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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Gut microbiome of Human (healthy human sample F1-T, Adult, Female)
Anticodon = AAG
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.89227 (94 seq.)
>WENV180279302
OBHX01027250
[OBHX] metagenome; feces
655
739
+
Leu
AAG
[ENA]
¢þ
>WENV180281454
OBIA01016669
[OBIA] human gut metagenome; human gut
548
632
+
Leu
AAG
[ENA]
¢þ
>WENV180336937
OBLG01008206
[OBLG] human gut metagenome; human gut
3038
2954
-
Leu
AAG
[ENA]
¢þ
>WENV180613367
OCPX01065714
[OCPX] human gut metagenome; human gut
231
315
+
Leu
AAG
[ENA]
¢þ
>WENV181350224
OFMO01004576
[OFMO] human gut metagenome; human gut
4696
4780
+
Leu
AAG
[ENA]
¢þ
>WENV181357745
OFMU01077798
[OFMU] human gut metagenome; human gut
450
534
+
Leu
AAG
[ENA]
¢þ
>WENV181362766
OFOK01023216
[OFOK] human gut metagenome; human gut
700
784
+
Leu
AAG
[ENA]
¢þ
>WENV181394311
OFRY01048675
[OFRY] human gut metagenome; human gut
423
507
+
Leu
AAG
[ENA]
¢þ
>WENV181398346
OFSD01066663
[OFSD] human gut metagenome; human gut
634
718
+
Leu
AAG
[ENA]
¢þ
>WENV181419017
OGCM01029362
[OGCM] human gut metagenome; human gut
1062
978
-
Leu
AAG
[ENA]
¢þ
>WENV181423253
OGCO01006186
[OGCO] human gut metagenome; human gut
1765
1849
+
Leu
AAG
[ENA]
¢þ
>WENV181437564
OGDF01153978
[OGDF] human gut metagenome; human gut
578
494
-
Leu
AAG
[ENA]
¢þ
>WENV181527492
OGHK01002417
[OGHK] metagenome; Human gut stool
12971
13055
+
Leu
AAG
[ENA]
¢þ
>WENV181533491
OGHR01001443
[OGHR] metagenome; Human gut stool
1314
1230
-
Leu
AAG
[ENA]
¢þ
>WENV181672217
OGON01030672
[OGON] human gut metagenome; faeces
605
521
-
Leu
AAG
[ENA]
¢þ
>WENV181712378
OGPP01041387
[OGPP] human gut metagenome; faeces
527
443
-
Leu
AAG
[ENA]
¢þ
>WENV181747360
OGQN01023429
[OGQN] human gut metagenome; faeces
203
119
-
Leu
AAG
[ENA]
¢þ
>WENV181764853
OGQY01000945
[OGQY] human gut metagenome; faeces
93
9
-
Leu
AAG
[ENA]
¢þ
>WENV181780968
OGRJ01006959
[OGRJ] human gut metagenome; faeces
20
104
+
Leu
AAG
[ENA]
¢þ
>WENV181787556
OGRN01065926
[OGRN] human gut metagenome; faeces
584
668
+
Leu
AAG
[ENA]
¢þ
>WENV181789823
OGRO01045407
[OGRO] human gut metagenome; faeces
268
184
-
Leu
AAG
[ENA]
¢þ
>WENV181830963
OGUO01019707
[OGUO] human gut metagenome; faeces
1984
1900
-
Leu
AAG
[ENA]
¢þ
>WENV181923181
OGYK01080360
[OGYK] human gut metagenome; faeces
157
73
-
Leu
AAG
[ENA]
¢þ
>WENV181981958
OHAG01012088
[OHAG] human gut metagenome; faeces
2181
2265
+
Leu
AAG
[ENA]
¢þ
>WENV181997946
OHAU01009724
[OHAU] human gut metagenome; faeces
2509
2425
-
Leu
AAG
[ENA]
¢þ
>WENV182027682
OHCN01008047
[OHCN] human gut metagenome; feces
267
351
+
Leu
AAG
[ENA]
¢þ
>WENV182203679
OHPP01054288
[OHPP] human gut metagenome; feces
632
548
-
Leu
AAG
[ENA]
¢þ
>WENV182290266
OHVX01009129
[OHVX] human gut metagenome; feces
530
446
-
Leu
AAG
[ENA]
¢þ
>WENV182299337
OHWK01001469
[OHWK] human gut metagenome; feces
6281
6197
-
Leu
AAG
[ENA]
¢þ
>WENV182352112
OIBI01006884
[OIBI] human gut metagenome; feces
254
170
-
Leu
AAG
[ENA]
¢þ
>WENV182363898
OICG01012376
[OICG] human gut metagenome; feces
123
39
-
Leu
AAG
[ENA]
¢þ
>WENV182390799
OIEE01036005
[OIEE] human gut metagenome; human gut
101
17
-
Leu
AAG
[ENA]
¢þ
>WENV182396415
OIEL01069105
[OIEL] human gut metagenome; human gut
496
580
+
Leu
AAG
[ENA]
¢þ
>WENV182397653
OIEM01086115
[OIEM] human gut metagenome; human gut
63
147
+
Leu
AAG
[ENA]
¢þ
>WENV182441418
OIKC01031465
[OIKC] human gut metagenome; human gut
407
491
+
Leu
AAG
[ENA]
¢þ
>WENV182519498
OIWP01016740
[OIWP] human gut metagenome; faeces
1375
1459
+
Leu
AAG
[ENA]
¢þ
>WENV182738543
OJQJ01027310
[OJQJ] human gut metagenome; stool sample
484
400
-
Leu
AAG
[ENA]
¢þ
>WENV182977936
OKYF01032615
[OKYF] human gut metagenome; human gut
126
210
+
Leu
AAG
[ENA]
¢þ
>WENV183013468
OLEF01039557
[OLEF] human gut metagenome; human gut
304
388
+
Leu
AAG
[ENA]
¢þ
>WENV183043564
OLGD01096181
[OLGD] human gut metagenome; faeces
476
560
+
Leu
AAG
[ENA]
¢þ
>WENV183073348
OLIT01041878
[OLIT] human gut metagenome; feces
925
841
-
Leu
AAG
[ENA]
¢þ
>WENV183094287
OLNC01001506
[OLNC] human gut metagenome; faeces
89
173
+
Leu
AAG
[ENA]
¢þ
>WENV183096065
OLND01014020
[OLND] human gut metagenome; faeces
213
129
-
Leu
AAG
[ENA]
¢þ
>WENV183100259
OLNF01083703
[OLNF] human gut metagenome; faeces
539
623
+
Leu
AAG
[ENA]
¢þ
>WENV183118350
OLNS01009245
[OLNS] human gut metagenome; faeces
3119
3203
+
Leu
AAG
[ENA]
¢þ
>WENV183120075
OLNU01000371
[OLNU] human gut metagenome; faeces
43886
43802
-
Leu
AAG
[ENA]
¢þ
>WENV183122924
OLNW01000106
[OLNW] human gut metagenome; faeces
24188
24104
-
Leu
AAG
[ENA]
¢þ
>WENV183122925
OLNW01000106
[OLNW] human gut metagenome; faeces
23972
23888
-
Leu
AAG
[ENA]
¢þ
>WENV183126983
OLNY01073336
[OLNY] human gut metagenome; faeces
672
756
+
Leu
AAG
[ENA]
¢þ
>WENV183128356
OLNZ01005286
[OLNZ] human gut metagenome; faeces
6135
6051
-
Leu
AAG
[ENA]
¢þ
>WENV183130820
OLOA01005856
[OLOA] human gut metagenome; faeces
6752
6668
-
Leu
AAG
[ENA]
¢þ
>WENV183132733
OLOB01006165
[OLOB] human gut metagenome; faeces
692
605
-
Leu
AAG
[ENA]
¢þ
>WENV183135146
OLOD01029796
[OLOD] human gut metagenome; faeces
194
110
-
Leu
AAG
[ENA]
¢þ
>WENV183137288
OLOG01003034
[OLOG] human gut metagenome; faeces
5286
5370
+
Leu
AAG
[ENA]
¢þ
>WENV183138221
OLOH01001343
[OLOH] human gut metagenome; faeces
14159
14075
-
Leu
AAG
[ENA]
¢þ
>WENV183139073
OLOI01000016
[OLOI] human gut metagenome; faeces
86541
86457
-
Leu
AAG
[ENA]
¢þ
>WENV183147224
OLON01000019
[OLON] human gut metagenome; faeces
93462
93378
-
Leu
AAG
[ENA]
¢þ
>WENV183148612
OLOO01000155
[OLOO] human gut metagenome; faeces
36960
36876
-
Leu
AAG
[ENA]
¢þ
>WENV183148613
OLOO01000155
[OLOO] human gut metagenome; faeces
36743
36659
-
Leu
AAG
[ENA]
¢þ
>WENV183151885
OLOQ01001086
[OLOQ] human gut metagenome; faeces
10171
10255
+
Leu
AAG
[ENA]
¢þ
>WENV183154714
OLOR01010838
[OLOR] human gut metagenome; faeces
3734
3650
-
Leu
AAG
[ENA]
¢þ
>WENV183167610
OLOZ01000427
[OLOZ] human gut metagenome; faeces
28554
28638
+
Leu
AAG
[ENA]
¢þ
>WENV183167611
OLOZ01000427
[OLOZ] human gut metagenome; faeces
28770
28854
+
Leu
AAG
[ENA]
¢þ
>WENV183175278
OLPF01000129
[OLPF] human gut metagenome; faeces
29325
29241
-
Leu
AAG
[ENA]
¢þ
>WENV183177786
OLPG01005037
[OLPG] human gut metagenome; faeces
6743
6827
+
Leu
AAG
[ENA]
¢þ
>WENV183181835
OLPI01023465
[OLPI] human gut metagenome; faeces
504
588
+
Leu
AAG
[ENA]
¢þ
>WENV183185637
OLPN01017243
[OLPN] human gut metagenome; faeces
1650
1734
+
Leu
AAG
[ENA]
¢þ
>WENV183190014
OLPQ01041099
[OLPQ] human gut metagenome; faeces
411
495
+
Leu
AAG
[ENA]
¢þ
>WENV183196463
OLPU01001010
[OLPU] human gut metagenome; faeces
22353
22437
+
Leu
AAG
[ENA]
¢þ
>WENV183201062
OLPW01009900
[OLPW] human gut metagenome; faeces
4731
4647
-
Leu
AAG
[ENA]
¢þ
>WENV183206804
OLQA01002865
[OLQA] human gut metagenome; faeces
12803
12887
+
Leu
AAG
[ENA]
¢þ
>WENV183211139
OLQC01020656
[OLQC] human gut metagenome; faeces
1991
2075
+
Leu
AAG
[ENA]
¢þ
>WENV183215693
OLQG01008955
[OLQG] human gut metagenome; faeces
2440
2356
-
Leu
AAG
[ENA]
¢þ
>WENV183219679
OLQK01000788
[OLQK] human gut metagenome; faeces
5717
5633
-
Leu
AAG
[ENA]
¢þ
>WENV183226897
OLQO01031351
[OLQO] human gut metagenome; faeces
267
183
-
Leu
AAG
[ENA]
¢þ
>WENV183228975
OLQR01022820
[OLQR] human gut metagenome; faeces
153
69
-
Leu
AAG
[ENA]
¢þ
>WENV183230803
OLQT01008366
[OLQT] human gut metagenome; faeces
33
117
+
Leu
AAG
[ENA]
¢þ
>WENV183232758
OLQV01000012
[OLQV] human gut metagenome; faeces
129139
129055
-
Leu
AAG
[ENA]
¢þ
>WENV183237678
OLQY01001083
[OLQY] human gut metagenome; faeces
14269
14185
-
Leu
AAG
[ENA]
¢þ
>WENV183240320
OLRA01005369
[OLRA] human gut metagenome; faeces
2022
2106
+
Leu
AAG
[ENA]
¢þ
>WENV183245461
OLRE01003563
[OLRE] human gut metagenome; faeces
7497
7413
-
Leu
AAG
[ENA]
¢þ
>WENV183248923
OLRG01000432
[OLRG] human gut metagenome; faeces
10537
10621
+
Leu
AAG
[ENA]
¢þ
>WENV183255054
OLRJ01046580
[OLRJ] human gut metagenome; faeces
18
102
+
Leu
AAG
[ENA]
¢þ
>WENV183265534
OLRS01018078
[OLRS] human gut metagenome; faeces
111
27
-
Leu
AAG
[ENA]
¢þ
>WENV183284283
OLSD01010354
[OLSD] human gut metagenome; faeces
1444
1360
-
Leu
AAG
[ENA]
¢þ
>WENV183377279
OLYB01010991
[OLYB] human gut metagenome; feces
3810
3726
-
Leu
AAG
[ENA]
¢þ
>WENV183520760
OMNT01061349
[OMNT] human gut metagenome; faeces
747
663
-
Leu
AAG
[ENA]
¢þ
>WENV183603483
OODK01008988
[OODK] human gut metagenome; human gut
1286
1202
-
Leu
AAG
[ENA]
¢þ
>W1810904825
QVEP01000062
Bacillota
Coprococcus catus AF45-17 [QVEP]
1691
1775
+
Leu
AAG
[ENA]
¡û
>W1810905531
QVFD01000001
Bacillota
Coprococcus catus AM28-39 [QVFD]
131369
131285
-
Leu
AAG
[ENA]
¡û
>W1810905532
QVFD01000001
Bacillota
Coprococcus catus AM28-39 [QVFD]
131163
131079
-
Leu
AAG
[ENA]
¡û
>C161103202
FP929038
Bacillota
Coprococcus catus GD/7 [FP929038]
3387798
3387882
+
Leu
AAG
-
¡û
>C161103203
FP929038
Bacillota
Coprococcus catus GD/7 [FP929038]
3388000
3388084
+
Leu
AAG
-
¡û
>WENV082466
BAAV01011575
Gut microbiome of Human (healthy human sample F1-T, Adult, Female)
216
129
-
Leu
AAG
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK