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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.90409 (276 seq.)
>W1711107759
LTTC01000021
Gammaproteobacteria
Haemophilus sp. HMSC068C11 [LTTC]
1665
1750
+
Leu
CAA
[ENA]
¡û
>W1711110421
LTVN01000035
Gammaproteobacteria
Haemophilus sp. HMSC073C03 [LTVN]
50960
50875
-
Leu
CAA
[ENA]
¡û
>W1711188512
LWQN01000019
Gammaproteobacteria
Haemophilus sp. HMSC066D03 [LWQN]
35620
35535
-
Leu
CAA
[ENA]
¡û
>W1711188681
LWQR01000034
Gammaproteobacteria
Haemophilus sp. HMSC61B11 [LWQR]
1666
1751
+
Leu
CAA
[ENA]
¡û
>W1711466105
MJMB01000046
Gammaproteobacteria
Rodentibacter pneumotropicus [MJMB]
72066
72151
+
Leu
CAA
[ENA]
¡û
>W1711507748
MKXX01000010
Gammaproteobacteria
Haemophilus parainfluenzae [MKXX]
400661
400576
-
Leu
CAA
[ENA]
¡û
>W1711509894
MLAC01000063
Gammaproteobacteria
Rodentibacter heylii [MLAC]
7411
7496
+
Leu
CAA
[ENA]
¡û
>W1711509901
MLAD01000004
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAD]
23420
23505
+
Leu
CAA
[ENA]
¡û
>W1711509984
MLAE01000056
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAE]
2731
2646
-
Leu
CAA
[ENA]
¡û
>W1711510028
MLAF01000042
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAF]
24923
25008
+
Leu
CAA
[ENA]
¡û
>W1711510069
MLAG01000035
Gammaproteobacteria
Rodentibacter ratti [MLAG]
4644
4559
-
Leu
CAA
[ENA]
¡û
>W1711510217
MLAJ01000006
Gammaproteobacteria
Rodentibacter ratti [MLAJ]
83530
83445
-
Leu
CAA
[ENA]
¡û
>W1711515095
MLHG01000029
Gammaproteobacteria
Rodentibacter mrazii [MLHG]
8068
7983
-
Leu
CAA
[ENA]
¡û
>W1711515130
MLHH01000001
Gammaproteobacteria
Rodentibacter heidelbergensis [MLHH]
3006
3091
+
Leu
CAA
[ENA]
¡û
>W1711515194
MLHI01000055
Gammaproteobacteria
Rodentibacter rarus [MLHI]
14832
14747
-
Leu
CAA
[ENA]
¡û
>W1711515249
MLHJ01000070
Gammaproteobacteria
Rodentibacter rarus [MLHJ]
36435
36520
+
Leu
CAA
[ENA]
¡û
>W1711515283
MLHK01000028
Gammaproteobacteria
Rodentibacter trehalosifermentans ratti [MLHK]
12134
12049
-
Leu
CAA
[ENA]
¡û
>W1711515404
MLHM01000144
Gammaproteobacteria
Rodentibacter trehalosifermentans [MLHM]
2153
2238
+
Leu
CAA
[ENA]
¡û
>W1711515413
MLHN01000002
Gammaproteobacteria
Rodentibacter genomosp. 1 [MLHN]
57518
57603
+
Leu
CAA
[ENA]
¡û
>W1711515521
MLHP01000014
Gammaproteobacteria
Rodentibacter genomosp. 2 [MLHP]
26672
26757
+
Leu
CAA
[ENA]
¡û
>W1711609509
MOTP01000017
Gammaproteobacteria
Haemophilus parainfluenzae [MOTP]
32731
32816
+
Leu
CAA
[ENA]
¡û
>W131170459
ARFN01000039
Gammaproteobacteria
Actinobacillus capsulatus DSM 19761 [ARFN]
92235
92320
+
Leu
CAA
[ENA]
¡û
>WENV180003887
FLRP01014605
[FLRP] metagenome; saliva
114
199
+
Leu
CAA
[ENA]
¢þ
>WENV180004176
FLRQ01109113
[FLRQ] metagenome; saliva
1663
1748
+
Leu
CAA
[ENA]
¢þ
>WENV180005674
FLRW01224046
[FLRW] metagenome; saliva
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV180006666
FLRY01203579
[FLRY] metagenome; saliva
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV180007829
FLSB01000121
[FLSB] metagenome; saliva
20666
20581
-
Leu
CAA
[ENA]
¢þ
>WENV180009476
FLSC01004588
[FLSC] metagenome; saliva
1098
1013
-
Leu
CAA
[ENA]
¢þ
>WENV180011557
FLSK01004452
[FLSK] metagenome; saliva
1810
1725
-
Leu
CAA
[ENA]
¢þ
>WENV180011743
FLSK01036564
[FLSK] metagenome; saliva
3
88
+
Leu
CAA
[ENA]
¢þ
>W141004234
AFQS01000002
Gammaproteobacteria
Haemophilus parainfluenzae ATCC 33392 [AFQS]
251377
251462
+
Leu
CAA
[ENA]
¡û
>WENV180139930
OATT01001992
[OATT] human gut metagenome; faeces
7403
7488
+
Leu
CAA
[ENA]
¢þ
>WENV180155072
OAUU01003062
[OAUU] human gut metagenome; faeces
3024
2939
-
Leu
CAA
[ENA]
¢þ
>WENV180157852
OAUX01009929
[OAUX] human gut metagenome; faeces
205
120
-
Leu
CAA
[ENA]
¢þ
>WENV180171549
OAVW01003564
[OAVW] human gut metagenome; faeces
1708
1623
-
Leu
CAA
[ENA]
¢þ
>WENV180225993
OBBP01014778
[OBBP] human oral metagenome; human oral
154
239
+
Leu
CAA
[ENA]
¢þ
>WENV180316031
OBKI01001740
[OBKI] human gut metagenome; human gut
2409
2324
-
Leu
CAA
[ENA]
¢þ
>WENV180416405
OBVG01001383
[OBVG] human gut metagenome; faeces
282
197
-
Leu
CAA
[ENA]
¢þ
>WENV180418381
OBVJ01006297
[OBVJ] human gut metagenome; faeces
852
767
-
Leu
CAA
[ENA]
¢þ
>WENV180419725
OBVN01000419
[OBVN] human gut metagenome; faeces
9332
9247
-
Leu
CAA
[ENA]
¢þ
>WENV180423586
OBVW01001487
[OBVW] human gut metagenome; faeces
2487
2402
-
Leu
CAA
[ENA]
¢þ
>WENV180424684
OBVX01007531
[OBVX] human gut metagenome; faeces
1403
1318
-
Leu
CAA
[ENA]
¢þ
>WENV180433341
OBWJ01001633
[OBWJ] human gut metagenome; faeces
3705
3790
+
Leu
CAA
[ENA]
¢þ
>WENV180434071
OBWK01007994
[OBWK] human gut metagenome; faeces
653
568
-
Leu
CAA
[ENA]
¢þ
>WENV180442631
OBWX01001698
[OBWX] human gut metagenome; faeces
656
741
+
Leu
CAA
[ENA]
¢þ
>WENV180445396
OBXA01004473
[OBXA] human gut metagenome; faeces
3358
3443
+
Leu
CAA
[ENA]
¢þ
>WENV180453047
OBXL01000027
[OBXL] human gut metagenome; faeces
18095
18180
+
Leu
CAA
[ENA]
¢þ
>WENV180468685
OBYL01000438
[OBYL] human gut metagenome; faeces
1574
1659
+
Leu
CAA
[ENA]
¢þ
>WENV180476422
OBYX01007831
[OBYX] human gut metagenome; faeces
340
255
-
Leu
CAA
[ENA]
¢þ
>WENV180479532
OBZC01004292
[OBZC] human gut metagenome; faeces
2721
2636
-
Leu
CAA
[ENA]
¢þ
>WENV180495055
OCAA01003632
[OCAA] human gut metagenome; faeces
3664
3749
+
Leu
CAA
[ENA]
¢þ
>WENV180506766
OCAS01006909
[OCAS] human gut metagenome; faeces
1433
1518
+
Leu
CAA
[ENA]
¢þ
>WENV180556216
OCJR01000006
[OCJR] human oral metagenome; Infant 1 DOL 23 oral
92340
92425
+
Leu
CAA
[ENA]
¢þ
>WENV180647080
OCSH01031110
[OCSH] human gut metagenome; human gut
972
1057
+
Leu
CAA
[ENA]
¢þ
>WENV180696289
ODCT01000003
[ODCT] human metagenome; G_DNA_Buccal mucosa
143612
143527
-
Leu
CAA
[ENA]
¢þ
>WENV180708232
ODFJ01000650
[ODFJ] human metagenome; G_DNA_Tongue dorsum
4725
4640
-
Leu
CAA
[ENA]
¢þ
>WENV180716184
ODFX01000084
[ODFX] human metagenome; G_DNA_Buccal mucosa
13626
13541
-
Leu
CAA
[ENA]
¢þ
>WENV180716881
ODGA01000001
[ODGA] human metagenome; G_DNA_Buccal mucosa
299749
299664
-
Leu
CAA
[ENA]
¢þ
>WENV180720197
ODGJ01023040
[ODGJ] human metagenome; G_DNA_Tongue dorsum
193
108
-
Leu
CAA
[ENA]
¢þ
>WENV180721009
ODGK01000833
[ODGK] human metagenome; G_DNA_Palatine Tonsils
1406
1491
+
Leu
CAA
[ENA]
¢þ
>WENV180722635
ODGM01005466
[ODGM] human metagenome; G_DNA_Palatine Tonsils
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV180723957
ODGR01000001
[ODGR] human metagenome; G_DNA_Tongue dorsum
317382
317297
-
Leu
CAA
[ENA]
¢þ
>WENV180731251
ODGW01000003
[ODGW] human metagenome; G_DNA_Supragingival plaque
91955
92040
+
Leu
CAA
[ENA]
¢þ
>WENV180750376
ODHS01001727
[ODHS] human metagenome; G_DNA_Supragingival plaque
2979
3064
+
Leu
CAA
[ENA]
¢þ
>WENV180757398
ODHW01000317
[ODHW] human metagenome; G_DNA_Tongue dorsum
4679
4594
-
Leu
CAA
[ENA]
¢þ
>WENV180758530
ODHX01000001
[ODHX] human metagenome; G_DNA_Buccal mucosa
94169
94254
+
Leu
CAA
[ENA]
¢þ
>WENV180759398
ODHY01009672
[ODHY] human metagenome; G_DNA_Buccal mucosa
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV180764447
ODIB01000001
[ODIB] human metagenome; G_DNA_Supragingival plaque
418060
417975
-
Leu
CAA
[ENA]
¢þ
>WENV180768738
ODIG01014969
[ODIG] human metagenome; G_DNA_Tongue dorsum
1282
1367
+
Leu
CAA
[ENA]
¢þ
>WENV180773060
ODII01001947
[ODII] human metagenome; G_DNA_Buccal mucosa
86
1
-
Leu
CAA
[ENA]
¢þ
>WENV180775932
