tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8301 (28 seq.)
>W131046007 AMSA01000003 Betaproteobacteria Herbaspirillum rubrisubalbicans Os45 [AMSA] 494003 493910 - Ser GCT [ENA] ¡û
>W131046049 AMSB01000001 Betaproteobacteria Herbaspirillum rubrisubalbicans Os34 [AMSB] 506059 505966 - Ser GCT [ENA] ¡û
>W131062291 ANJR01000025 Betaproteobacteria Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] 228677 228770 + Ser GCT [ENA] ¡û
>W1711430746 MIJG01000008 Betaproteobacteria Herbaspirillum camelliae WT00C [MIJG] 329711 329618 - Ser GCT [ENA] ¡û
>W1711765128 MUXB01000114 Betaproteobacteria Herbaspirillum sp. VT-16-41 [MUXB] 229187 229094 - Ser GCT [ENA] ¡û
>W1712110240 NJGU01000001 Betaproteobacteria Herbaspirillum robiniae HZ10 [NJGU] 448341 448434 + Ser GCT [ENA] ¡û
>W1712110311 NJGV01000002 Betaproteobacteria Herbaspirillum aquaticum [NJGV] 239509 239416 - Ser GCT [ENA] ¡û
>C171021240 CP013136 Betaproteobacteria Herbaspirillum seropedicae AU14040 [CP013136] 2381421 2381328 - Ser GCT - ¡û
>C171085354 CP018845 Betaproteobacteria Herbaspirillum robiniae AA6 [CP018845] 1268870 1268963 + Ser GCT - ¡û
>W141003816 AEEC02000007 Betaproteobacteria Herbaspirillum frisingense GSF30 [AEEC] 71274 71367 + Ser GCT [ENA] ¡û
>WENV183730177 PJTR01002096 [PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment 260 353 + Ser GCT [ENA] ¢þ
>WENV183735083 PJUA01000809 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 10202 10109 - Ser GCT [ENA] ¢þ
>WENV183735791 PJUB01002603 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 2738 2645 - Ser GCT [ENA] ¢þ
>WENV170165398 CEON01118600 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 361 454 + Ser GCT [ENA] ¢þ
>WENV170201742 CEPQ01048467 [CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2314 2407 + Ser GCT [ENA] ¢þ
>WENV170840725 MDSZ01209831 [MDSZ] marine metagenome; seawater 358 451 + Ser GCT [ENA] ¢þ
>C191029371 CP024996 Betaproteobacteria Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] 2369084 2368991 - Ser GCT - ¡û
>C191124268 CP034395 Betaproteobacteria Herbaspirillum seropedicae AU13965 [CP034395] 2264179 2264086 - Ser GCT - ¡û
>C191156658 CP037993 Betaproteobacteria Herbaspirillum huttiense NFYY 53159 [CP037993] 2458920 2458827 - Ser GCT - ¡û
>W1910577836 JUGD01000003 Betaproteobacteria Herbaspirillum rubrisubalbicans Os38 [JUGD] 136641 136734 + Ser GCT [ENA] ¡û
>W1910578292 JWJC01000006 Betaproteobacteria Herbaspirillum rubrisubalbicans Os44 [JWJC] 290042 290135 + Ser GCT [ENA] ¡û
>W1810194036 PKOI01000007 Betaproteobacteria Herbaspirillum sp. BH-1 [PKOI] 129386 129479 + Ser GCT [ENA] ¡û
>C151087603 CP011930 Betaproteobacteria Herbaspirillum seropedicae Z67 [CP011930] 2406078 2405985 - Ser GCT [Ensembl] ¡û
>C10107836 CP002039 Betaproteobacteria Herbaspirillum seropedicae SmR1 [CP002039] 2406249 2406156 - Ser GCT [Ensembl] ¡û
>C161060476 CP013737 Betaproteobacteria Herbaspirillum rubrisubalbicans M1 [CP013737] 2315557 2315464 - Ser GCT [Ensembl] ¡û
>W1610071864 BCUJ01000035 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 4636 4543 - Ser GCT [ENA] ¡û
>W121068713 AJVC01000003 Betaproteobacteria Herbaspirillum sp. GW103 [AJVC] 885107 885014 - Ser GCT [ENA] ¡û
>W1710069066 BCUJ01000035 Betaproteobacteria Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] 4636 4543 - Ser GCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK