tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.785937 (39 seq.)
>W131046037 AMSA01000032 Betaproteobacteria Herbaspirillum rubrisubalbicans Os45 [AMSA] 5650 5723 + Gly CCC [ENA] ¡û
>W131046092 AMSB01000038 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 21239 21166 - Gly CCC [ENA] ¡û
>W131062293 ANJR01000025 Betaproteobacteria Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] 1149846 1149773 - Gly CCC [ENA] ¡û
>W1711430695 MIJG01000001 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 657119 657192 + Gly CCC [ENA] ¡û
>W1711765118 MUXB01000111 Betaproteobacteria Herbaspirillum sp. VT-16-41 [MUXB] 16069 16142 + Gly CCC [ENA] ¡û
>W1712110328 NJGV01000020 Betaproteobacteria Herbaspirillum aquaticum [NJGV] 121340 121413 + Gly CCC [ENA] ¡û
>C171021249 CP013136 Betaproteobacteria Herbaspirillum seropedicae AU14040 [CP013136] 530623 530550 - Gly CCC - ¡û
>W141223414 BADF01000904 Betaproteobacteria Herbaspirillum sp. B39 [BADF] 14024 13951 - Gly CCC [ENA] ¡û
>W141223496 BADI01000435 Betaproteobacteria Herbaspirillum sp. B65 [BADI] 6334 6407 + Gly CCC [ENA] ¡û
>W141223532 BADJ01000668 Betaproteobacteria Herbaspirillum sp. B501 [BADJ] 2636 2563 - Gly CCC [ENA] ¡û
>WENV183727318 PJTO01026775 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 367 294 - Gly CCC [ENA] ¢þ
>WENV183727949 PJTP01008857 [PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment 858 785 - Gly CCC [ENA] ¢þ
>WENV183734949 PJUA01000217 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 16309 16382 + Gly CCC [ENA] ¢þ
>WENV183735691 PJUB01000641 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 3652 3725 + Gly CCC [ENA] ¢þ
>WENV183736414 PJUC01002427 [PJUC] soil metagenome; Soil enriched on filter paper 2807 2734 - Gly CCC [ENA] ¢þ
>WENV183738342 PJUD01170012 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 227 154 - Gly CCC [ENA] ¢þ
>WENV183743607 PJUJ01009848 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 274 201 - Gly CCC [ENA] ¢þ
>WENV183744380 PJUK01014193 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 91 18 - Gly CCC [ENA] ¢þ
>ENV08001424 ABMZ01008614 fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease 89 16 - Gly CCC [ENA] ¡û
>ENV08001451 ABNA01074026 fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling 75 2 - Gly CCC [ENA] ¡û
>ENV08001493 ABNE01014461 fish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling 3 76 + Gly CCC [ENA] ¡û
>WENV170165621 CEON01200319 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 86 13 - Gly CCC [ENA] ¢þ
>WENV170201722 CEPQ01047566 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5267 5340 + Gly CCC [ENA] ¢þ
>C191029380 CP024996 Betaproteobacteria Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] 569060 568987 - Gly CCC - ¡û
>C191124276 CP034395 Betaproteobacteria Herbaspirillum seropedicae AU13965 [CP034395] 526883 526810 - Gly CCC - ¡û
>C191156667 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 635281 635208 - Gly CCC - ¡û
>W1910577880 JUGD01000044 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 513 586 + Gly CCC [ENA] ¡û
>W1910578321 JWJC01000027 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 76711 76784 + Gly CCC [ENA] ¡û
>SRA1001517 SRR001067.66983 Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155) 89 16 - Gly CCC [SRA]
>SRA1001520 SRR001068.6290 Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156) 75 2 - Gly CCC [SRA]
>SRA1001592 SRR001072.67487 Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling (SRP000160) 3 76 + Gly CCC [SRA]
>W1810194026 PKOI01000002 Betaproteobacteria Herbaspirillum sp. BH-1 [PKOI] 16228 16301 + Gly CCC [ENA] ¡û
>C151087612 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 540879 540806 - Gly CCC [Ensembl] ¡û
>C10107845 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 540880 540807 - Gly CCC [Ensembl] ¡û
>C161060485 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 565153 565080 - Gly CCC [Ensembl] ¡û
>W121068684 AJVC01000001 Betaproteobacteria Herbaspirillum sp. GW103 [AJVC] 17002 16929 - Gly CCC [ENA] ¡û
>W121085179 AKJA01000116 Betaproteobacteria Herbaspirillum sp. YR522 [AKJA] 18404 18477 + Gly CCC [ENA] ¡û
>W1610071865 BCUJ01000036 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 15235 15162 - Gly CCC [ENA] ¡û
>W1710069067 BCUJ01000036 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 15235 15162 - Gly CCC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK