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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.87589 (178 seq.)
>W1711117583
LUDG01000006
Bacteroidota
Riemerella anatipestifer [LUDG]
47208
47121
-
Ser
TGA
[ENA]
¡û
>W1711117619
LUDH01000005
Bacteroidota
Riemerella anatipestifer [LUDH]
68070
68157
+
Ser
TGA
[ENA]
¡û
>W1711117623
LUDI01000001
Bacteroidota
Riemerella anatipestifer [LUDI]
272349
272436
+
Ser
TGA
[ENA]
¡û
>W1711117685
LUDJ01000006
Bacteroidota
Riemerella anatipestifer [LUDJ]
70650
70737
+
Ser
TGA
[ENA]
¡û
>W1711117727
LUDK01000005
Bacteroidota
Riemerella anatipestifer [LUDK]
70442
70529
+
Ser
TGA
[ENA]
¡û
>W1711117762
LUDL01000006
Bacteroidota
Riemerella anatipestifer [LUDL]
70676
70763
+
Ser
TGA
[ENA]
¡û
>W1711117809
LUDM01000007
Bacteroidota
Riemerella anatipestifer [LUDM]
70443
70530
+
Ser
TGA
[ENA]
¡û
>W1711117845
LUDN01000007
Bacteroidota
Riemerella anatipestifer [LUDN]
70441
70528
+
Ser
TGA
[ENA]
¡û
>W1711117881
LUDO01000005
Bacteroidota
Riemerella anatipestifer [LUDO]
70439
70526
+
Ser
TGA
[ENA]
¡û
>W1711117916
LUDP01000007
Bacteroidota
Riemerella anatipestifer [LUDP]
60375
60462
+
Ser
TGA
[ENA]
¡û
>W1711117953
LUDQ01000005
Bacteroidota
Riemerella anatipestifer [LUDQ]
96655
96568
-
Ser
TGA
[ENA]
¡û
>W1711117971
LUDR01000007
Bacteroidota
Riemerella anatipestifer [LUDR]
104214
104301
+
Ser
TGA
[ENA]
¡û
>W1711118021
LUDS01000006
Bacteroidota
Riemerella anatipestifer [LUDS]
70441
70528
+
Ser
TGA
[ENA]
¡û
>W1711118097
LUDU01000005
Bacteroidota
Riemerella anatipestifer [LUDU]
95914
95827
-
Ser
TGA
[ENA]
¡û
>W1711118133
LUDV01000006
Bacteroidota
Riemerella anatipestifer [LUDV]
45853
45766
-
Ser
TGA
[ENA]
¡û
>W1711386332
MEFE01000103
Bacteroidota
Sphingobacteriales bacterium SCN 48-20 [MEFE]
7524
7435
-
Ser
TGA
[ENA]
¡û
>W1711503801
MKTY01000016
Bacteroidota
Sphingobacteriales bacterium 46-32 [MKTY]
49583
49498
-
Ser
TGA
[ENA]
¡û
>W1711503902
MKUA01000028
Bacteroidota
Sphingobacteriales bacterium 48-107 [MKUA]
148369
148458
+
Ser
TGA
[ENA]
¡û
>C171015058
CP011859
Bacteroidota
Riemerella anatipestifer HXb2 [CP011859]
2320358
2320271
-
Ser
TGA
-
¡û
>W131059224
ANGF01000030
Bacteroidota
Riemerella anatipestifer RA-SG [ANGF]
5336
5249
-
Ser
TGA
[ENA]
¡û
>W131164165
ARAI01000023
Bacteroidota
Capnocytophaga cynodegmi DSM 19736 [ARAI]
17024
16937
-
Ser
TGA
[ENA]
¡û
>W131218982
ATYE01000002
Bacteroidota
Asinibacterium sp. OR43 OR43 [ATYE]
409498
409413
-
Ser
TGA
[ENA]
¡û
>W131225624
AUDS01000019
Bacteroidota
Terrimonas ferruginea DSM 30193 [AUDS]
46382
46467
+
Ser
TGA
[ENA]
¡û
>WENV180591561
OCOV01046619
[OCOV] marine metagenome; ENVO:01000301
315
402
+
Ser
TGA
[ENA]
¢þ
>WENV180698206
ODDE01085133
[ODDE] human metagenome; G_DNA_Supragingival plaque
