This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.98231 (22 seq.)
>WENV181697230
OGPD01037976
[OGPD] human gut metagenome; faeces
711
629
-
Leu
GAG
[ENA]
¢þ
>WENV181710219
OGPN01035123
[OGPN] human gut metagenome; faeces
102
20
-
Leu
GAG
[ENA]
¢þ
>WENV181739125
OGQI01059286
[OGQI] human gut metagenome; faeces
713
629
-
Leu
GAG
[ENA]
¢þ
>WENV181924833
OGYL01050202
[OGYL] human gut metagenome; faeces
48
132
+
Leu
GAG
[ENA]
¢þ
>WENV182003745
OHBD01001256
[OHBD] human gut metagenome; feces
9194
9278
+
Leu
GAG
[ENA]
¢þ
>WENV182635542
OJKY01091274
[OJKY] metagenome; faeces
632
548
-
Leu
GAG
[ENA]
¢þ
>WENV182655877
OJMI01104462
[OJMI] human gut metagenome; feces
530
446
-
Leu
GAG
[ENA]
¢þ
>WENV182945907
OKVK01002264
[OKVK] human gut metagenome; human gut
7464
7380
-
Leu
GAG
[ENA]
¢þ
>WENV183163090
OLOW01005283
[OLOW] human gut metagenome; faeces
1073
989
-
Leu
GAG
[ENA]
¢þ
>WENV183190450
OLPR01000356
[OLPR] human gut metagenome; faeces
3352
3268
-
Leu
GAG
[ENA]
¢þ
>WENV183190735
OLPR01001558
[OLPR] human gut metagenome; faeces
14864
14782
-
Leu
GAG
[ENA]
¢þ
>WENV183221214
OLQL01002532
[OLQL] human gut metagenome; faeces
827
743
-
Leu
GAG
[ENA]
¢þ
>WENV183230734
OLQT01005355
[OLQT] human gut metagenome; faeces
5211
5295
+
Leu
GAG
[ENA]
¢þ
>WENV183315918
OLVS01001349
[OLVS] human gut metagenome; feces
3030
3114
+
Leu
GAG
[ENA]
¢þ
>WENV183342165
OLWN01002833
[OLWN] human gut metagenome; feces
4345
4429
+
Leu
GAG
[ENA]
¢þ
>C181115552
CP025286
Bacillota
Ethanoligenens harbinense YUAN-3 [CP025286]
1026270
1026354
+
Leu
GAG
-
¡û
>C191031555
CP025287
Bacillota
Ethanoligenens harbinense B49 [CP025287]
991445
991529
+
Leu
GAG
-
¡û
>C191031610
CP025288
Bacillota
Ethanoligenens harbinense X-29 [CP025288]
1026269
1026353
+
Leu
GAG
-
¡û
>C191072221
CP030278
Bacillota
Ethanoligenens harbinense W1 [CP030278]
1026266
1026350
+
Leu
GAG
-
¡û
>W10115302
ADJQ01000015
Bacillota
Ethanoligenens harbinense YUAN-3 [ADJQ]
14497
14413
-
Leu
GAG
[ENA]
¡û
>C11108748
CP002400
Bacillota
Ethanoligenens harbinense YUAN-3 [CP002400]
1026269
1026353
+
Leu
GAG
[Ensembl]
¡û
>W11118888
ADJQ01000015
Bacillota
Ethanoligenens harbinense YUAN-3 [ADJQ]
14497
14413
-
Leu
GAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK