tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.97145 (115 seq.)
>W1710785360 LJHU01000023 Alphaproteobacteria Brevundimonas sp. AAP58 [LJHU] 28085 28169 + Leu TAG [ENA] ¡û
>W1710860193 LMCR01000016 Alphaproteobacteria Devosia sp. Root105 [LMCR] 230929 230845 - Leu TAG [ENA] ¡û
>W1710861893 LMDZ01000004 Alphaproteobacteria Phenylobacterium sp. Root1277 [LMDZ] 218113 218197 + Leu TAG [ENA] ¡û
>W1710861968 LMEA01000011 Alphaproteobacteria Devosia sp. Root413D1 [LMEA] 10508 10424 - Leu TAG [ENA] ¡û
>W1710861986 LMEB01000004 Alphaproteobacteria Brevundimonas sp. Root1279 [LMEB] 326717 326801 + Leu TAG [ENA] ¡û
>W1710862164 LMEE01000001 Alphaproteobacteria Phenylobacterium sp. Root1290 [LMEE] 269270 269354 + Leu TAG [ENA] ¡û
>W1710862566 LMEM01000001 Alphaproteobacteria Devosia sp. Root436 [LMEM] 404896 404812 - Leu TAG [ENA] ¡û
>W1710863880 LMFL01000045 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 31803 31887 + Leu TAG [ENA] ¡û
>W1710865852 LMGZ01000021 Alphaproteobacteria Devosia sp. Root635 [LMGZ] 69109 69025 - Leu TAG [ENA] ¡û
>W1710866784 LMHT01000022 Alphaproteobacteria Phenylobacterium sp. Root700 [LMHT] 308273 308189 - Leu TAG [ENA] ¡û
>W1710867674 LMIM01000001 Alphaproteobacteria Phenylobacterium sp. Root77 [LMIM] 187949 188033 + Leu TAG [ENA] ¡û
>W1711166959 LVVY01000065 Alphaproteobacteria Devosia elaeis S37 [LVVY] 33090 33006 - Leu TAG [ENA] ¡û
>W1711385191 MEDU01000205 Alphaproteobacteria Devosia sp. SCN 66-27 [MEDU] 327 243 - Leu TAG [ENA] ¡û
>W1711385854 MEET01000004 Alphaproteobacteria Pelagibacterium sp. SCN 63-126 [MEET] 231497 231581 + Leu TAG [ENA] ¡û
>W1711386006 MEEV01000017 Alphaproteobacteria Pelagibacterium sp. SCN 64-44 [MEEV] 85507 85423 - Leu TAG [ENA] ¡û
>W1711386053 MEEV01000062 Alphaproteobacteria Pelagibacterium sp. SCN 64-44 [MEEV] 28975 29059 + Leu TAG [ENA] ¡û
>W1711387092 MEGG01000039 Alphaproteobacteria Pelagibacterium sp. SCN 63-17 [MEGG] 6173 6257 + Leu TAG [ENA] ¡û
>W1711504820 MKUY01000003 Alphaproteobacteria Devosia sp. 63-57 [MKUY] 231509 231593 + Leu TAG [ENA] ¡û
>W1711504955 MKVB01000001 Alphaproteobacteria Devosia sp. 66-14 [MKVB] 470330 470246 - Leu TAG [ENA] ¡û
>W131221579 AUAO01000007 Alphaproteobacteria Brevundimonas aveniformis DSM 17977 [AUAO] 2217 2133 - Leu TAG [ENA] ¡û
>WENV180016328 FSUR01000068 [FSUR] metagenome; soil 4462 4546 + Leu TAG [ENA] ¢þ
>WENV180016435 FSUX01001562 [FSUX] metagenome; soil 207 123 - Leu TAG [ENA] ¢þ
>WENV180017429 FSWZ01000315 [FSWZ] metagenome; soil 139 55 - Leu TAG [ENA] ¢þ
>WENV180018782 FTAI01001562 [FTAI] metagenome; soil 5873 5957 + Leu TAG [ENA] ¢þ
>WENV180020083 FTCV01001594 [FTCV] metagenome; soil 15159 15243 + Leu TAG [ENA] ¢þ
>WENV180020740 FTDB01000777 [FTDB] metagenome; soil 9 93 + Leu TAG [ENA] ¢þ
>WENV180020857 FTDD01000114 [FTDD] metagenome; soil 4441 4525 + Leu TAG [ENA] ¢þ
>WENV180021584 FTES01000450 [FTES] metagenome; soil 2361 2445 + Leu TAG [ENA] ¢þ
>WENV180022021 FTFJ01000760 [FTFJ] metagenome; soil 176 92 - Leu TAG [ENA] ¢þ
>WENV180022925 FTHA01001183 [FTHA] metagenome; soil 8025 8109 + Leu TAG [ENA] ¢þ
>WENV180028066 FTIZ01650756 [FTIZ] metagenome; soil 1174 1258 + Leu TAG [ENA] ¢þ
>WENV180028150 FTJA01000297 [FTJA] metagenome; soil 4079 3995 - Leu TAG [ENA] ¢þ
>WENV180028151 FTJA01000297 [FTJA] metagenome; soil 3582 3498 - Leu TAG [ENA] ¢þ
>WENV180028526 FTJE01001394 [FTJE] metagenome; soil 8144 8060 - Leu TAG [ENA] ¢þ
>WENV180030430 FTJM01015450 [FTJM] metagenome; soil 89 5 - Leu TAG [ENA] ¢þ
>WENV180031362 FTJO01033435 [FTJO] metagenome; soil 242 158 - Leu TAG [ENA] ¢þ
>WENV180031975 FTJU01002276 [FTJU] metagenome; soil 9516 9600 + Leu TAG [ENA] ¢þ
>WENV180033968 FTKM01015983 [FTKM] metagenome; soil 1560 1476 - Leu TAG [ENA] ¢þ
>WENV180033969 FTKM01016181 [FTKM] metagenome; soil 32745 32829 + Leu TAG [ENA] ¢þ
>WENV180035081 FTKT01000980 [FTKT] metagenome; soil 4157 4241 + Leu TAG [ENA] ¢þ
>WENV180035464 FTKZ01020832 [FTKZ] metagenome; soil 132 216 + Leu TAG [ENA] ¢þ
>W141066782 ARYH01000002 Alphaproteobacteria Hyphomonas adhaerens MHS-3 [ARYH] 67738 67822 + Leu TAG [ENA] ¡û
>WENV180694151 OCZS012016654 [OCZS] soil metagenome; soil 91 175 + Leu TAG [ENA] ¢þ
>WENV181170564 OEIV010059087 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 277 193 - Leu TAG [ENA] ¢þ
>WENV181227456 OFDN01010992 [OFDN] hot springs metagenome; Water 577 493 - Leu TAG [ENA] ¢þ
>WENV181378438 OFRB01004801 [OFRB] wastewater metagenome; Exp Tend CN 0WW 482 566 + Leu TAG [ENA] ¢þ
>WENV182543979 OJBD01005359 [OJBD] seawater metagenome; Sea water 515 431 - Leu TAG [ENA] ¢þ
>WENV183697310 OUNJ010336899 [OUNJ] metagenome; soil 3083 2999 - Leu TAG [ENA] ¢þ
>WENV183726031 PJQF01063500 [PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm 310 394 + Leu TAG [ENA] ¢þ
>WENV183728659 PJTQ01000253 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 35103 35187 + Leu TAG [ENA] ¢þ
>WENV183729561 PJTQ01069417 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 395 311 - Leu TAG [ENA] ¢þ
>WENV183729961 PJTR01000243 [PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment 1421 1337 - Leu TAG [ENA] ¢þ
>WENV183731503 PJTT01000012 [PJTT] soil metagenome; Soil (2) enriched on wood chips 138987 139071 + Leu TAG [ENA] ¢þ
>WENV183732749 PJTX01010160 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 662 746 + Leu TAG [ENA] ¢þ
>WENV183734143 PJTZ01000090 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 74614 74530 - Leu TAG [ENA] ¢þ
>WENV183736975 PJUD01000153 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 5912 5996 + Leu TAG [ENA] ¢þ
>WENV183739943 PJUF01000086 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 77181 77097 - Leu TAG [ENA] ¢þ
>WENV183743651 PJUJ01014394 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 646 730 + Leu TAG [ENA] ¢þ
>WENV183743658 PJUJ01015427 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 720 636 - Leu TAG [ENA] ¢þ
>WENV183743700 PJUJ01025530 [PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment 331 415 + Leu TAG [ENA] ¢þ
>WENV183745086 PJUL01002146 [PJUL] feces metagenome; Chicken feces enriched on filter paper 2684 2768 + Leu TAG [ENA] ¢þ