131
46
-
Ser
TGA
[ENA]
¢þ
>WENV180705388
ODEJ01003882
[ODEJ] human metagenome; G_DNA_Tongue dorsum
283
198
-
Ser
TGA
[ENA]
¢þ
>WENV180708359
ODFJ01001149
[ODFJ] human metagenome; G_DNA_Tongue dorsum
9100
9015
-
Ser
TGA
[ENA]
¢þ
>WENV180717625
ODGE01000235
[ODGE] human metagenome; G_DNA_Buccal mucosa
327
412
+
Ser
TGA
[ENA]
¢þ
>WENV180722579
ODGM01003186
[ODGM] human metagenome; G_DNA_Palatine Tonsils
115
200
+
Ser
TGA
[ENA]
¢þ
>WENV180727932
ODGU01016717
[ODGU] human metagenome; G_DNA_Supragingival plaque
2732
2817
+
Ser
TGA
[ENA]
¢þ
>WENV180728356
ODGU01042107
[ODGU] human metagenome; G_DNA_Supragingival plaque
961
876
-
Ser
TGA
[ENA]
¢þ
>WENV180736141
ODHB01006157
[ODHB] human metagenome; G_DNA_Supragingival plaque
2020
2105
+
Ser
TGA
[ENA]
¢þ
>WENV180738579
ODHD01000117
[ODHD] human metagenome; G_DNA_Supragingival plaque
27772
27687
-
Ser
TGA
[ENA]
¢þ
>WENV180751079
ODHS01020368
[ODHS] human metagenome; G_DNA_Supragingival plaque
710
795
+
Ser
TGA
[ENA]
¢þ
>WENV180751160
ODHS01024275
[ODHS] human metagenome; G_DNA_Supragingival plaque
1298
1213
-
Ser
TGA
[ENA]
¢þ
>WENV180754745
ODHU01000579
[ODHU] human metagenome; G_DNA_Supragingival plaque
178
93
-
Ser
TGA
[ENA]
¢þ
>WENV180759409
ODHY01010108
[ODHY] human metagenome; G_DNA_Buccal mucosa
678
593
-
Ser
TGA
[ENA]
¢þ
>WENV180769105
ODIG01034052
[ODIG] human metagenome; G_DNA_Tongue dorsum
1004
919
-
Ser
TGA
[ENA]
¢þ
>WENV180775673
ODIK01002280
[ODIK] human metagenome; G_DNA_Tongue dorsum
296
211
-
Ser
TGA
[ENA]
¢þ
>WENV180777725
ODIL01065273
[ODIL] human metagenome; G_DNA_Supragingival plaque
234
149
-
Ser
TGA
[ENA]
¢þ
>WENV180781445
ODIP01000062
[ODIP] human metagenome; G_DNA_Supragingival plaque
126
41
-
Ser
TGA
[ENA]
¢þ
>WENV180783896
ODIQ01044344
[ODIQ] human metagenome; G_DNA_Tongue dorsum
383
298
-
Ser
TGA
[ENA]
¢þ
>WENV180790191
ODIT01005069
[ODIT] human metagenome; G_DNA_Tongue dorsum
239
154
-
Ser
TGA
[ENA]
¢þ
>WENV180793634
ODIW01046321
[ODIW] human metagenome; G_DNA_Tongue dorsum
326
241
-
Ser
TGA
[ENA]
¢þ
>WENV180796187
ODJB01001822
[ODJB] human metagenome; G_DNA_Supragingival plaque
1437
1522
+
Ser
TGA
[ENA]
¢þ
>WENV180801545
ODJD01051359
[ODJD] human metagenome; G_DNA_Supragingival plaque
301
216
-
Ser
TGA
[ENA]
¢þ
>WENV180805299
ODJG01150910
[ODJG] human metagenome; G_DNA_Supragingival plaque
188
103
-
Ser
TGA
[ENA]
¢þ
>WENV180805741
ODJH01000162
[ODJH] human metagenome; G_DNA_Tongue dorsum
53519
53604
+
Ser
TGA
[ENA]
¢þ
>WENV180807783
ODJI01010772
[ODJI] human metagenome; G_DNA_Tongue dorsum
591
676
+
Ser
TGA
[ENA]
¢þ
>WENV180811032
ODJM01011336
[ODJM] human metagenome; G_DNA_Buccal mucosa
498
583
+
Ser
TGA
[ENA]
¢þ
>WENV180813336
ODJO01000378
[ODJO] human metagenome; G_DNA_Supragingival plaque
32456
32541
+
Ser
TGA
[ENA]
¢þ
>WENV180824331
ODJX01003542
[ODJX] human metagenome; G_DNA_Supragingival plaque
317
232
-
Ser
TGA
[ENA]
¢þ
>WENV180830210
ODKB01000836
[ODKB] human metagenome; G_DNA_Tongue dorsum
4467
4552
+
Ser
TGA
[ENA]
¢þ
>WENV180832001
ODKC01000334
[ODKC] human metagenome; G_DNA_Supragingival plaque
34386
34301
-
Ser
TGA
[ENA]
¢þ
>WENV180833774
ODKD01000228
[ODKD] human metagenome; G_DNA_Supragingival plaque
537
452
-
Ser
TGA
[ENA]
¢þ
>WENV180835927
ODKE01021669
[ODKE] human metagenome; G_DNA_Supragingival plaque
831
916
+
Ser
TGA
[ENA]
¢þ
>WENV180844031
ODKN01025767
[ODKN] human metagenome; G_DNA_Supragingival plaque
1087
1002
-
Ser
TGA
[ENA]
¢þ
>WENV180846740
ODKT01021462
[ODKT] human metagenome; G_DNA_Supragingival plaque
97
12
-
Ser
TGA
[ENA]
¢þ
>WENV180852528
ODKW01001680
[ODKW] human metagenome; G_DNA_Tongue dorsum
379
294
-
Ser
TGA
[ENA]
¢þ
>WENV180855118
ODKX01032581
[ODKX] human metagenome; G_DNA_Tongue dorsum
364
279
-
Ser
TGA
[ENA]
¢þ
>WENV180858509
ODLC01009063
[ODLC] human metagenome; G_DNA_Tongue dorsum
1383
1468
+
Ser
TGA
[ENA]
¢þ
>WENV180860462
ODLD01093384
[ODLD] human metagenome; G_DNA_Supragingival plaque
94
179
+
Ser
TGA
[ENA]
¢þ
>WENV180861914
ODLE01018053
[ODLE] human metagenome; G_DNA_Tongue dorsum
281
196
-
Ser
TGA
[ENA]
¢þ
>WENV180863284
ODLG01041705
[ODLG] human metagenome; G_DNA_Buccal mucosa
14
99
+
Ser
TGA
[ENA]
¢þ
>WENV180863798
ODLH01002465
[ODLH] human metagenome; G_DNA_Tongue dorsum
95
10
-
Ser
TGA
[ENA]
¢þ
>WENV180873342
ODLP01003833
[ODLP] human metagenome; G_DNA_Tongue dorsum
739
654
-
Ser
TGA
[ENA]
¢þ
>WENV180877971
ODLV01007235
[ODLV] human metagenome; G_DNA_Tongue dorsum
2710
2795
+
Ser
TGA
[ENA]
¢þ
>WENV180889795
ODMN01154390
[ODMN] human metagenome; G_DNA_Supragingival plaque
194
109
-
Ser
TGA
[ENA]
¢þ
>WENV180900797
ODOJ01010108
[ODOJ] human metagenome; G_DNA_Tongue dorsum
556
471
-
Ser
TGA
[ENA]
¢þ
>WENV180916668
ODTD01000446
[ODTD] human metagenome; G_DNA_Tongue dorsum
21727
21812
+
Ser
TGA
[ENA]
¢þ
>WENV180922701
ODTJ01008632
[ODTJ] human metagenome; G_DNA_Supragingival plaque
1514
1599
+
Ser
TGA
[ENA]
¢þ
>WENV180925054
ODTK01034213
[ODTK] human metagenome; G_DNA_Supragingival plaque
643
728
+
Ser
TGA
[ENA]
¢þ
>WENV180927517
ODTM01000969
[ODTM] human metagenome; G_DNA_Supragingival plaque
8016
8101
+
Ser
TGA
[ENA]
¢þ
>WENV180927937
ODTM01007594
[ODTM] human metagenome; G_DNA_Supragingival plaque
416
331
-
Ser
TGA
[ENA]
¢þ
>WENV180932207
ODTP01030843
[ODTP] human metagenome; G_DNA_Tongue dorsum
128
43
-
Ser
TGA
[ENA]
¢þ
>WENV180935199
ODTS01105012
[ODTS] human metagenome; G_DNA_Subgingival plaque
139
54
-
Ser
TGA
[ENA]
¢þ
>WENV180939467
ODTX01040050
[ODTX] human metagenome; G_DNA_Supragingival plaque
