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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.98868 (27 seq.)
>W1710809596
LKEQ01000006
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
170066
169983
-
Tyr
GTA
[ENA]
¡û
>W1711088477
LSYY01000116
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
26947
26864
-
Tyr
GTA
[ENA]
¡û
>W131242656
CAOH01000088
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
40124
40207
+
Tyr
GTA
[ENA]
¡û
>W1712108441
NJBR01000092
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
6401
6484
+
Tyr
GTA
[ENA]
¡û
>C026872
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
855216
855135
-
Tyr
GTA
[Ensembl]
¡û
>W141001016
ADHD01000046
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
583
500
-
Tyr
GTA
[ENA]
¡û
>WENV181405264
OGCC01011297
[OGCC] insect metagenome; haemolymph
427
508
+
Tyr
GTA
[ENA]
¢þ
>WENV181405321
OGCD01000566
[OGCD] insect metagenome; haemolymph
1989
2070
+
Tyr
GTA
[ENA]
¢þ
>WENV181406114
OGCF01001771
[OGCF] insect metagenome; haemolymph
1343
1262
-
Tyr
GTA
[ENA]
¢þ
>W141240207
CAGB01000008
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
5996
6079
+
Tyr
GTA
[ENA]
¡û
>C08011409
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
1251879
1251962
+
Tyr
GTA
[Ensembl]
¡û
>W09113847
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
477509
477592
+
Tyr
GTA
[ENA]
¡û
>C191074338
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
1047513
1047430
-
Tyr
GTA
-
¡û
>C191123120
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
187744
187661
-
Tyr
GTA
-
¡û
>C191123134
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
307435
307518
+
Tyr
GTA
-
¡û
>C191123168
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
307437
307520
+
Tyr
GTA
-
¡û
>W1910794375
MRWX01000056
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
296
213
-
Tyr
GTA
[ENA]
¡û
>W1911412166
NWVH01000097
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
5717
5800
+
Tyr
GTA
[ENA]
¡û
>W1911412205
NWVI01000121
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
5314
5397
+
Tyr
GTA
[ENA]
¡û
>W1510562620
CTEH01000101
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
262
345
+
Tyr
GTA
[ENA]
¡û
>W1511183973
JMCJ01000866
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
359
276
-
Tyr
GTA
[ENA]
¡û
>W1511536238
JYPC01000120
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
78025
77942
-
Tyr
GTA
[ENA]
¡û
>W11145957
AERW01000279
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
2972
3055
+
Tyr
GTA
[ENA]
¡û
>W11185751
CACK01000848
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
278
195
-
Tyr
GTA
[ENA]
¡û
>C131009123
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
911936
912019
+
Tyr
GTA
[Ensembl]
¡û
>W1610673702
LKEQ01000006
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
170066
169983
-
Tyr
GTA
[ENA]
¡û
>W1610923016
LSYY01000116
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
26947
26864
-
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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