA] ¢þ
>WENV181314005 OFJI01005338 [OFJI] marine metagenome; sea ice 271 198 - Gly TCC [ENA] ¢þ
>WENV181323101 OFKW01006234 [OFKW] marine metagenome; sea ice 177 104 - Gly TCC [ENA] ¢þ
>WENV181323748 OFKZ01002263 [OFKZ] marine metagenome; sea ice 1040 967 - Gly TCC [ENA] ¢þ
>WENV183617131 OOEE01067195 [OOEE] marine metagenome; sea ice 179 252 + Gly TCC [ENA] ¢þ
>WENV183618043 OOFL01009153 [OOFL] marine metagenome; seawater 401 328 - Gly TCC [ENA] ¢þ
>WENV183618141 OOFN01001652 [OOFN] marine metagenome; seawater 174 247 + Gly TCC [ENA] ¢þ
>WENV183623164 OOFX01022176 [OOFX] marine metagenome; sea ice 236 163 - Gly TCC [ENA] ¢þ
>WENV183625674 OOGG01007686 [OOGG] marine metagenome; sea ice 338 265 - Gly TCC [ENA] ¢þ
>WENV183628799 OOGO01026640 [OOGO] marine metagenome; sea ice 229 156 - Gly TCC [ENA] ¢þ
>WENV183630705 OOGU01000716 [OOGU] marine metagenome; sea ice 938 1011 + Gly TCC [ENA] ¢þ
>ENV08001708 ABNY01042488 saltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA 34 107 + Gly TCC [ENA] ¡û
>WENV183806538 PVBE011126390 [PVBE] marine metagenome; water 4823 4896 + Gly TCC [ENA] ¢þ
>WENV183811000 PVBE011536842 [PVBE] marine metagenome; water 1 74 + Gly TCC [ENA] ¢þ
>WENV170171509 CEOQ01059497 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 722 795 + Gly TCC [ENA] ¢þ
>WENV170227125 CEQF01048229 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 584 511 - Gly TCC [ENA] ¢þ
>WENV170231551 CEQH01216018 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 99 172 + Gly TCC [ENA] ¢þ
>WENV170270931 CERI01169776 [CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 558 485 - Gly TCC [ENA] ¢þ
>WENV170297953 CESF01027395 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1367 1294 - Gly TCC [ENA] ¢þ
>WENV170321241 CESR01040395 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 18052 17979 - Gly TCC [ENA] ¢þ
>WENV170336352 CETA01005360 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2295 2368 + Gly TCC [ENA] ¢þ
>WENV170378962 CETV01070245 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 662 735 + Gly TCC [ENA] ¢þ
>WENV170387941 CETZ01027921 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 579 652 + Gly TCC [ENA] ¢þ
>WENV170478825 CEVK01098656 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 328 401 + Gly TCC [ENA] ¢þ
>WENV170486882 CEVO01005297 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 798 725 - Gly TCC [ENA] ¢þ
>WENV170536507 CEWP01199425 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 28 101 + Gly TCC [ENA] ¢þ
>WENV170614590 FUWD012837866 [FUWD] metagenome; unknown 4815 4888 + Gly TCC [ENA] ¢þ
>WENV170683539 LFIK01015124 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 5289 5362 + Gly TCC [ENA] ¢þ
>WENV170701149 LKGT01003805 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 10896 10969 + Gly TCC [ENA] ¢þ
>WENV170800913 MDSV01238266 [MDSV] marine metagenome; seawater 80 7 - Gly TCC [ENA] ¢þ
>WENV170857486 MDTB01009428 [MDTB] marine metagenome; seawater 92255 92182 - Gly TCC [ENA] ¢þ
>WENV170946127 MDUQ01021209 [MDUQ] marine metagenome; 100 m water sample from station 6 527 454 - Gly TCC [ENA] ¢þ
>WENV170946228 MDUR01000857 [MDUR] marine metagenome; 125 m water sample from station 6 2471 2398 - Gly TCC [ENA] ¢þ
>C141004260 CP005990 Gammaproteobacteria Spiribacter curvatus UAH-SP71 [CP005990] 1681609 1681536 - Gly TCC [Ensembl] ¡û
>SRA1011394 SRR020492.393166 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 99 26 - Gly TCC [SRA]
>SRA1011471 SRR020492.422870 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 127 200 + Gly TCC [SRA]
>C161005785 CP007268 Gammaproteobacteria Ectothiorhodospira haloalkaliphila A [CP007268] 2482998 2482925 - Gly TCC - ¡û
>C161038414 CP011994 Gammaproteobacteria Ectothiorhodospira sp. BSL-9 [CP011994] 1696474 1696547 + Gly TCC [Ensembl] ¡û
>C161095359 CP016268 Gammaproteobacteria Woeseia oceani XK5 [CP016268] 1136635 1136708 + Gly TCC [Ensembl] ¡û
>C131016232 CP005963 Gammaproteobacteria Spiribacter salinus M19-40 [CP005963] 1541195 1541122 - Gly TCC [Ensembl] ¡û
>W1710543505 FOAA01000003 Gammaproteobacteria Ectothiorhodospira marina [FOAA] 33869 33796 - Gly TCC [ENA] ¡û
>W1710549094 FOEG01000005 Gammaproteobacteria Aquisalimonas asiatica [FOEG] 217005 217078 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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