ODIK01008184
[ODIK] human metagenome; G_DNA_Tongue dorsum
503
418
-
Leu
CAA
[ENA]
¢þ
>WENV180777044
ODIL01000009
[ODIL] human metagenome; G_DNA_Supragingival plaque
36987
37072
+
Leu
CAA
[ENA]
¢þ
>WENV180778988
ODIN01000084
[ODIN] human metagenome; G_DNA_Throat
48988
48903
-
Leu
CAA
[ENA]
¢þ
>WENV180781590
ODIP01001020
[ODIP] human metagenome; G_DNA_Supragingival plaque
7125
7040
-
Leu
CAA
[ENA]
¢þ
>WENV180786775
ODIS01000182
[ODIS] human metagenome; G_DNA_Supragingival plaque
1514
1599
+
Leu
CAA
[ENA]
¢þ
>WENV180791668
ODIV01000504
[ODIV] human metagenome; G_DNA_Buccal mucosa
3421
3336
-
Leu
CAA
[ENA]
¢þ
>WENV180792390
ODIW01000368
[ODIW] human metagenome; G_DNA_Tongue dorsum
12928
13013
+
Leu
CAA
[ENA]
¢þ
>WENV180793966
ODIY01000017
[ODIY] human metagenome; G_DNA_Buccal mucosa
52931
53016
+
Leu
CAA
[ENA]
¢þ
>WENV180794076
ODIY01000998
[ODIY] human metagenome; G_DNA_Buccal mucosa
1703
1788
+
Leu
CAA
[ENA]
¢þ
>WENV180794266
ODIZ01000038
[ODIZ] human metagenome; G_DNA_Tongue dorsum
70483
70398
-
Leu
CAA
[ENA]
¢þ
>WENV180803660
ODJG01000014
[ODJG] human metagenome; G_DNA_Supragingival plaque
31773
31858
+
Leu
CAA
[ENA]
¢þ
>WENV180806142
ODJH01002775
[ODJH] human metagenome; G_DNA_Tongue dorsum
3713
3798
+
Leu
CAA
[ENA]
¢þ
>WENV180807891
ODJI01015542
[ODJI] human metagenome; G_DNA_Tongue dorsum
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV180808533
ODJK01000172
[ODJK] human metagenome; G_DNA_Subgingival plaque
28028
28113
+
Leu
CAA
[ENA]
¢þ
>WENV180810735
ODJM01000334
[ODJM] human metagenome; G_DNA_Buccal mucosa
87
2
-
Leu
CAA
[ENA]
¢þ
>WENV180814476
ODJO01018402
[ODJO] human metagenome; G_DNA_Supragingival plaque
118
33
-
Leu
CAA
[ENA]
¢þ
>WENV180815741
ODJP01001498
[ODJP] human metagenome; G_DNA_Tongue dorsum
143
58
-
Leu
CAA
[ENA]
¢þ
>WENV180818916
ODJQ01124907
[ODJQ] human metagenome; G_DNA_Stool
195
110
-
Leu
CAA
[ENA]
¢þ
>WENV180821497
ODJS01012496
[ODJS] human metagenome; G_DNA_Tongue dorsum
1284
1369
+
Leu
CAA
[ENA]
¢þ
>WENV180822796
ODJW01000002
[ODJW] human metagenome; G_DNA_Supragingival plaque
28581
28666
+
Leu
CAA
[ENA]
¢þ
>WENV180824135
ODJX01000958
[ODJX] human metagenome; G_DNA_Supragingival plaque
8914
8999
+
Leu
CAA
[ENA]
¢þ
>WENV180831716
ODKC01000049
[ODKC] human metagenome; G_DNA_Supragingival plaque
117384
117299
-
Leu
CAA
[ENA]
¢þ
>WENV180834229
ODKD01007006
[ODKD] human metagenome; G_DNA_Supragingival plaque
1297
1382
+
Leu
CAA
[ENA]
¢þ
>WENV180836189
ODKE01059929
[ODKE] human metagenome; G_DNA_Supragingival plaque
413
498
+
Leu
CAA
[ENA]
¢þ
>WENV180841495
ODKK01000003
[ODKK] human metagenome; G_DNA_Buccal mucosa
66832
66747
-
Leu
CAA
[ENA]
¢þ
>WENV180842755
ODKN01000005
[ODKN] human metagenome; G_DNA_Supragingival plaque
196696
196611
-
Leu
CAA
[ENA]
¢þ
>WENV180845323
ODKT01000121
[ODKT] human metagenome; G_DNA_Supragingival plaque
39360
39275
-
Leu
CAA
[ENA]
¢þ
>WENV180856945
ODLA01000033
[ODLA] human metagenome; G_DNA_Buccal mucosa
32018
31933
-
Leu
CAA
[ENA]
¢þ
>WENV180856962
ODLA01000079
[ODLA] human metagenome; G_DNA_Buccal mucosa
22341
22426
+
Leu
CAA
[ENA]
¢þ
>WENV180859078
ODLD01000007
[ODLD] human metagenome; G_DNA_Supragingival plaque
264375
264290
-
Leu
CAA
[ENA]
¢þ
>WENV180861917
ODLE01018859
[ODLE] human metagenome; G_DNA_Tongue dorsum
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV180863128
ODLG01000064
[ODLG] human metagenome; G_DNA_Buccal mucosa
11373
11288
-
Leu
CAA
[ENA]
¢þ
>WENV180865969
ODLJ01002200
[ODLJ] human metagenome; G_DNA_Tongue dorsum
1100
1015
-
Leu
CAA
[ENA]
¢þ
>WENV180873485
ODLP01007615
[ODLP] human metagenome; G_DNA_Tongue dorsum
1264
1179
-
Leu
CAA
[ENA]
¢þ
>WENV180874544
ODLQ01001383
[ODLQ] human metagenome; G_DNA_Tongue dorsum
6991
7076
+
Leu
CAA
[ENA]
¢þ
>WENV180877556
ODLV01000366
[ODLV] human metagenome; G_DNA_Tongue dorsum
6877
6962
+
Leu
CAA
[ENA]
¢þ
>WENV180880174
ODLZ01009506
[ODLZ] human metagenome; G_DNA_Tongue dorsum
1656
1571
-
Leu
CAA
[ENA]
¢þ
>WENV180881838
ODMB01000111
[ODMB] human metagenome; G_DNA_Buccal mucosa
18273
18188
-
Leu
CAA
[ENA]
¢þ
>WENV180881881
ODMB01000322
[ODMB] human metagenome; G_DNA_Buccal mucosa
9716
9631
-
Leu
CAA
[ENA]
¢þ
>WENV180883882
ODMC01019977
[ODMC] human metagenome; G_DNA_Tongue dorsum
1607
1692
+
Leu
CAA
[ENA]
¢þ
>WENV180890081
ODMO01000051
[ODMO] human metagenome; G_DNA_Tongue dorsum
127
42
-
Leu
CAA
[ENA]
¢þ
>WENV180891409
ODMQ01000028
[ODMQ] human metagenome; G_DNA_Supragingival plaque
59179
59094
-
Leu
CAA
[ENA]
¢þ
>WENV180899758
ODOJ01000023
[ODOJ] human metagenome; G_DNA_Tongue dorsum
52269
52354
+
Leu
CAA
[ENA]
¢þ
>WENV180913167
ODST01000003
[ODST] human metagenome; G_DNA_Attached/Keratinized gingiva
119114
119029
-
Leu
CAA
[ENA]
¢þ
>WENV180920585
ODTH01010484
[ODTH] human metagenome; G_DNA_Tongue dorsum
932
847
-
Leu
CAA
[ENA]
¢þ
>WENV180930204
ODTO01000153
[ODTO] human metagenome; G_DNA_Buccal mucosa
8557
8642
+
Leu
CAA
[ENA]
¢þ
>WENV180932828
ODTQ01000004
[ODTQ] human metagenome; G_DNA_Buccal mucosa
53558
53643
+
Leu
CAA
[ENA]
¢þ
>WENV180932998
ODTQ01002264
[ODTQ] human metagenome; G_DNA_Buccal mucosa
1964
2049
+
Leu
CAA
[ENA]
¢þ
>WENV180934250
ODTR01066650
[ODTR] human metagenome; G_DNA_Supragingival plaque
125
40
-
Leu
CAA
[ENA]
¢þ
>WENV180943399
ODUC01000366
[ODUC] human metagenome; G_DNA_Supragingival plaque
11473
11388
-
Leu
CAA
[ENA]
¢þ
>WENV180952890
ODUI01003454
[ODUI] human metagenome; G_DNA_Tongue dorsum
4006
3921
-
Leu
CAA
[ENA]
¢þ
>WENV180957871
ODUL01000001
[ODUL] human metagenome; G_DNA_Supragingival plaque
215889
215804
-
Leu
CAA
[ENA]
¢þ
>WENV180960110
ODUM01010775
[ODUM] human metagenome; G_DNA_Tongue dorsum
1283
1368
+
Leu
CAA
[ENA]
¢þ
>WENV180967331
ODUT01000293
[ODUT] human metagenome; G_DNA_Tongue dorsum
28289
28204
-
Leu
CAA
[ENA]
¢þ
>WENV180974408
ODUX01000803
[ODUX] human metagenome; G_DNA_Buccal mucosa
1297
1382
+
Leu
CAA
[ENA]
¢þ
>WENV180978042
ODUZ01015883
[ODUZ] human metagenome; G_DNA_Tongue dorsum
1322
1407
+
Leu
CAA
[ENA]
¢þ
>WENV180979595
ODVC01000366
[ODVC] human metagenome; G_DNA_Attached/Keratinized gingiva
24490
24575
+
Leu
CAA
[ENA]
¢þ
>WENV180982734
ODVF01000448
[ODVF] human metagenome; G_DNA_Supragingival plaque
1324
1409
+
Leu
CAA
[ENA]
¢þ
>WENV180990977
ODVN01010476
[ODVN] human metagenome; G_DNA_Tongue dorsum
748
663
-
Leu
CAA
[ENA]
¢þ
>WENV180991900
ODVO01007655
[ODVO] human metagenome; G_DNA_Buccal mucosa
127
42
-
Leu
CAA
[ENA]
¢þ
>WENV181001461
ODVW01000001
[ODVW] human metagenome; G_DNA_Buccal mucosa
1690
1775
+
Leu
CAA
[ENA]
¢þ
>WENV181002114
ODVX01000023
[ODVX] human metagenome; G_DNA_Supragingival plaque
58034
57949
-
Leu
CAA
[ENA]
¢þ
>WENV181007252
ODWE01000006
[ODWE] human metagenome; G_DNA_Supragingival plaque
16826
16911
+
Leu
CAA
[ENA]
¢þ
>WENV181011226
ODWI01013199
[ODWI] human metagenome; G_DNA_Tongue dorsum
86
1
-
Leu
CAA
[ENA]
¢þ
>WENV181012228
ODWJ01076169
[ODWJ] human metagenome; G_DNA_Buccal mucosa
86
1
-
Leu
CAA
[ENA]
¢þ
>WENV181017020
ODWR01019475
[ODWR] human metagenome; G_DNA_Tongue dorsum
88
3
-
Leu
CAA
[ENA]
¢þ
>WENV181018842
ODWU01000126
[ODWU] human metagenome; G_DNA_Supragingival plaque
2841
2926
+
Leu
CAA
[ENA]
¢þ
>WENV181040998
ODXS01003066
[ODXS] human metagenome; G_DNA_Tongue dorsum
5751
5836
+
Leu
CAA
[ENA]
¢þ
>WENV181043972
ODXV01001893
[ODXV] human metagenome; G_DNA_Tongue dorsum
1659
1574
-
Leu
CAA
[ENA]
¢þ
>WENV181050181
ODYD01008222
[ODYD] human metagenome; G_DNA_Supragingival plaque
3327
3412
+
Leu
CAA
[ENA]
¢þ
>WENV181059635
ODYM01004167
[ODYM] human metagenome; G_DNA_Tongue dorsum
1690
1775
+
Leu
CAA
[ENA]
¢þ
>WENV181063006
ODYP01000023
[ODYP] human metagenome; G_DNA_Supragingival plaque
9683
9768
+
Leu
CAA
[ENA]
¢þ
>WENV181075466
OEAP01000001
[OEAP] human metagenome; G_DNA_Supragingival plaque
48701
48786
+
Leu
CAA
[ENA]
¢þ
>WENV181082469
OEAV01000009
[OEAV] human metagenome; G_DNA_Supragingival plaque
74719
74804
+
Leu
CAA
[ENA]
¢þ
>WENV181086728
OEAY01002508
[OEAY] human metagenome; G_DNA_Tongue dorsum
3684
3769
+
Leu
CAA
[ENA]
¢þ
>WENV181095527
OEBY01011425
[OEBY] human metagenome; G_DNA_Tongue dorsum
2234
2319
+
Leu
CAA
[ENA]
¢þ
>WENV181096960
OECA01001261
[OECA] human metagenome; G_DNA_Tongue dorsum
8298
8213
-
Leu
CAA
[ENA]
¢þ
>WENV181103853
OECV01006337
[OECV] human metagenome; G_DNA_Throat
162
77
-
Leu
CAA
[ENA]
¢þ
>WENV181105113
OEED01001083
[OEED] human metagenome; G_DNA_Tongue dorsum
9494
9579
+
Leu
CAA
[ENA]
¢þ
>WENV181108631
OEEJ01000116
[OEEJ] human metagenome; G_DNA_Tongue dorsum
41368
41453
+
Leu
CAA
[ENA]
¢þ
>WENV181122747
OEFN01000054
[OEFN] human metagenome; G_DNA_Buccal mucosa
17033
16948
-
Leu
CAA
[ENA]
¢þ
>WENV181123548
OEFQ01000026
[OEFQ] human metagenome; G_DNA_Supragingival plaque
43463
43378
-
Leu
CAA
[ENA]
¢þ
>WENV181130173
OEFY01001944
[OEFY] human metagenome; G_DNA_Throat
5051
5136
+
Leu
CAA
[ENA]
¢þ
>WENV181131169
OEGA01000058
[OEGA] human metagenome; G_DNA_Buccal mucosa
7706
7621
-
Leu
CAA
[ENA]
¢þ
>WENV181135828
OEGI01000003
[OEGI] human metagenome; G_DNA_Supragingival plaque
431466
431381
-
Leu
CAA
[ENA]
¢þ
>WENV181137009
OEGJ01000025
[OEGJ] human metagenome; G_DNA_Supragingival plaque
29943
30028
+
Leu
CAA
[ENA]
¢þ
>WENV181143463
OEHM01001060
[OEHM] human metagenome; G_DNA_Supragingival plaque
8654
8569
-
Leu
CAA
[ENA]
¢þ
>WENV181150949
OEHW01012216
[OEHW] human metagenome; G_DNA_Tongue dorsum
1166
1081
-
Leu
CAA
[ENA]
¢þ
>WENV181152772
OEIA01005843
[OEIA] human metagenome; G_DNA_Supragingival plaque
1917
1832
-
Leu
CAA
[ENA]
¢þ
>WENV181154573
OEIC01006442
[OEIC] human metagenome; G_DNA_Stool
2361
2446
+
Leu
CAA
[ENA]
¢þ
>WENV181156974
OEIG01000031
[OEIG] human metagenome; G_DNA_Hard palate
60186
60271
+
Leu
CAA
[ENA]
¢þ
>WENV181157626
OEIG01016351
[OEIG] human metagenome; G_DNA_Hard palate
86
1
-
Leu
CAA
[ENA]
¢þ
>WENV181159991
OEIK01001169
[OEIK] human metagenome; G_DNA_Supragingival plaque
12269
12354
+
Leu
CAA
[ENA]
¢þ
>WENV181176467
OEJR01006077
[OEJR] human metagenome; G_DNA_Saliva
364
279
-
Leu
CAA
[ENA]
¢þ
>WENV181182011
OEJV01001518
[OEJV] human metagenome; G_DNA_Supragingival plaque
7789
7704
-
Leu
CAA
[ENA]
¢þ
>WENV181187791
OENZ01010098
[OENZ] human gut metagenome; human gut
81
166
+
Leu
CAA
[ENA]
¢þ
>WENV181427912
OGCU01000221
[OGCU] metagenome; Human gut stool
8586
8671
+
Leu
CAA
[ENA]
¢þ
>WENV181429363
OGCX01001920
[OGCX] metagenome; Human gut stool
3726
3641
-
Leu
CAA
[ENA]
¢þ
>WENV181429708
OGCY01000161
[OGCY] metagenome; Human gut stool
27121
27206
+
Leu
CAA
[ENA]
¢þ
>WENV181438447
OGDJ01000187
[OGDJ] metagenome; Human gut stool
21866
21781
-
Leu
CAA
[ENA]
¢þ
>WENV181457489
OGEI01001066
[OGEI] metagenome; Human gut stool
874
789
-
Leu
CAA
[ENA]
¢þ
>WENV181461390
OGEM01011070
[OGEM] metagenome; Human gut stool
346
431
+
Leu
CAA
[ENA]
¢þ
>WENV181463348
OGEO01001791
[OGEO] metagenome; Human gut stool
1584
1499
-
Leu
CAA
[ENA]
¢þ
>WENV181466179
OGEQ01002500
[OGEQ] metagenome; Human gut stool
810
725
-
Leu
CAA
[ENA]
¢þ
>WENV181467928
OGES01000101
[OGES] metagenome; Human gut stool
70933
71018
+
Leu
CAA
[ENA]
¢þ
>WENV181469467
OGET01001342
[OGET] metagenome; Human gut stool
2779
2694
-
Leu
CAA
[ENA]
¢þ
>WENV181470237
OGEU01002089
[OGEU] metagenome; Human gut stool
10866
10781
-
Leu
CAA
[ENA]
¢þ
>WENV181479319
OGFG01001659
[OGFG] metagenome; Human gut stool
8720
8635
-
Leu
CAA
[ENA]
¢þ
>WENV181483633
OGFK01012350
[OGFK] metagenome; Human gut stool
2056
2141
+
Leu
CAA
[ENA]
¢þ
>WENV181484803
OGFL01022080
[OGFL] metagenome; Human gut stool
219
304
+
Leu
CAA
[ENA]
¢þ
>WENV181488771
OGFR01000636
[OGFR] metagenome; Human gut stool
1667
1752
+
Leu
CAA
[ENA]
¢þ
>WENV181491220
OGFX01006894
[OGFX] metagenome; Human gut stool
1139
1224
+
Leu
CAA
[ENA]
¢þ
>WENV181506266
OGGM01000510
[OGGM] metagenome; Human gut stool
1772
1857
+
Leu
CAA
[ENA]
¢þ
>WENV181506938
OGGO01000176
[OGGO] metagenome; Human gut stool
4054
3969
-
Leu
CAA
[ENA]
¢þ
>WENV181527812
OGHK01009041
[OGHK] metagenome; Human gut stool
878
793
-
Leu
CAA
[ENA]
¢þ
>WENV181529537
OGHM01000528
[OGHM] metagenome; Human gut stool
17708
17793
+
Leu
CAA
[ENA]
¢þ
>WENV181547730
OGIJ01000267
[OGIJ] metagenome; Human gut stool
21792
21707
-
Leu
CAA
[ENA]
¢þ
>WENV181554194
OGIR01010846
[OGIR] metagenome; Human gut stool
2220
2305
+
Leu
CAA
[ENA]
¢þ
>WENV181556621
OGIV01000048
[OGIV] metagenome; Human gut stool
21771
21686
-
Leu
CAA
[ENA]
¢þ
>WENV181558154
OGIW01013396
[OGIW] metagenome; Human gut stool
598
513
-
Leu
CAA
[ENA]
¢þ
>WENV181559259
OGIZ01000230
[OGIZ] metagenome; Human gut stool
561
646
+
Leu
CAA
[ENA]
¢þ
>WENV181560793
OGJC01005810
[OGJC] metagenome; Human gut stool
430
515
+
Leu
CAA
[ENA]
¢þ
>WENV181574295
OGJT01000014
[OGJT] metagenome; Human gut stool
140719
140634
-
Leu
CAA
[ENA]
¢þ
>WENV181580166
OGJZ01008479
[OGJZ] metagenome; Human gut stool
2295
2210
-
Leu
CAA
[ENA]
¢þ
>WENV181583873
OGKD01044539
[OGKD] metagenome; Human gut stool
591
506
-
Leu
CAA
[ENA]
¢þ
>WENV181588543
OGKJ01000011
[OGKJ] metagenome; Human gut stool
94410
94495
+
Leu
CAA
[ENA]
¢þ
>WENV181633484
OGMV01002256
[OGMV] metagenome; Human gut stool
1536
1451
-
Leu
CAA
[ENA]
¢þ
>WENV181647996
OGNQ01002218
[OGNQ] metagenome; Human gut stool
9912
9997
+
Leu
CAA
[ENA]
¢þ
>WENV181686174
OGOW01006419
[OGOW] human gut metagenome; faeces
4739
4654
-
Leu
CAA
[ENA]
¢þ
>WENV181712145
OGPP01006331
[OGPP] human gut metagenome; faeces
2279
2364
+
Leu
CAA
[ENA]
¢þ
>WENV181809877
OGSU01000036
[OGSU] human gut metagenome; fecal sample 7 from infant 5
14372
14457
+
Leu
CAA
[ENA]
¢þ
>WENV181878446
OGXE01003402
[OGXE] human gut metagenome; faeces
10654
10739
+
Leu
CAA
[ENA]
¢þ
>WENV181925458
OGYM01002253
[OGYM] human gut metagenome; faeces
11399
11484
+
Leu
CAA
[ENA]
¢þ
>WENV181927300
OGYN01005758
[OGYN] human gut metagenome; faeces
5329
5414
+
Leu
CAA
[ENA]
¢þ
>WENV181940274
OGYX01035146
[OGYX] human gut metagenome; faeces
1283
1368
+
Leu
CAA
[ENA]
¢þ
>WENV181966504
OGZV01000002
[OGZV] human gut metagenome; faeces
89628
89713
+
Leu
CAA
[ENA]
¢þ
>WENV181984112
OHAI01004165
[OHAI] human gut metagenome; faeces
6718
6803
+
Leu
CAA
[ENA]
¢þ
>W141237226
BBIX01000008
Gammaproteobacteria
Rodentibacter pneumotropicus pneumotropica [BBIX]
198981
198896
-
Leu
CAA
[ENA]
¡û
>WENV182406996
OIFB01002604
[OIFB] human gut metagenome; human gut
518
603
+
Leu
CAA
[ENA]
¢þ
>WENV182411366
OIFP01000054
[OIFP] human gut metagenome; stool
93175
93260
+
Leu
CAA
[ENA]
¢þ
>WENV182412776
OIFW01000141
[OIFW] human gut metagenome; stool
4892
4807
-
Leu
CAA
[ENA]
¢þ
>WENV182597593
OJJB01001973
[OJJB] metagenome; faeces
1071
986
-
Leu
CAA
[ENA]
¢þ
>WENV182624400
OJKO01002963
[OJKO] metagenome; faeces
2980
3065
+
Leu
CAA
[ENA]
¢þ
>WENV182800355
OJUA01000350
[OJUA] human gut metagenome; human gut
