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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.80524 (3 seq.)
>W1711406131
MGFC01000014
Unclassified
Candidatus Uhrbacteria bacterium RIFOXYB2_FULL_41_18 [MGFC]
46286
46198
-
Ser
TGA
[ENA]
¡û
>W1511604391
LBYS01000048
Unclassified
Candidatus Uhrbacteria bacterium GW2011_GWF2_40_263 bacterium GW2011_GWF2_40_263 [LBYS]
8030
8118
+
Ser
TGA
[ENA]
¡û
>W1511604739
LBZG01000002
Unclassified
Candidatus Uhrbacteria bacterium GW2011_GWE2_40_58 bacterium GW2011_GWE2_40_58 [LBZG]
15035
15123
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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