tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001803)

Anticodon = CGG

HIT: 23 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.235072 (4 seq.)
>WENV170611826 FUWD012410942 [FUWD] metagenome; unknown 251 327 + Pro CGG [ENA] ¢þ
>SRA1017397 SRR035082.132942 454 Sequencing (SRP001803) 59 137 + Pro CGG [SRA]
>SRA1017776 SRR035082.194704 454 Sequencing (SRP001803) 202 126 - Pro CGG [SRA]
>SRA1025558 SRR035085.39317 454 Sequencing (SRP001806) 264 340 + Pro CGG [SRA]
Identical group No.240138 (1 seq.)
>SRA1018179 SRR035082.252084 454 Sequencing (SRP001803) 178 100 - Pro CGG [SRA]
Identical group No.240945 (5 seq.)
>WENV170622783 FUWD013121054 [FUWD] metagenome; unknown 190 267 + Pro CGG [ENA] ¢þ
>WENV170630996 FUWD013334809 [FUWD] metagenome; unknown 190 267 + Pro CGG [ENA] ¢þ
>SRA1018006 SRR035082.226832 454 Sequencing (SRP001803) 150 227 + Pro CGG [SRA]
>SRA1019288 SRR035082.429233 454 Sequencing (SRP001803) 427 350 - Pro CGG [SRA]
>SRA1036774 SRR035089.612403 454 Sequencing (SRP001810) 241 164 - Pro CGG [SRA]
Identical group No.268418 (1 seq.)
>SRA1017672 SRR035082.178318 454 Sequencing (SRP001803) 325 250 - Pro CGG [SRA]
Identical group No.268434 (1 seq.)
>SRA1018283 SRR035082.268837 454 Sequencing (SRP001803) 117 192 + Pro CGG [SRA]
Identical group No.268462 (1 seq.)
>SRA1019164 SRR035082.412273 454 Sequencing (SRP001803) 211 134 - Pro CGG [SRA]
Identical group No.272357 (2 seq.)
>SRA1018958 SRR035082.376173 454 Sequencing (SRP001803) 273 347 + Pro CGG [SRA]
>SRA1026107 SRR035085.144892 454 Sequencing (SRP001806) 59 133 + Pro CGG [SRA]
Identical group No.272663 (4 seq.)
>WENV170605148 FUWD010454466 [FUWD] metagenome; unknown 535 462 - Pro CGG [ENA] ¢þ
>SRA1019750 SRR035082.519079 454 Sequencing (SRP001803) 275 202 - Pro CGG [SRA]
>SRA1034987 SRR035089.211148 454 Sequencing (SRP001810) 107 34 - Pro CGG [SRA]
>SRA1048168 SRR035094.121393 454 Sequencing (SRP001815) 63 136 + Pro CGG [SRA]
Identical group No.272733 (16 seq.)
>W131192556 ASLT01000002 Atribacterota Atribacteria bacterium SCGC AAA255-E04 OP9 bacterium SCGC AAA255-E04 [ASLT] 7344 7268 - Pro CGG [ENA] ¡û
>W131193754 ASPA01000002 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 3627 3703 + Pro CGG [ENA] ¡û
>WENV183514295 OMKS01015436 [OMKS] sediment metagenome; hot spring sediment 3836 3760 - Pro CGG [ENA] ¢þ
>WENV170017236 BART01003063 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 376 452 + Pro CGG [ENA] ¢þ
>WENV170017721 BARU01018147 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 23 99 + Pro CGG [ENA] ¢þ
>WENV170018401 BARW01009198 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 886 962 + Pro CGG [ENA] ¢þ
>WENV170603130 FUWD010290274 [FUWD] metagenome; unknown 531 455 - Pro CGG [ENA] ¢þ
>WENV170692570 LGOV01014691 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 138 214 + Pro CGG [ENA] ¢þ
>WENV170693561 LGVC01021987 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 2406 2482 + Pro CGG [ENA] ¢þ
>WENV170694392 LGVD01045010 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 854 778 - Pro CGG [ENA] ¢þ
>WENV170695670 LGVE01150161 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 198 274 + Pro CGG [ENA] ¢þ
>WENV170697841 LGVF01206112 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 77 1 - Pro CGG [ENA] ¢þ
>SRA1019422 SRR035082.454500 454 Sequencing (SRP001803) 310 234 - Pro CGG [SRA]
>SRA1030833 SRR035087.336337 454 Sequencing (SRP001808) 90 166 + Pro CGG [SRA]
>SRA1035400 SRR035089.298546 454 Sequencing (SRP001810) 357 433 + Pro CGG [SRA]
>SRA1036120 SRR035089.448829 454 Sequencing (SRP001810) 324 248 - Pro CGG [SRA]
Identical group No.300614 (2 seq.)
>SRA1019496 SRR035082.466922 454 Sequencing (SRP001803) 148 74 - Pro CGG [SRA]
>SRA1031080 SRR035087.369916 454 Sequencing (SRP001808) 480 406 - Pro CGG [SRA]
Identical group No.357709 (2 seq.)
>WENV170603387 FUWD010307219 [FUWD] metagenome; unknown 77 1 - Pro CGG [ENA] ¢þ
>SRA1019331 SRR035082.436938 454 Sequencing (SRP001803) 95 19 - Pro CGG [SRA]
Identical group No.358667 (5 seq.)
>WENV170621051 FUWD013047704 [FUWD] metagenome; unknown 859 935 + Pro CGG [ENA] ¢þ
>WENV170629216 FUWD013264510 [FUWD] metagenome; unknown 859 935 + Pro CGG [ENA] ¢þ
>SRA1019778 SRR035082.529722 454 Sequencing (SRP001803) 95 171 + Pro CGG [SRA]
>SRA1023992 SRR035084.223742 454 Sequencing (SRP001805) 111 187 + Pro CGG [SRA]
>SRA1053276 SRR035098.371884 454 Sequencing (SRP001819) 206 282 + Pro CGG [SRA]
Identical group No.439672 (1 seq.)
>SRA1017081 SRR035082.76958 454 Sequencing (SRP001803) 301 377 + Pro CGG [SRA]
Identical group No.439750 (1 seq.)
>SRA1018020 SRR035082.227796 454 Sequencing (SRP001803) 366 442 + Pro CGG [SRA]
Identical group No.439772 (1 seq.)
>SRA1018252 SRR035082.263050 454 Sequencing (SRP001803) 118 42 - Pro CGG [SRA]
Identical group No.439810 (1 seq.)
>SRA1018530 SRR035082.304969 454 Sequencing (SRP001803) 437 511 + Pro CGG [SRA]
Identical group No.439882 (1 seq.)
>SRA1019289 SRR035082.429633 454 Sequencing (SRP001803) 90 14 - Pro CGG [SRA]
Identical group No.453807 (110 seq.)
>W1711167300 LVWG01000018 Chlorobiota Pelodictyon luteolum [LVWG] 66695 66622 - Pro CGG [ENA] ¡û
>C016760 CP000096 Chlorobiota Pelodictyon luteolum DSM 273 [CP000096] 1450910 1450838 - Pro CGG [Ensembl] ¡û
>C018273 CP000607 Chlorobiota Chlorobium phaeovibrioides [CP000607] 1162363 1162288 - Pro CGG [Ensembl] ¡û
>WENV183812097 PYLN01000012 [PYLN] freshwater metagenome; meromictic lake 22232 22159 - Pro CGG [ENA] ¢þ
>WENV170613669 FUWD012816079 [FUWD] metagenome; unknown 11659 11732 + Pro CGG [ENA] ¢þ
>WENV170614045 FUWD012824125 [FUWD] metagenome; unknown 12150 12223 + Pro CGG [ENA] ¢þ
>WENV170614046 FUWD012824126 [FUWD] metagenome; unknown 148 221 + Pro CGG [ENA] ¢þ
>W09103341 AAJD01000001 Chlorobiota Chlorobium phaeovibrioides DSM 265 [AAJD] 159437 159362 - Pro CGG [ENA] ¡û
>SRA1016888 SRR035082.47881 454 Sequencing (SRP001803) 116 189 + Pro CGG [SRA]
>SRA1016909 SRR035082.50899 454 Sequencing (SRP001803) 170 97 - Pro CGG [SRA]
>SRA1019892 SRR035083.16801 454 Sequencing (SRP001804) 425 352 - Pro CGG [SRA]
>SRA1019991 SRR035083.37666 454 Sequencing (SRP001804) 51 126 + Pro CGG [SRA]
>SRA1020081 SRR035083.55369 454 Sequencing (SRP001804) 112 39 - Pro CGG [SRA]
>SRA1020131 SRR035083.60883 454 Sequencing (SRP001804) 187 260 + Pro CGG [SRA]
>SRA1020134 SRR035083.61071 454 Sequencing (SRP001804) 264 337 + Pro CGG [SRA]
>SRA1020194 SRR035083.71740 454 Sequencing (SRP001804) 466 393 - Pro CGG [SRA]
>SRA1020233 SRR035083.78964 454 Sequencing (SRP001804) 480 407 - Pro CGG [SRA]
>SRA1020528 SRR035083.130659 454 Sequencing (SRP001804) 190 117 - Pro CGG [SRA]
>SRA1020638 SRR035083.145437 454 Sequencing (SRP001804) 433 360 - Pro CGG [SRA]
>SRA1020759 SRR035083.160179 454 Sequencing (SRP001804) 523 450 - Pro CGG [SRA]
>SRA1020852 SRR035083.173092 454 Sequencing (SRP001804) 158 85 - Pro CGG [SRA]
>SRA1020912 SRR035083.183841 454 Sequencing (SRP001804) 158 85 - Pro CGG [SRA]
>SRA1021024 SRR035083.199199 454 Sequencing (SRP001804) 93 166 + Pro CGG [SRA]
>SRA1021084 SRR035083.206128 454 Sequencing (SRP001804) 159 86 - Pro CGG [SRA]
>SRA1021360 SRR035083.249816 454 Sequencing (SRP001804) 198 125 - Pro CGG [SRA]
>SRA1021377 SRR035083.252808 454 Sequencing (SRP001804) 114 187 + Pro CGG [SRA]
>SRA1021396 SRR035083.254039 454 Sequencing (SRP001804) 104 177 + Pro CGG [SRA]
>SRA1021484 SRR035083.264744 454 Sequencing (SRP001804) 93 166 + Pro CGG [SRA]
>SRA1021598 SRR035083.278813 454 Sequencing (SRP001804) 191 118 - Pro CGG [SRA]
>SRA1021655 SRR035083.287624 454 Sequencing (SRP001804) 381 454 + Pro CGG [SRA]
>SRA1021716 SRR035083.296557 454 Sequencing (SRP001804) 105 178 + Pro CGG [SRA]
>SRA1021792 SRR035083.310429 454 Sequencing (SRP001804) 259 332 + Pro CGG [SRA]
>SRA1021810 SRR035083.312606 454 Sequencing (SRP001804) 343 416 + Pro CGG [SRA]
>SRA1021857 SRR035083.319123 454 Sequencing (SRP001804) 291 218 - Pro CGG [SRA]
>SRA1021859 SRR035083.319341 454 Sequencing (SRP001804) 264 191 - Pro CGG [SRA]
>SRA1021959 SRR035083.332170 454 Sequencing (SRP001804) 191 118 - Pro CGG [SRA]
>SRA1021995 SRR035083.336030 454 Sequencing (SRP001804) 166 239 + Pro CGG [SRA]
>SRA1022005 SRR035083.338443 454 Sequencing (SRP001804) 381 454 + Pro CGG [SRA]
>SRA1022051 SRR035083.346349 454 Sequencing (SRP001804) 172 245 + Pro CGG [SRA]
>SRA1022057 SRR035083.346672 454 Sequencing (SRP001804) 451 378 - Pro CGG [SRA]
>SRA1022152 SRR035083.359811 454 Sequencing (SRP001804) 433 360 - Pro CGG [SRA]
>SRA1022234 SRR035083.372330 454 Sequencing (SRP001804) 15 88 + Pro CGG [SRA]
>SRA1022419 SRR035083.403606 454 Sequencing (SRP001804) 329 256 - Pro CGG [SRA]
>SRA1022558 SRR035083.423683 454 Sequencing (SRP001804) 250 177 - Pro CGG [SRA]
>SRA1022678 SRR035083.440579 454 Sequencing (SRP001804) 87 14 - Pro CGG [SRA]
>SRA1022705 SRR035083.444502 454 Sequencing (SRP001804) 220 147 - Pro CGG [SRA]
>SRA1022849 SRR035083.473078 454 Sequencing (SRP001804) 50 123 + Pro CGG [SRA]
>SRA1022877 SRR035083.477003 454 Sequencing (SRP001804) 170 97 - Pro CGG [SRA]
>SRA1022894 SRR035083.480252 454 Sequencing (SRP001804) 219 146 - Pro CGG [SRA]
>SRA1023011 SRR035083.504277 454 Sequencing (SRP001804) 262 337 + Pro CGG [SRA]
>SRA1023038 SRR035083.510134 454 Sequencing (SRP001804) 419 346 - Pro CGG [SRA]
>SRA1032485 SRR035088.23785 454 Sequencing (SRP001809) 64 137 + Pro CGG [SRA]
>SRA1032725 SRR035088.87553 454 Sequencing (SRP001809) 188 261 + Pro CGG [SRA]
>SRA1032969 SRR035088.141594 454 Sequencing (SRP001809) 258 185 - Pro CGG [SRA]
>SRA1036152 SRR035089.456956 454 Sequencing (SRP001810) 328 401 + Pro CGG [SRA]
>SRA1037255 SRR035090.103454 454 Sequencing (SRP001811) 316 243 - Pro CGG [SRA]
>SRA1037279 SRR035090.106512 454 Sequencing (SRP001811) 62 135 + Pro CGG [SRA]
>SRA1037331 SRR035090.117293 454 Sequencing (SRP001811) 246 320 + Pro CGG [SRA]
>SRA1037395 SRR035090.127997 454 Sequencing (SRP001811) 194 267 + Pro CGG [SRA]
>SRA1037546 SRR035090.151441 454 Sequencing (SRP001811) 317 244 - Pro CGG [SRA]
>SRA1037611 SRR035090.163218 454 Sequencing (SRP001811) 98 171 + Pro CGG [SRA]
>SRA1037676 SRR035090.172947 454 Sequencing (SRP001811) 195 268 + Pro CGG [SRA]
>SRA1037680 SRR035090.173477 454 Sequencing (SRP001811) 241 314 + Pro CGG [SRA]
>SRA1037727 SRR035090.181223 454 Sequencing (SRP001811) 147 74 - Pro CGG [SRA]
>SRA1037731 SRR035090.181730 454 Sequencing (SRP001811) 414 341 - Pro CGG [SRA]
>SRA1037746 SRR035090.187038 454 Sequencing (SRP001811) 516 443 - Pro CGG [SRA]
>SRA1037848 SRR035090.204588 454 Sequencing (SRP001811) 146 73 - Pro CGG [SRA]
>SRA1038128 SRR035090.249948 454 Sequencing (SRP001811) 141 68 - Pro CGG [SRA]
>SRA1038316 SRR035090.285968 454 Sequencing (SRP001811) 170 243 + Pro CGG [SRA]
>SRA1038347 SRR035090.289974 454 Sequencing (SRP001811) 140 67 - Pro CGG [SRA]
>SRA1038362 SRR035090.291737 454 Sequencing (SRP001811) 21 94 + Pro CGG [SRA]
>SRA1038367 SRR035090.292215 454 Sequencing (SRP001811) 356 283 - Pro CGG [SRA]
>SRA1038545 SRR035090.325249 454 Sequencing (SRP001811) 354 427 + Pro CGG [SRA]
>SRA1038610 SRR035090.336214 454 Sequencing (SRP001811) 309 236 - Pro CGG [SRA]
>SRA1038625 SRR035090.338776 454 Sequencing (SRP001811) 170 243 + Pro CGG [SRA]
>SRA1038689 SRR035090.350279 454 Sequencing (SRP001811) 141 68 - Pro CGG [SRA]
>SRA1039030 SRR035090.410699 454 Sequencing (SRP001811) 229 156 - Pro CGG [SRA]
>SRA1039077 SRR035090.420535 454 Sequencing (SRP001811) 221 294 + Pro CGG [SRA]
>SRA1039156 SRR035090.433214 454 Sequencing (SRP001811) 157 230 + Pro CGG [SRA]
>SRA1039202 SRR035090.442685 454 Sequencing (SRP001811) 139 66 - Pro CGG [SRA]
>SRA1039287 SRR035090.458695 454 Sequencing (SRP001811) 171 244 + Pro CGG [SRA]
>SRA1039289 SRR035090.459451 454 Sequencing (SRP001811) 30 103 + Pro CGG [SRA]
>SRA1039296 SRR035090.460955 454 Sequencing (SRP001811) 170 243 + Pro CGG [SRA]
>SRA1039311 SRR035090.464945 454 Sequencing (SRP001811) 170 243 + Pro CGG [SRA]
>SRA1039347 SRR035090.473552 454 Sequencing (SRP001811) 211 138 - Pro CGG [SRA]
>SRA1039365 SRR035090.478995 454 Sequencing (SRP001811) 258 331 + Pro CGG [SRA]
>SRA1039396 SRR035090.483090 454 Sequencing (SRP001811) 38 111 + Pro CGG [SRA]
>SRA1039445 SRR035090.493370 454 Sequencing (SRP001811) 9 82 + Pro CGG [SRA]