4754
4669
-
Leu
CAA
[ENA]
¢þ
>WENV182827696
OKDC01000001
[OKDC] human gut metagenome; human gut
1446
1531
+
Leu
CAA
[ENA]
¢þ
>WENV182829750
OKDS01000005
[OKDS] human gut metagenome; human gut
119015
118930
-
Leu
CAA
[ENA]
¢þ
>WENV182835773
OKFR01000003
[OKFR] human gut metagenome; human gut
203476
203391
-
Leu
CAA
[ENA]
¢þ
>WENV182836705
OKFZ01000036
[OKFZ] human gut metagenome; human gut
32334
32419
+
Leu
CAA
[ENA]
¢þ
>WENV182842908
OKIH01000128
[OKIH] human gut metagenome; human gut
14088
14003
-
Leu
CAA
[ENA]
¢þ
>WENV182846711
OKJQ01001174
[OKJQ] human gut metagenome; human gut
373
458
+
Leu
CAA
[ENA]
¢þ
>WENV182858650
OKOF01001790
[OKOF] human gut metagenome; human gut
425
340
-
Leu
CAA
[ENA]
¢þ
>WENV182864762
OKQE01001338
[OKQE] human gut metagenome; human gut
878
963
+
Leu
CAA
[ENA]
¢þ
>WENV182872568
OKRV01009449
[OKRV] human gut metagenome; faeces
1690
1775
+
Leu
CAA
[ENA]
¢þ
>WENV182877036
OKRY01002771
[OKRY] human gut metagenome; faeces
11432
11517
+
Leu
CAA
[ENA]
¢þ
>WENV182879118
OKRZ01005525
[OKRZ] human gut metagenome; faeces
6072
6157
+
Leu
CAA
[ENA]
¢þ
>WENV182964954
OKWR01015798
[OKWR] human gut metagenome; human gut
304
219
-
Leu
CAA
[ENA]
¢þ
>WENV182965533
OKWS01000695
[OKWS] human gut metagenome; stool
622
707
+
Leu
CAA
[ENA]
¢þ
>WENV182966743
OKWX01000134
[OKWX] human gut metagenome; stool
22133
22218
+
Leu
CAA
[ENA]
¢þ
>WENV182967302
OKWZ01000341
[OKWZ] human gut metagenome; stool
4455
4540
+
Leu
CAA
[ENA]
¢þ
>WENV183091081
OLKF01019121
[OLKF] human gut metagenome; human gut
617
702
+
Leu
CAA
[ENA]
¢þ
>WENV183302188
OLSP01007964
[OLSP] human gut metagenome; faeces
4534
4619
+
Leu
CAA
[ENA]
¢þ
>WENV183417034
OMAS01043337
[OMAS] human gut metagenome; feces
121
206
+
Leu
CAA
[ENA]
¢þ
>WENV183507766
OMGY01063784
[OMGY] human gut metagenome; human gut
345
260
-
Leu
CAA
[ENA]
¢þ
>WENV183582423
OOCP01001836
[OOCP] human gut metagenome; human gut
6271
6186
-
Leu
CAA
[ENA]
¢þ
>WENV183590006
OOCW01034630
[OOCW] human gut metagenome; human gut
575
660
+
Leu
CAA
[ENA]
¢þ
>WENV183606424
OODN01005061
[OODN] human gut metagenome; human gut
373
288
-
Leu
CAA
[ENA]
¢þ
>WENV183611851
OODT01001580
[OODT] human gut metagenome; human gut
8810
8725
-
Leu
CAA
[ENA]
¢þ
>WENV183768927
PPYE01411950
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
71395
71480
+
Leu
CAA
[ENA]
¢þ
>WENV170082486
CDZY01055496
[CDZY] gut metagenome; human stools
861
946
+
Leu
CAA
[ENA]
¢þ
>C181148213
CP027235
Gammaproteobacteria
Haemophilus sp. oral taxon 036 F0629 [CP027235]
1788857
1788942
+
Leu
CAA
-
¡û
>C181225301
LT906456
Gammaproteobacteria
Actinobacillus suis NCTC12996 [LT906456]
982279
982364
+
Leu
CAA
-
¡û
>C191205676
LR134310
Gammaproteobacteria
Actinobacillus equuli NCTC8529 [LR134310]
200137
200222
+
Leu
CAA
-
¡û
>C191210791
LR134405
Gammaproteobacteria
Rodentibacter pneumotropicus NCTC8284 [LR134405]
1257704
1257789
+
Leu
CAA
-
¡û
>W1911775463
QXND01000064
Gammaproteobacteria
Rodentibacter pneumotropicus 394_12 [QXND]
1802
1717
-
Leu
CAA
[ENA]
¡û
>W1911775548
QXNF01000045
Gammaproteobacteria
Rodentibacter pneumotropicus FD1189 [QXNF]
44277
44362
+
Leu
CAA
[ENA]
¡û
>W1911775568
QXNG01000016
Gammaproteobacteria
Rodentibacter pneumotropicus 1596_07 [QXNG]
37459
37374
-
Leu
CAA
[ENA]
¡û
>W1911775659
QXNI01000049
Gammaproteobacteria
Rodentibacter pneumotropicus Ac84 [QXNI]
1177
1262
+
Leu
CAA
[ENA]
¡û
>W1911775746
QXNK01000027
Gammaproteobacteria
Rodentibacter pneumotropicus FD987 [QXNK]
15029
14944
-
Leu
CAA
[ENA]
¡û
>W1911775774
QXNL01000013
Gammaproteobacteria
Rodentibacter pneumotropicus Ppn271 [QXNL]
3377
3292
-
Leu
CAA
[ENA]
¡û
>W1810578104
QEPL01000001
Gammaproteobacteria
Haemophilus haemolyticus C2001002324 [QEPL]
575580
575495
-
Leu
CAA
[ENA]
¡û
>W1810578300
QEPP01000001
Gammaproteobacteria
Haemophilus parainfluenzae C2004002727 [QEPP]
91630
91715
+
Leu
CAA
[ENA]
¡û
>W1810578351
QEPQ01000001
Gammaproteobacteria
Haemophilus parainfluenzae C2004002729 [QEPQ]
91147
91232
+
Leu
CAA
[ENA]
¡û
>W1810578402
QEPR01000001
Gammaproteobacteria
Haemophilus parainfluenzae C2005004058 [QEPR]
94415
94500
+
Leu
CAA
[ENA]
¡û
>W1810578506
QEPT01000001
Gammaproteobacteria
Haemophilus parainfluenzae C2006002596 [QEPT]
14689
14774
+
Leu
CAA
[ENA]
¡û
>W1810578675
QEPW01000006
Gammaproteobacteria
Haemophilus parainfluenzae C2008001710 [QEPW]
20022
20107
+
Leu
CAA
[ENA]
¡û
>W1810578854
QEPZ01000006
Gammaproteobacteria
Haemophilus parainfluenzae C2008003258 [QEPZ]
56526
56611
+
Leu
CAA
[ENA]
¡û
>W1810578958
QEQB01000006
Gammaproteobacteria
Haemophilus parainfluenzae C2009038101 [QEQB]
88361
88276
-
Leu
CAA
[ENA]
¡û
>C151015360
CP006954
Gammaproteobacteria
Bibersteinia trehalosi USDA-ARS-USMARC-188 [CP006954]
1089344
1089259
-
Leu
CAA
[Ensembl]
¡û
>C151015417
CP006955
Gammaproteobacteria
Bibersteinia trehalosi USDA-ARS-USMARC-189 [CP006955]
1169833
1169748
-
Leu
CAA
[Ensembl]
¡û
>C151044968
CP009159
Gammaproteobacteria
Actinobacillus suis ATCC 33415 [CP009159]
982132
982217
+
Leu
CAA
[Ensembl]
¡û
>W10116753
ADOG01000012
Gammaproteobacteria
Actinobacillus pleuropneumoniae serovar 6 str. Femo [ADOG]
5486
5571
+
Leu
CAA
[ENA]
¡û
>C11110527
FQ312002
Gammaproteobacteria
Haemophilus parainfluenzae T3T1 [FQ312002]
1680670
1680585
-
Leu
CAA
[Ensembl]
¡û
>W11121606
ADOG01000012
Gammaproteobacteria
Actinobacillus pleuropneumoniae serovar 6 str. Femo [ADOG]
5486
5571
+
Leu
CAA
[ENA]
¡û
>W1511440061
JUOR01000033
Gammaproteobacteria
Haemophilus parainfluenzae 901_HPAR [JUOR]
25837
25922
+
Leu
CAA
[ENA]
¡û
>W1511441836
JUQZ01000003
Gammaproteobacteria
Haemophilus influenzae 841_HINF [JUQZ]
74472
74387
-
Leu
CAA
[ENA]
¡û
>W1511441953
JURC01000029
Gammaproteobacteria
Haemophilus influenzae 839_HINF [JURC]
28295
28380
+
Leu
CAA
[ENA]
¡û
>W1511443885
JUTJ01000029
Gammaproteobacteria
Haemophilus parainfluenzae 777_HPAR [JUTJ]
53727
53642
-
Leu
CAA
[ENA]
¡û
>W1511453456
JVFE01000066
Gammaproteobacteria
Haemophilus parainfluenzae 488_HPAR [JVFE]
80370
80285
-
Leu
CAA
[ENA]
¡û
>W1511456001
JVHG01000002
Gammaproteobacteria
Haemophilus parainfluenzae 432_HPAR [JVHG]
70974
71059
+
Leu
CAA
[ENA]
¡û
>W1511466152
JVRO01000027
Gammaproteobacteria
Haemophilus influenzae 167_HINF [JVRO]
95816
95901
+
Leu
CAA
[ENA]
¡û
>W1511466550
JVSB01000040
Gammaproteobacteria
Haemophilus parainfluenzae 155_HPAR [JVSB]
53630
53545
-
Leu
CAA
[ENA]
¡û
>W1511467275
JVSU01000083
Gammaproteobacteria
Haemophilus parainfluenzae 137_HINF [JVSU]
84268
84183
-
Leu
CAA
[ENA]
¡û
>W1511472080
JVYT01000079
Gammaproteobacteria
Haemophilus parainfluenzae 1209_HPAR [JVYT]
14369
14454
+
Leu
CAA
[ENA]
¡û
>W1511690062
LFXN01000005
Gammaproteobacteria
Haemophilus parainfluenzae 215035-2-ISO5 [LFXN]
205320
205235
-
Leu
CAA
[ENA]
¡û
>W121065079
AJMW01000064
Gammaproteobacteria
Haemophilus parainfluenzae HK262 [AJMW]
1648
1733
+
Leu
CAA
[ENA]
¡û
>W1611041876
LZOZ01000019
Gammaproteobacteria
Haemophilus sp. CCUG 60358 [LZOZ]
44898
44983
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
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(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
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End
Direction
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Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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