1072
987
-
Ser
TGA
[ENA]
¢þ
>WENV180943991
ODUC01005611
[ODUC] human metagenome; G_DNA_Supragingival plaque
5466
5551
+
Ser
TGA
[ENA]
¢þ
>WENV180948094
ODUG01000258
[ODUG] human metagenome; G_DNA_Tongue dorsum
47173
47258
+
Ser
TGA
[ENA]
¢þ
>WENV180953860
ODUJ01000016
[ODUJ] human metagenome; G_DNA_Tongue dorsum
118456
118541
+
Ser
TGA
[ENA]
¢þ
>WENV180958723
ODUL01026766
[ODUL] human metagenome; G_DNA_Supragingival plaque
393
308
-
Ser
TGA
[ENA]
¢þ
>WENV180960572
ODUM01066387
[ODUM] human metagenome; G_DNA_Tongue dorsum
285
200
-
Ser
TGA
[ENA]
¢þ
>WENV180973002
ODUW01000808
[ODUW] human metagenome; G_DNA_Supragingival plaque
2001
1916
-
Ser
TGA
[ENA]
¢þ
>WENV180976936
ODUY01354485
[ODUY] human metagenome; G_DNA_Supragingival plaque
72
157
+
Ser
TGA
[ENA]
¢þ
>WENV180977383
ODUZ01000529
[ODUZ] human metagenome; G_DNA_Tongue dorsum
222
137
-
Ser
TGA
[ENA]
¢þ
>WENV180979568
ODVC01000327
[ODVC] human metagenome; G_DNA_Attached/Keratinized gingiva
35901
35986
+
Ser
TGA
[ENA]
¢þ
>WENV180984095
ODVF01107885
[ODVF] human metagenome; G_DNA_Supragingival plaque
234
149
-
Ser
TGA
[ENA]
¢þ
>WENV180987238
ODVK01009438
[ODVK] human metagenome; G_DNA_Supragingival plaque
398
483
+
Ser
TGA
[ENA]
¢þ
>WENV180988627
ODVL01004190
[ODVL] human metagenome; G_DNA_Tongue dorsum
1268
1353
+
Ser
TGA
[ENA]
¢þ
>WENV181001695
ODVW01004760
[ODVW] human metagenome; G_DNA_Buccal mucosa
126
211
+
Ser
TGA
[ENA]
¢þ
>WENV181003473
ODVX01014136
[ODVX] human metagenome; G_DNA_Supragingival plaque
1981
1896
-
Ser
TGA
[ENA]
¢þ
>WENV181006533
ODWA01033197
[ODWA] human metagenome; G_DNA_Buccal mucosa
505
420
-
Ser
TGA
[ENA]
¢þ
>WENV181007704
ODWE01000486
[ODWE] human metagenome; G_DNA_Supragingival plaque
1070
985
-
Ser
TGA
[ENA]
¢þ
>WENV181008113
ODWE01002027
[ODWE] human metagenome; G_DNA_Supragingival plaque
3163
3248
+
Ser
TGA
[ENA]
¢þ
>WENV181009451
ODWE01073527
[ODWE] human metagenome; G_DNA_Supragingival plaque
416
331
-
Ser
TGA
[ENA]
¢þ
>WENV181017449
ODWR01079933
[ODWR] human metagenome; G_DNA_Tongue dorsum
200
115
-
Ser
TGA
[ENA]
¢þ
>WENV181019539
ODWU01005378
[ODWU] human metagenome; G_DNA_Supragingival plaque
1226
1141
-
Ser
TGA
[ENA]
¢þ
>WENV181029944
ODXF01012128
[ODXF] human metagenome; G_DNA_Supragingival plaque
1125
1210
+
Ser
TGA
[ENA]
¢þ
>WENV181041701
ODXS01031162
[ODXS] human metagenome; G_DNA_Tongue dorsum
621
706
+
Ser
TGA
[ENA]
¢þ
>WENV181043177
ODXU01064601
[ODXU] human metagenome; G_DNA_Buccal mucosa
226
311
+
Ser
TGA
[ENA]
¢þ
>WENV181043643
ODXV01000274
[ODXV] human metagenome; G_DNA_Tongue dorsum
19940
20025
+
Ser
TGA
[ENA]
¢þ
>WENV181049368
ODYD01000079
[ODYD] human metagenome; G_DNA_Supragingival plaque
43447
43532
+
Ser
TGA
[ENA]
¢þ
>WENV181070911
OEAE01027067
[OEAE] human metagenome; G_DNA_Supragingival plaque
257
172
-
Ser
TGA
[ENA]
¢þ
>WENV181077118
OEAP01026401
[OEAP] human metagenome; G_DNA_Supragingival plaque
1466
1381
-
Ser
TGA
[ENA]
¢þ
>WENV181077264
OEAP01036396
[OEAP] human metagenome; G_DNA_Supragingival plaque
119
34
-
Ser
TGA
[ENA]
¢þ
>WENV181084985
OEAX01000779
[OEAX] human metagenome; G_DNA_Tongue dorsum
13890
13975
+
Ser
TGA
[ENA]
¢þ
>WENV181086841
OEAY01004237
[OEAY] human metagenome; G_DNA_Tongue dorsum
3927
4012
+
Ser
TGA
[ENA]
¢þ
>WENV181091969
OEBC01159797
[OEBC] human metagenome; G_DNA_Supragingival plaque
276
361
+
Ser
TGA
[ENA]
¢þ
>WENV181097948
OECA01048088
[OECA] human metagenome; G_DNA_Tongue dorsum
441
356
-
Ser
TGA
[ENA]
¢þ
>WENV181108054
OEEI01071634
[OEEI] human metagenome; G_DNA_Supragingival plaque
178
93
-
Ser
TGA
[ENA]
¢þ
>WENV181108509
OEEJ01000036
[OEEJ] human metagenome; G_DNA_Tongue dorsum
107913
107998
+
Ser
TGA
[ENA]
¢þ
>WENV181113475
OEEL01031066
[OEEL] human metagenome; G_DNA_Tongue dorsum
428
343
-
Ser
TGA
[ENA]
¢þ
>WENV181115033
OEEO01015047
[OEEO] human metagenome; G_DNA_Supragingival plaque
910
825
-
Ser
TGA
[ENA]
¢þ
>WENV181119819
OEFJ01000140
[OEFJ] human metagenome; G_DNA_Attached/Keratinized gingiva
19397
19312
-
Ser
TGA
[ENA]
¢þ
>WENV181121194
OEFL01001264
[OEFL] human metagenome; G_DNA_Supragingival plaque
9159
9244
+
Ser
TGA
[ENA]
¢þ
>WENV181123990
OEFQ01003821
[OEFQ] human metagenome; G_DNA_Supragingival plaque
337
252
-
Ser
TGA
[ENA]
¢þ
>WENV181136021
OEGI01000258
[OEGI] human metagenome; G_DNA_Supragingival plaque
25138
25223
+
Ser
TGA
[ENA]
¢þ
>WENV181141835
OEGT01026373
[OEGT] human metagenome; G_DNA_Throat
113
28
-
Ser
TGA
[ENA]
¢þ
>WENV181143801
OEHM01011151
[OEHM] human metagenome; G_DNA_Supragingival plaque
1452
1537
+
Ser
TGA
[ENA]
¢þ
>WENV181150461
OEHW01002806
[OEHW] human metagenome; G_DNA_Tongue dorsum
9103
9188
+
Ser
TGA
[ENA]
¢þ
>WENV181152680
OEIA01003936
[OEIA] human metagenome; G_DNA_Supragingival plaque
291
206
-
Ser
TGA
[ENA]
¢þ
>WENV181156509
OEIE01024227
[OEIE] human metagenome; G_DNA_Supragingival plaque
289
204
-
Ser
TGA
[ENA]
¢þ
>WENV181158273
OEIH01000157
[OEIH] human metagenome; G_DNA_Supragingival plaque
12277
12192
-
Ser
TGA
[ENA]
¢þ
>WENV181159968
OEIK01001016
[OEIK] human metagenome; G_DNA_Supragingival plaque
1292
1207
-
Ser
TGA
[ENA]
¢þ
>WENV181178578
OEJT01000068
[OEJT] human metagenome; G_DNA_Supragingival plaque
42784
42869
+
Ser
TGA
[ENA]
¢þ
>WENV181181396
OEJU01032639
[OEJU] human metagenome; G_DNA_Supragingival plaque
268
183
-
Ser
TGA
[ENA]
¢þ
>WENV181308283
OFIS01002170
[OFIS] sludge metagenome; sludge
3728
3813
+
Ser
TGA
[ENA]
¢þ
>WENV181401588
OFTX01001218
[OFTX] sludge metagenome; sludge
1651
1566
-
Ser
TGA
[ENA]
¢þ
>WENV181402321
OFTY01000604
[OFTY] sludge metagenome; sludge
1870
1785
-
Ser
TGA
[ENA]
¢þ
>WENV181839893
OGVO01021157
[OGVO] freshwater metagenome; freshwater
585
500
-
Ser
TGA
[ENA]
¢þ
>WENV181843227
OGVU01003987
[OGVU] freshwater metagenome; freshwater
143
228
+
Ser
TGA
[ENA]
¢þ
>WENV181851302
OGWE01020688
[OGWE] freshwater metagenome; freshwater
335
420
+
Ser
TGA
[ENA]
¢þ
>WENV181854157
OGWJ01020419
[OGWJ] freshwater metagenome; freshwater
532
617
+
Ser
TGA
[ENA]
¢þ
>WENV181857435
OGWO01005120
[OGWO] freshwater metagenome; freshwater
664
579
-
Ser
TGA
[ENA]
¢þ
>W141220176
AZXP01000001
Bacteroidota
Asinibacterium sp. OR53 OR53 [AZXP]
2876382
2876469
+
Ser
TGA
[ENA]
¡û
>WENV183744765
PJUL01000200
[PJUL] feces metagenome; Chicken feces enriched on filter paper
27028
26943
-
Ser
TGA
[ENA]
¢þ
>WENV170010768
APMI01028299
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
9314
9401
+
Ser
TGA
[ENA]
¢þ
>WENV170593761
FUFK011000486
[FUFK] metagenome; unknown
258
173
-
Ser
TGA
[ENA]
¢þ
>C181063491
CP022378
Bacteroidota
Capnocytophaga cynodegmi G7591 [CP022378]
2196181
2196096
-
Ser
TGA
-
¡û
>C181063878
CP022387
Bacteroidota
Capnocytophaga stomatis H2177 [CP022387]
532682
532767
+
Ser
TGA
-
¡û
>C181226359
LT906475
Bacteroidota
Riemerella anatipestifer NCTC11014 [LT906475]
2092624
2092709
+
Ser
TGA
-
¡û
>C191185724
CP041029
Bacteroidota
Riemerella anatipestifer WJ4 [CP041029]
2222594
2222679
+
Ser
TGA
-
¡û
>W1911615651
PPEC01000007
Bacteroidota
Riemerella anatipestifer RA1 [PPEC]
4796
4881
+
Ser
TGA
[ENA]
¡û
>W1810191554
PKKR01000005
Bacteroidota
Riemerella anatipestifer 17CS0503 [PKKR]
143774
143689
-
Ser
TGA
[ENA]
¡û
>W1810583111
QEWX01000004
Bacteroidota
Riemerella anatipestifer RA2 [QEWX]
7281
7366
+
Ser
TGA
[ENA]
¡û
>C151010300
CP006649
Bacteroidota
Riemerella anatipestifer CH3 [CP006649]
344363
344276
-
Ser
TGA
[Ensembl]
¡û
>C151018464
CP007204
Bacteroidota
Riemerella anatipestifer Yb2 [CP007204]
2119416
2119503
+
Ser
TGA
-
¡û
>C151025738
CP007503
Bacteroidota
Riemerella anatipestifer 17 [CP007503]
2089584
2089671
+
Ser
TGA
[Ensembl]
¡û
>C151025778
CP007504
Bacteroidota
Riemerella anatipestifer 153 [CP007504]
2144520
2144607
+
Ser
TGA
[Ensembl]
¡û
>W1510019465
BBWV01000003
Bacteroidota
Flavihumibacter petaseus NBRC 106054 [BBWV]
691095
691010
-
Ser
TGA
[ENA]
¡û
>W1510076149
CDOD01000005
Bacteroidota
Capnocytophaga cynodegmi Ccyn2B [CDOD]
4518
4433
-
Ser
TGA
[ENA]
¡û
>W1510076225
CDOF01000038
Bacteroidota
Capnocytophaga cynodegmi Ccyn_ATCC49044 [CDOF]
16924
16837
-
Ser
TGA
[ENA]
¡û
>W1510076257
CDOG01000004
Bacteroidota
Capnocytophaga cynodegmi Ccy74 [CDOG]
20983
21070
+
Ser
TGA
[ENA]
¡û
>C11118451
CP002346
Bacteroidota
Riemerella anatipestifer ATCC 11845 = DSM 15868 [CP002346]
2091058
2091145
+
Ser
TGA
[Ensembl]
¡û
>C11118514
CP002562
Bacteroidota
Riemerella anatipestifer RA-GD [CP002562]
206086
205999
-
Ser
TGA
[Ensembl]
¡û
>W11141051
AENH01000009
Bacteroidota
Riemerella anatipestifer RA-YM [AENH]
70379
70466
+
Ser
TGA
[ENA]
¡û
>W1511584120
LAVB01000007
Bacteroidota
Riemerella anatipestifer RA-JLLY [LAVB]
303709
303622
-
Ser
TGA
[ENA]
¡û
>C121012013
CP003388
Bacteroidota
Riemerella anatipestifer ATCC 11845 = DSM 15868 [CP003388]
96307
96394
+
Ser
TGA
-
¡û
>C161034903
CP011390
Bacteroidota
Flavisolibacter tropicus LCS9 [CP011390]
804146
804061
-
Ser
TGA
[Ensembl]
¡û
>C161090541
CP015772
Bacteroidota
Niabella ginsenosidivorans BS26 [CP015772]
3276619
3276704
+
Ser
TGA
[Ensembl]
¡û
>C131006683
CP003787
Bacteroidota
Riemerella anatipestifer RA-CH-1 [CP003787]
2230790
2230703
-
Ser
TGA
[Ensembl]
¡û
>C131011626
CP004020
Bacteroidota
Riemerella anatipestifer RA-CH-2 [CP004020]
1746837
1746750
-
Ser
TGA
[Ensembl]
¡û
>W1610928942
LUDG01000006
Bacteroidota
Riemerella anatipestifer [LUDG]
47208
47121
-
Ser
TGA
[ENA]
¡û
>W1610928978
LUDH01000005
Bacteroidota
Riemerella anatipestifer [LUDH]
68070
68157
+
Ser
TGA
[ENA]
¡û
>W1610928982
LUDI01000001
Bacteroidota
Riemerella anatipestifer [LUDI]
272349
272436
+
Ser
TGA
[ENA]
¡û
>W1610929044
LUDJ01000006
Bacteroidota
Riemerella anatipestifer [LUDJ]
70650
70737
+
Ser
TGA
[ENA]
¡û
>W1610929086
LUDK01000005
Bacteroidota
Riemerella anatipestifer [LUDK]
70442
70529
+
Ser
TGA
[ENA]
¡û
>W1610929121
LUDL01000006
Bacteroidota
Riemerella anatipestifer [LUDL]
70676
70763
+
Ser
TGA
[ENA]
¡û
>W1610929168
LUDM01000007
Bacteroidota
Riemerella anatipestifer [LUDM]
70443
70530
+
Ser
TGA
[ENA]
¡û
>W1610929204
LUDN01000007
Bacteroidota
Riemerella anatipestifer [LUDN]
70441
70528
+
Ser
TGA
[ENA]
¡û
>W1610929240
LUDO01000005
Bacteroidota
Riemerella anatipestifer [LUDO]
70439
70526
+
Ser
TGA
[ENA]
¡û
>W1610929275
LUDP01000007
Bacteroidota
Riemerella anatipestifer [LUDP]
60375
60462
+
Ser
TGA
[ENA]
¡û
>W1610929312
LUDQ01000005
Bacteroidota
Riemerella anatipestifer [LUDQ]
96655
96568
-
Ser
TGA
[ENA]
¡û
>W1610929330
LUDR01000007
Bacteroidota
Riemerella anatipestifer [LUDR]
104214
104301
+
Ser
TGA
[ENA]
¡û
>W1610929380
LUDS01000006
Bacteroidota
Riemerella anatipestifer [LUDS]
70441
70528
+
Ser
TGA
[ENA]
¡û
>W1610929456
LUDU01000005
Bacteroidota
Riemerella anatipestifer [LUDU]
95914
95827
-
Ser
TGA
[ENA]
¡û
>W1610929492
LUDV01000006
Bacteroidota
Riemerella anatipestifer [LUDV]
45853
45766
-
Ser
TGA
[ENA]
¡û
>W1710583438
FQUU01000001
Bacteroidota
Flavisolibacter ginsengisoli DSM 18119 [FQUU]
130373
130286
-
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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