>SRA1039453 SRR035090.495547 454 Sequencing (SRP001811) 30 103 + Pro CGG [SRA]
>SRA1039528 SRR035090.509061 454 Sequencing (SRP001811) 57 130 + Pro CGG [SRA]
>SRA1039611 SRR035090.529310 454 Sequencing (SRP001811) 22 95 + Pro CGG [SRA]
>SRA1039656 SRR035090.537596 454 Sequencing (SRP001811) 45 118 + Pro CGG [SRA]
>SRA1039689 SRR035090.546000 454 Sequencing (SRP001811) 223 150 - Pro CGG [SRA]
>SRA1039726 SRR035090.554305 454 Sequencing (SRP001811) 21 94 + Pro CGG [SRA]
>SRA1039873 SRR035090.588790 454 Sequencing (SRP001811) 309 236 - Pro CGG [SRA]
>SRA1039888 SRR035090.592906 454 Sequencing (SRP001811) 212 285 + Pro CGG [SRA]
>SRA1039913 SRR035090.600864 454 Sequencing (SRP001811) 188 261 + Pro CGG [SRA]
>SRA1039965 SRR035090.615230 454 Sequencing (SRP001811) 169 243 + Pro CGG [SRA]
>SRA1045277 SRR035093.51815 454 Sequencing (SRP001814) 61 134 + Pro CGG [SRA]
>SRA1050583 SRR035095.296534 454 Sequencing (SRP001816) 82 155 + Pro CGG [SRA]
>SRA1053543 SRR035098.433512 454 Sequencing (SRP001819) 82 155 + Pro CGG [SRA]
>SRA1053807 SRR035098.501458 454 Sequencing (SRP001819) 82 155 + Pro CGG [SRA]
>SRA1054104 SRR035099.57663 454 Sequencing (SRP001820) 158 85 - Pro CGG [SRA]
>SRA1054166 SRR035099.74421 454 Sequencing (SRP001820) 503 430 - Pro CGG [SRA]
>SRA1054386 SRR035099.120700 454 Sequencing (SRP001820) 117 44 - Pro CGG [SRA]
>SRA1054441 SRR035099.133547 454 Sequencing (SRP001820) 203 130 - Pro CGG [SRA]
>SRA1054602 SRR035099.171058 454 Sequencing (SRP001820) 238 311 + Pro CGG [SRA]
>SRA1054635 SRR035099.180282 454 Sequencing (SRP001820) 255 182 - Pro CGG [SRA]
>SRA1054640 SRR035099.181264 454 Sequencing (SRP001820) 453 380 - Pro CGG [SRA]
>W1610977631 LVWG01000018 Chlorobiota Pelodictyon luteolum [LVWG] 66695 66622 - Pro CGG [ENA] ¡û
Identical group No.672628 (5 seq.)
>WENV170600690 FUWD010138174 [FUWD] metagenome; unknown 145 71 - Pro CGG [ENA] ¢þ
>WENV170626970 FUWD013230564 [FUWD] metagenome; unknown 779 705 - Pro CGG [ENA] ¢þ
>SRA1019085 SRR035082.399022 454 Sequencing (SRP001803) 354 428 + Pro CGG [SRA]
>SRA1032072 SRR035087.545819 454 Sequencing (SRP001808) 88 162 + Pro CGG [SRA]
>SRA1041523 SRR035091.255387 454 Sequencing (SRP001812) 137 63 - Pro CGG [SRA]
Identical group No.711028 (2 seq.)
>WENV170611611 FUWD012357544 [FUWD] metagenome; unknown 223 152 - Pro CGG [ENA] ¢þ
>SRA1018436 SRR035082.291360 454 Sequencing (SRP001803) 309 238 - Pro CGG [SRA]
Identical group No.771119 (1 seq.)
>SRA1017197 SRR035082.96829 454 Sequencing (SRP001803) 53 124 + Pro CGG [SRA]
Identical group No.833538 (1 seq.)
>SRA1017965 SRR035082.222493 454 Sequencing (SRP001803) 91 162 + Pro CGG [SRA]
Identical group No.833609 (1 seq.)
>SRA1019356 SRR035082.441474 454 Sequencing (SRP001803) 1 72 + Pro CGG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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