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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.80925 (67 seq.)
>W1710809589
LKEQ01000005
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
77107
77190
+
Leu
CAA
[ENA]
¡û
>W1711055041
LRUH01000015
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
770
687
-
Leu
CAA
[ENA]
¡û
>W1711088437
LSYX01000072
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
1639
1556
-
Leu
CAA
[ENA]
¡û
>W1711088476
LSYY01000115
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
3383
3466
+
Leu
CAA
[ENA]
¡û
>W1711258825
LYUV01000032
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
12520
12437
-
Leu
CAA
[ENA]
¡û
>W1711258858
LYUW01000031
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
12502
12419
-
Leu
CAA
[ENA]
¡û
>W1711258894
LYUX01000033
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
12520
12437
-
Leu
CAA
[ENA]
¡û
>W1711258922
LYUY01000021
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
1758
1841
+
Leu
CAA
[ENA]
¡û
>W1711745704
MUJL01000043
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
1832
1749
-
Leu
CAA
[ENA]
¡û
>W1711745757
MUJM01000125
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
1832
1749
-
Leu
CAA
[ENA]
¡û
>W1712108418
NJBR01000003
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
34732
34650
-
Leu
CAA
[ENA]
¡û
>W131052805
AMZJ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
26362
26279
-
Leu
CAA
[ENA]
¡û
>W131242629
CAOH01000016
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
11847
11764
-
Leu
CAA
[ENA]
¡û
>W131243107
CAOU02000018
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
13476
13393
-
Leu
CAA
[ENA]
¡û
>C026824
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
338408
338490
+
Leu
CAA
[Ensembl]
¡û
>C026859
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
396034
396116
+
Leu
CAA
[Ensembl]
¡û
>w016798
AAQP01000051
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
1745
1832
+
Leu
CAA
[ENA]
¡û
>W141001019
ADHD01000090
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
534
616
+
Leu
CAA
[ENA]
¡û
>w005407
AAGB01000052
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae [AAGB]
5251
5164
-
Leu
CAA
[ENA]
¡û
>W141065623
AQQE01000028
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
11595
11678
+
Leu
CAA
[ENA]
¡û
>WENV181405239
OGCC01000448
[OGCC] insect metagenome; haemolymph
99
182
+
Leu
CAA
[ENA]
¢þ
>WENV181405275
OGCD01000008
[OGCD] insect metagenome; haemolymph
10408
10491
+
Leu
CAA
[ENA]
¢þ
>W141145085
AWUH01000098
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
8597
8680
+
Leu
CAA
[ENA]
¡û
>W141240216
CAGB01000078
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
1157
1074
-
Leu
CAA
[ENA]
¡û
>C08011425
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
133777
133694
-
Leu
CAA
[Ensembl]
¡û
>C191074324
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
668678
668761
+
Leu
CAA
-
¡û
>C191123105
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
808628
808711
+
Leu
CAA
-
¡û
>C191123151
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
823249
823166
-
Leu
CAA
-
¡û
>C191123185
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
823252
823169
-
Leu
CAA
-
¡û
>C191188729
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
824212
824129
-
Leu
CAA
-
¡û
>W09113857
ABZA01000002
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
228327
228410
+
Leu
CAA
[ENA]
¡û
>W09121825
ACFP01000243
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
7097
7180
+
Leu
CAA
[ENA]
¡û
>W141812270
JQAM01000006
Alphaproteobacteria
Wolbachia pipientis [JQAM]
30766
30849
+
Leu
CAA
[ENA]
¡û
>W1910213473
FMKF01000124
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
607
524
-
Leu
CAA
[ENA]
¡û
>C09111281
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
464324
464241
-
Leu
CAA
[Ensembl]
¡û
>W1910753977
MKIF01000187
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
1699
1782
+
Leu
CAA
[ENA]
¡û
>W1910759026
MLZJ01000059
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
795
712
-
Leu
CAA
[ENA]
¡û
>W1910760272
MNCG01000058
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
795
712
-
Leu
CAA
[ENA]
¡û
>W1910794354
MRWX01000008
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
21302
21385
+
Leu
CAA
[ENA]
¡û
>W1910802352
MSYL01000118
Alphaproteobacteria
Wolbachia sp. wRi_2 [MSYL]
925
1008
+
Leu
CAA
[ENA]
¡û
>W1911239463
NSDR01000082
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
6942
7025
+
Leu
CAA
[ENA]
¡û
>W1911239507
NSDS01000101
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
11886
11969
+
Leu
CAA
[ENA]
¡û
>W1911239513
NSDT01000003
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
7007
7090
+
Leu
CAA
[ENA]
¡û
>W1911281104
NTHL01000044
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
4591
4674
+
Leu
CAA
[ENA]
¡û
>W1911412161
NWVH01000063
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
6565
6482
-
Leu
CAA
[ENA]
¡û
>W1911412192
NWVI01000055
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
3029
2946
-
Leu
CAA
[ENA]
¡û
>W1911412232
NWVJ01000045
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
21392
21309
-
Leu
CAA
[ENA]
¡û
>W1911412278
NWVK01000042
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
21552
21469
-
Leu
CAA
[ENA]
¡û
>W1911545115
OUNE01000074
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
2489
2406
-
Leu
CAA
[ENA]
¡û
>W1911545151
OUNF01000214
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus floccissimus WBAF (OUNF) of Aleurodicus floccissimus WBAF [OUNF]
1748
1831
+
Leu
CAA
[ENA]
¡û
>W1810758351
QPIP01000051
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
8329
8246
-
Leu
CAA
[ENA]
¡û
>C151001121
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
162591
162674
+
Leu
CAA
[Ensembl]
¡û
>C151102202
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
375331
375414
+
Leu
CAA
[Ensembl]
¡û
>W1510562593
CTEH01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
419802
419885
+
Leu
CAA
[ENA]
¡û
>W1511536216
JYPC01000020
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
3842
3925
+
Leu
CAA
[ENA]
¡û
>W11145932
AERW01000038
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
747
664
-
Leu
CAA
[ENA]
¡û
>W11185725
CACK01000064
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
8168
8251
+
Leu
CAA
[ENA]
¡û
>C131009125
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
1030237
1030320
+
Leu
CAA
[Ensembl]
¡û
>C131009167
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
589022
588939
-
Leu
CAA
[Ensembl]
¡û
>W1610673695
LKEQ01000005
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
77107
77190
+
Leu
CAA
[ENA]
¡û
>W1610896087
LRUH01000015
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
770
687
-
Leu
CAA
[ENA]
¡û
>W1610922976
LSYX01000072
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
1639
1556
-
Leu
CAA
[ENA]
¡û
>W1610923015
LSYY01000115
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
3383
3466
+
Leu
CAA
[ENA]
¡û
>W1611021090
LYUV01000032
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
12520
12437
-
Leu
CAA
[ENA]
¡û
>W1611021123
LYUW01000031
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
12502
12419
-
Leu
CAA
[ENA]
¡û
>W1611021159
LYUX01000033
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
12520
12437
-
Leu
CAA
[ENA]
¡û
>W1611021187
LYUY01000021
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
1758
1841
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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