>WENV183745192 PJUL01005005 [PJUL] feces metagenome; Chicken feces enriched on filter paper 1492 1576 + Leu TAG [ENA] ¢þ
>WENV170121479 CENM01030386 [CENM] marine metagenome genome assembly TARA_032_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 491 575 + Leu TAG [ENA] ¢þ
>WENV170201024 CEPP01049160 [CEPP] marine metagenome genome assembly TARA_042_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 349 265 - Leu TAG [ENA] ¢þ
>WENV170305413 CESI01143901 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 13 97 + Leu TAG [ENA] ¢þ
>WENV170574554 FLYM01058408 [FLYM] hot springs metagenome; Sediment 315 399 + Leu TAG [ENA] ¢þ
>WENV170706185 LNAP01001560 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1209 1125 - Leu TAG [ENA] ¢þ
>WENV170829124 MDSZ01003262 [MDSZ] marine metagenome; seawater 69159 69075 - Leu TAG [ENA] ¢þ
>WENV170922401 MDTG01030462 [MDTG] marine metagenome; seawater 3846 3762 - Leu TAG [ENA] ¢þ
>WENV170963435 MRWG01000183 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 66647 66731 + Leu TAG [ENA] ¢þ
>C181139135 CP026747 Alphaproteobacteria Devosia sp. I507 [CP026747] 3738131 3738215 + Leu TAG - ¡û
>C191130654 CP034767 Alphaproteobacteria Devosia sp. 1566 [CP034767] 1568648 1568732 + Leu TAG - ¡û
>C191159632 CP038440 Alphaproteobacteria Brevundimonas sp. MF30-B [CP038440] 1621207 1621123 - Leu TAG - ¡û
>C191189144 CP041243 Alphaproteobacteria Brevundimonas sp. M20 [CP041243] 1640031 1639947 - Leu TAG - ¡û
>W141739278 JNNO01000001 Alphaproteobacteria Devosia sp. LC5 [JNNO] 22837 22921 + Leu TAG [ENA] ¡û
>W1910725244 MGLK01000003 Alphaproteobacteria Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19 [MGLK] 278197 278113 - Leu TAG [ENA] ¡û
>W1911696609 QMEL01000005 Alphaproteobacteria Pelagibacterium sediminicola IMCC34151 [QMEL] 20604 20520 - Leu TAG [ENA] ¡û
>W1911737840 QTTA01000010 Alphaproteobacteria Brevundimonas halotolerans MCS24 [QTTA] 425237 425321 + Leu TAG [ENA] ¡û
>W1911738153 QUOQ01000003 Alphaproteobacteria Brevundimonas lutea NS26 [QUOQ] 236552 236468 - Leu TAG [ENA] ¡û
>W1810000948 BEWU01000003 Alphaproteobacteria Brevundimonas denitrificans TAR-002 [BEWU] 164906 164990 + Leu TAG [ENA] ¡û
>W1810426026 PYVW01000001 Alphaproteobacteria Devosia naphthalenivorans CM5-1 [PYVW] 244430 244514 + Leu TAG [ENA] ¡û
>W1810426200 PYVZ01000006 Alphaproteobacteria Devosia indica IO390501 [PYVZ] 79834 79918 + Leu TAG [ENA] ¡û
>W1810426318 PYWB01000011 Alphaproteobacteria Devosia submarina JCM 18935 [PYWB] 92654 92738 + Leu TAG [ENA] ¡û
>W1810576920 QENV01000008 Alphaproteobacteria Devosia sp. PTEAB7WZ [QENV] 146469 146553 + Leu TAG [ENA] ¡û
>W1810779228 QQNH01000007 Alphaproteobacteria Pelagibacterium lacus XYN52 [QQNH] 87164 87248 + Leu TAG [ENA] ¡û
>C151079194 CP011300 Alphaproteobacteria Devosia sp. H5989 [CP011300] 1507269 1507185 - Leu TAG [Ensembl] ¡û
>W1511489462 JWSY01000008 Alphaproteobacteria Brevundimonas nasdae TPW30 [JWSY] 4934 5018 + Leu TAG [ENA] ¡û
>W1511541954 JZEX01000157 Alphaproteobacteria Devosia geojensis BD-c194 [JZEX] 15117 15201 + Leu TAG [ENA] ¡û
>W1511541969 JZEY01000054 Alphaproteobacteria Devosia chinhatensis IPL18 [JZEY] 1470521 1470605 + Leu TAG [ENA] ¡û
>W1511568585 LAJE01000089 Alphaproteobacteria Devosia insulae DS-56 [LAJE] 63536 63452 - Leu TAG [ENA] ¡û
>W1511568618 LAJF01000091 Alphaproteobacteria Devosia limi DSM 17137 [LAJF] 78754 78838 + Leu TAG [ENA] ¡û
>W1511573957 LANJ01000012 Alphaproteobacteria Devosia epidermidihirudinis E84 [LANJ] 63540 63456 - Leu TAG [ENA] ¡û
>W1511576817 LAPV01000228 Alphaproteobacteria Devosia psychrophila Cr7-05 [LAPV] 60148 60232 + Leu TAG [ENA] ¡û
>C121005259 CP003075 Alphaproteobacteria Pelagibacterium halotolerans B2 [CP003075] 1496979 1496895 - Leu TAG [Ensembl] ¡û
>C161047042 CP012897 Alphaproteobacteria Brevundimonas sp. DS20 [CP012897] 2260415 2260499 + Leu TAG [Ensembl] ¡û
>C161047969 CP012945 Alphaproteobacteria Devosia sp. A16 [CP012945] 4756975 4756891 - Leu TAG - ¡û
>W1610649166 LJHU01000023 Alphaproteobacteria Brevundimonas sp. AAP58 [LJHU] 28085 28169 + Leu TAG [ENA] ¡û
>W1610722539 LMCR01000016 Alphaproteobacteria Devosia sp. Root105 [LMCR] 230929 230845 - Leu TAG [ENA] ¡û
>W1610724239 LMDZ01000004 Alphaproteobacteria Phenylobacterium sp. Root1277 [LMDZ] 218113 218197 + Leu TAG [ENA] ¡û
>W1610724314 LMEA01000011 Alphaproteobacteria Devosia sp. Root413D1 [LMEA] 10508 10424 - Leu TAG [ENA] ¡û
>W1610724332 LMEB01000004 Alphaproteobacteria Brevundimonas sp. Root1279 [LMEB] 326717 326801 + Leu TAG [ENA] ¡û
>W1610724510 LMEE01000001 Alphaproteobacteria Phenylobacterium sp. Root1290 [LMEE] 269270 269354 + Leu TAG [ENA] ¡û
>W1610724912 LMEM01000001 Alphaproteobacteria Devosia sp. Root436 [LMEM] 404896 404812 - Leu TAG [ENA] ¡û
>W1610726226 LMFL01000045 Alphaproteobacteria Brevundimonas sp. Root1423 [LMFL] 31803 31887 + Leu TAG [ENA] ¡û
>W1610728198 LMGZ01000021 Alphaproteobacteria Devosia sp. Root635 [LMGZ] 69109 69025 - Leu TAG [ENA] ¡û
>W1610729130 LMHT01000022 Alphaproteobacteria Phenylobacterium sp. Root700 [LMHT] 308273 308189 - Leu TAG [ENA] ¡û
>W1610730020 LMIM01000001 Alphaproteobacteria Phenylobacterium sp. Root77 [LMIM] 187949 188033 + Leu TAG [ENA] ¡û
>W1610977499 LVVY01000065 Alphaproteobacteria Devosia elaeis S37 [LVVY] 33090 33006 - Leu TAG [ENA] ¡û
>W1710084598 BDMM01000001 Alphaproteobacteria Brevundimonas sp. SH203 [BDMM] 153590 153674 + Leu TAG [ENA] ¡û
>W1710516656 FNCS01000005 Alphaproteobacteria Pelagibacterium luteolum [FNCS] 143240 143156 - Leu TAG [ENA] ¡û
>W1710533662 FNRH01000002 Alphaproteobacteria Pelagibacterium halotolerans H642 [FNRH] 152833 152749 - Leu TAG [ENA] ¡û
>W1710550648 FOFL01000004 Alphaproteobacteria Devosia sp. YR412 [FOFL] 90732 90648 - Leu TAG [ENA] ¡û
>W1710558664 FOMB01000008 Alphaproteobacteria Devosia psychrophila [FOMB] 5212 5128 - Leu TAG [ENA] ¡û
>W1710576179 FOZV01000002 Alphaproteobacteria Brevundimonas viscosa [FOZV] 263484 263400 - Leu TAG [ENA] ¡û
>W1710582165 FPKU01000001 Alphaproteobacteria Devosia enhydra [FPKU] 1208888 1208804 - Leu TAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK