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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Podoviridae
Anticodon = ACG
HIT:
7 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.504370 (3 seq.)
>PHG182000017
KT962245
Podoviridae
Cellulophaga phage phi4:1_13 (KT962245)
87871
87944
+
Arg
ACG
[ENA]
¡û
>PHG182000018
KT962246
Podoviridae
Cellulophaga phage phi4:1_18 (KT962246)
87871
87944
+
Arg
ACG
[ENA]
¡û
>PHG14102335
KC821632
Podoviridae
Cellulophaga phage phi4:1 (KC821632)
87871
87944
+
Arg
ACG
[ENA]
¡û
Identical group No.536304 (2 seq.)
>PHG182000019
KT962247
Podoviridae
Cellulophaga phage phi17:2_18 (KT962247)
88324
88397
+
Arg
ACG
[ENA]
¡û
>PHG14102288
KC821609
Podoviridae
Cellulophaga phage phi17:2 (KC821609)
88324
88397
+
Arg
ACG
[ENA]
¡û
Identical group No.684263 (6 seq.)
>PHG181006840
MG518520
Podoviridae
Streptomyces phage Immanuel3 (MG518520)
17329
17401
+
Arg
ACG
[ENA]
¡û
>PHG181007070
MG663582
Podoviridae
Streptomyces phage HaugeAnator (MG663582)
17325
17397
+
Arg
ACG
[ENA]
¡û
>PHG181007084
MG663583
Podoviridae
Streptomyces phage Percastrophe (MG663583)
17319
17393
+
Arg
ACG
[ENA]
¡û
>PHG181007098
MG663584
Podoviridae
Streptomyces phage Romero (MG663584)
17318
17390
+
Arg
ACG
[ENA]
¡û
>PHG181007112
MG663585
Podoviridae
Streptomyces phage ToriToki (MG663585)
17318
17390
+
Arg
ACG
[ENA]
¡û
>PHG181007126
MG663586
Podoviridae
Streptomyces phage ZooBear (MG663586)
17325
17397
+
Arg
ACG
[ENA]
¡û
Identical group No.719297 (1 seq.)
>PHG181007834
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
17643
17715
+
Arg
ACG
[ENA]
¡û
Identical group No.734100 (2 seq.)
>PHG14102311
KC821612
Podoviridae
Cellulophaga phage phi40:1 (KC821612)
38717
38789
+
Arg
ACG
[ENA]
¡û
>PHG14102324
KC821614
Podoviridae
Cellulophaga phage phi38:1 (KC821614)
38721
38793
+
Arg
ACG
[ENA]
¡û
Identical group No.755899 (1 seq.)
>PHG181006812
MG515223
Podoviridae
Streptomyces phage WRightOn (MG515223)
17890
17964
+
Arg
ACG
[ENA]
¡û
Identical group No.755903 (1 seq.)
>PHG181006826
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
17637
17709
+
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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