tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001803)

Anticodon = TCG

HIT: 32 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.268471 (1 seq.)
>SRA1019504 SRR035082.467619 454 Sequencing (SRP001803) 221 144 - Arg TCG [SRA]
Identical group No.272449 (23 seq.)
>WENV181413199 OGCK01038251 [OGCK] hot springs metagenome; hot spring sediment 853 929 + Arg TCG [ENA] ¢þ
>WENV170616588 FUWD012892690 [FUWD] metagenome; unknown 15 91 + Arg TCG [ENA] ¢þ
>WENV170617548 FUWD012929501 [FUWD] metagenome; unknown 109 185 + Arg TCG [ENA] ¢þ
>WENV170620355 FUWD013030264 [FUWD] metagenome; unknown 1996 1920 - Arg TCG [ENA] ¢þ
>WENV170624202 FUWD013177659 [FUWD] metagenome; unknown 348 272 - Arg TCG [ENA] ¢þ
>WENV170625247 FUWD013194035 [FUWD] metagenome; unknown 2626 2702 + Arg TCG [ENA] ¢þ
>WENV170628492 FUWD013247842 [FUWD] metagenome; unknown 1996 1920 - Arg TCG [ENA] ¢þ
>WENV170632485 FUWD013383366 [FUWD] metagenome; unknown 348 272 - Arg TCG [ENA] ¢þ
>WENV170633492 FUWD013396979 [FUWD] metagenome; unknown 2626 2702 + Arg TCG [ENA] ¢þ
>SRA1017972 SRR035082.223176 454 Sequencing (SRP001803) 380 304 - Arg TCG [SRA]
>SRA1018286 SRR035082.269545 454 Sequencing (SRP001803) 15 91 + Arg TCG [SRA]
>SRA1018874 SRR035082.361764 454 Sequencing (SRP001803) 241 165 - Arg TCG [SRA]
>SRA1026645 SRR035085.248989 454 Sequencing (SRP001806) 237 161 - Arg TCG [SRA]
>SRA1029242 SRR035087.96635 454 Sequencing (SRP001808) 294 370 + Arg TCG [SRA]
>SRA1029647 SRR035087.156066 454 Sequencing (SRP001808) 139 63 - Arg TCG [SRA]
>SRA1029823 SRR035087.187552 454 Sequencing (SRP001808) 310 234 - Arg TCG [SRA]
>SRA1034567 SRR035089.124575 454 Sequencing (SRP001810) 148 72 - Arg TCG [SRA]
>SRA1034574 SRR035089.126691 454 Sequencing (SRP001810) 274 350 + Arg TCG [SRA]
>SRA1035940 SRR035089.409818 454 Sequencing (SRP001810) 142 66 - Arg TCG [SRA]
>SRA1048204 SRR035094.128844 454 Sequencing (SRP001815) 243 319 + Arg TCG [SRA]
>SRA1049069 SRR035095.14204 454 Sequencing (SRP001816) 147 223 + Arg TCG [SRA]
>SRA1049559 SRR035095.95725 454 Sequencing (SRP001816) 119 195 + Arg TCG [SRA]
>SRA1050302 SRR035095.234322 454 Sequencing (SRP001816) 377 453 + Arg TCG [SRA]
Identical group No.272465 (9 seq.)
>WENV170623352 FUWD013147340 [FUWD] metagenome; unknown 840 764 - Arg TCG [ENA] ¢þ
>WENV170626664 FUWD013228152 [FUWD] metagenome; unknown 137 213 + Arg TCG [ENA] ¢þ
>WENV170626684 FUWD013228563 [FUWD] metagenome; unknown 466 390 - Arg TCG [ENA] ¢þ
>WENV170631617 FUWD013358875 [FUWD] metagenome; unknown 840 764 - Arg TCG [ENA] ¢þ
>SRA1018467 SRR035082.295875 454 Sequencing (SRP001803) 466 390 - Arg TCG [SRA]
>SRA1018647 SRR035082.327414 454 Sequencing (SRP001803) 137 213 + Arg TCG [SRA]
>SRA1026702 SRR035085.264160 454 Sequencing (SRP001806) 274 198 - Arg TCG [SRA]
>SRA1026797 SRR035085.292878 454 Sequencing (SRP001806) 274 198 - Arg TCG [SRA]
>SRA1035792 SRR035089.375895 454 Sequencing (SRP001810) 342 266 - Arg TCG [SRA]
Identical group No.272567 (3 seq.)
>WENV170611695 FUWD012376703 [FUWD] metagenome; unknown 112 188 + Arg TCG [ENA] ¢þ
>SRA1019679 SRR035082.500988 454 Sequencing (SRP001803) 398 474 + Arg TCG [SRA]
>SRA1034497 SRR035089.110167 454 Sequencing (SRP001810) 112 188 + Arg TCG [SRA]
Identical group No.300459 (17 seq.)
>WENV170600779 FUWD010142391 [FUWD] metagenome; unknown 173 97 - Arg TCG [ENA] ¢þ
>WENV170625933 FUWD013209829 [FUWD] metagenome; unknown 290 366 + Arg TCG [ENA] ¢þ
>WENV170634147 FUWD013411312 [FUWD] metagenome; unknown 290 366 + Arg TCG [ENA] ¢þ
>SRA1017823 SRR035082.202976 454 Sequencing (SRP001803) 291 367 + Arg TCG [SRA]
>SRA1019017 SRR035082.386933 454 Sequencing (SRP001803) 232 156 - Arg TCG [SRA]
>SRA1019097 SRR035082.400811 454 Sequencing (SRP001803) 37 113 + Arg TCG [SRA]
>SRA1030137 SRR035087.232565 454 Sequencing (SRP001808) 385 309 - Arg TCG [SRA]
>SRA1041851 SRR035091.304846 454 Sequencing (SRP001812) 229 153 - Arg TCG [SRA]
>SRA1047838 SRR035094.51526 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1047856 SRR035094.56510 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1048015 SRR035094.89414 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1048247 SRR035094.134307 454 Sequencing (SRP001815) 249 173 - Arg TCG [SRA]
>SRA1048418 SRR035094.169337 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1048511 SRR035094.190976 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1048593 SRR035094.205125 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1048727 SRR035094.235954 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
>SRA1048747 SRR035094.239901 454 Sequencing (SRP001815) 248 172 - Arg TCG [SRA]
Identical group No.300786 (4 seq.)
>WENV170612959 FUWD012765671 [FUWD] metagenome; unknown 172 96 - Arg TCG [ENA] ¢þ
>SRA1019275 SRR035082.427384 454 Sequencing (SRP001803) 100 176 + Arg TCG [SRA]
>SRA1032166 SRR035087.567511 454 Sequencing (SRP001808) 115 39 - Arg TCG [SRA]
>SRA1054615 SRR035099.173681 454 Sequencing (SRP001820) 182 106 - Arg TCG [SRA]
Identical group No.314631 (13 seq.)
>W1710821944 LKUC01000154 Thermodesulfobacteriota Smithella sp. SDB [LKUC] 2118 2194 + Arg TCG [ENA] ¡û
>W1711297444 MAEO01000229 Thermodesulfobacteriota Smithella sp. M82 [MAEO] 98550 98474 - Arg TCG [ENA] ¡û
>WENV180099034 MTBK01283140 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 6666 6742 + Arg TCG [ENA] ¢þ
>WENV183512893 OMKS01001723 [OMKS] sediment metagenome; hot spring sediment 5895 5819 - Arg TCG [ENA] ¢þ
>WENV183513839 OMKS01008374 [OMKS] sediment metagenome; hot spring sediment 6593 6669 + Arg TCG [ENA] ¢þ
>WENV170715258 LNQE01001041 [LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch 12059 12135 + Arg TCG [ENA] ¢þ
>WENV170726993 LSQX01400804 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 112857 112933 + Arg TCG [ENA] ¢þ
>WENV170971395 MTKX01004829 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 261 337 + Arg TCG [ENA] ¢þ
>WENV170977073 MTKZ01016654 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 8389 8465 + Arg TCG [ENA] ¢þ
>W141812374 JQDQ01000047 Thermodesulfobacteriota Smithella sp. SCADC [JQDQ] 39630 39706 + Arg TCG [ENA] ¡û
>SRA1019769 SRR035082.524935 454 Sequencing (SRP001803) 151 227 + Arg TCG [SRA]
>W1610685906 LKUC01000154 Thermodesulfobacteriota Smithella sp. SDB [LKUC] 2118 2194 + Arg TCG [ENA] ¡û
>W1611052327 MAEO01000229 Thermodesulfobacteriota Smithella sp. M82 [MAEO] 98550 98474 - Arg TCG [ENA] ¡û
Identical group No.357947 (2 seq.)
>WENV170607690 FUWD010849438 [FUWD] metagenome; unknown 75 1 - Arg TCG [ENA] ¢þ
>SRA1018110 SRR035082.242059 454 Sequencing (SRP001803) 256 330 + Arg TCG [SRA]
Identical group No.358828 (4 seq.)
>WENV170623412 FUWD013150311 [FUWD] metagenome; unknown 458 382 - Arg TCG [ENA] ¢þ
>WENV170631681 FUWD013361382 [FUWD] metagenome; unknown 458 382 - Arg TCG [ENA] ¢þ
>SRA1019079 SRR035082.398299 454 Sequencing (SRP001803) 456 380 - Arg TCG [SRA]
>SRA1041349 SRR035091.230921 454 Sequencing (SRP001812) 58 134 + Arg TCG [SRA]
Identical group No.372369 (2 seq.)
>SRA1017317 SRR035082.118783 454 Sequencing (SRP001803) 118 192 + Arg TCG [SRA]
>W1610920045 LSSF01000032 Unclassified Thermoplasmatales archaeon SG8-52-4 [LSSF] 262 187 - Arg TCG [ENA] ¡û
Identical group No.439663 (1 seq.)
>SRA1016956 SRR035082.60597 454 Sequencing (SRP001803) 81 155 + Arg TCG [SRA]
Identical group No.439719 (1 seq.)
>SRA1017658 SRR035082.176150 454 Sequencing (SRP001803) 251 177 - Arg TCG [SRA]
Identical group No.439720 (1 seq.)
>SRA1017669 SRR035082.177505 454 Sequencing (SRP001803) 140 213 + Arg TCG [SRA]
Identical group No.439731 (1 seq.)
>SRA1017765 SRR035082.192986 454 Sequencing (SRP001803) 96 20 - Arg TCG [SRA]
Identical group No.439866 (1 seq.)
>SRA1019182 SRR035082.414164 454 Sequencing (SRP001803) 97 23 - Arg TCG [SRA]
Identical group No.548705 (4 seq.)
>WENV170621374 FUWD013057287 [FUWD] metagenome; unknown 3813 3888 + Arg TCG [ENA] ¢þ
>WENV170629557 FUWD013273628 [FUWD] metagenome; unknown 3813 3888 + Arg TCG [ENA] ¢þ
>SRA1017960 SRR035082.221358 454 Sequencing (SRP001803) 135 60 - Arg TCG [SRA]
>SRA1018116 SRR035082.242875 454 Sequencing (SRP001803) 107 32 - Arg TCG [SRA]
Identical group No.548956 (5 seq.)
>WENV170626732 FUWD013229155 [FUWD] metagenome; unknown 2931 3006 + Arg TCG [ENA] ¢þ
>WENV170629997 FUWD013289331 [FUWD] metagenome; unknown 8235 8310 + Arg TCG [ENA] ¢þ
>SRA1016869 SRR035082.44910 454 Sequencing (SRP001803) 203 128 - Arg TCG [SRA]
>SRA1018016 SRR035082.227440 454 Sequencing (SRP001803) 181 256 + Arg TCG [SRA]
>SRA1038245 SRR035090.271164 454 Sequencing (SRP001811) 76 151 + Arg TCG [SRA]
Identical group No.609222 (2 seq.)
>WENV183668740 ORJL010769410 [ORJL] groundwater metagenome; groundwater 51091 51166 + Arg TCG [ENA] ¢þ
>SRA1017644 SRR035082.174183 454 Sequencing (SRP001803) 159 234 + Arg TCG [SRA]
Identical group No.639991 (1 seq.)
>SRA1017329 SRR035082.119725 454 Sequencing (SRP001803) 128 203 + Arg TCG [SRA]
Identical group No.640112 (1 seq.)
>SRA1018430 SRR035082.290311 454 Sequencing (SRP001803) 79 153 + Arg TCG [SRA]
Identical group No.640155 (1 seq.)
>SRA1018934 SRR035082.372920 454 Sequencing (SRP001803) 104 30 - Arg TCG [SRA]
Identical group No.654406 (4 seq.)
>WENV170611911 FUWD012436366 [FUWD] metagenome; unknown 135 206 + Arg TCG [ENA] ¢þ
>SRA1016959 SRR035082.60852 454 Sequencing (SRP001803) 50 121 + Arg TCG [SRA]
>SRA1026770 SRR035085.285388 454 Sequencing (SRP001806) 145 216 + Arg TCG [SRA]
>SRA1029412 SRR035087.122875 454 Sequencing (SRP001808) 391 462 + Arg TCG [SRA]
Identical group No.654469 (14 seq.)
>WENV170626803 FUWD013229616 [FUWD] metagenome; unknown 3279 3207 - Arg TCG [ENA] ¢þ
>SRA1019337 SRR035082.437284 454 Sequencing (SRP001803) 259 331 + Arg TCG [SRA]
>SRA1034701 SRR035089.155824 454 Sequencing (SRP001810) 520 448 - Arg TCG [SRA]
>SRA1040138 SRR035091.46446 454 Sequencing (SRP001812) 128 200 + Arg TCG [SRA]
>SRA1040597 SRR035091.121076 454 Sequencing (SRP001812) 53 125 + Arg TCG [SRA]
>SRA1040962 SRR035091.175134 454 Sequencing (SRP001812) 81 153 + Arg TCG [SRA]
>SRA1041103 SRR035091.196976 454 Sequencing (SRP001812) 81 153 + Arg TCG [SRA]
>SRA1041682 SRR035091.277877 454 Sequencing (SRP001812) 394 322 - Arg TCG [SRA]
>SRA1041935 SRR035091.316663 454 Sequencing (SRP001812) 81 153 + Arg TCG [SRA]
>SRA1042092 SRR035091.337114 454 Sequencing (SRP001812) 579 507 - Arg TCG [SRA]
>SRA1042561 SRR035091.409124 454 Sequencing (SRP001812) 144 72 - Arg TCG [SRA]
>SRA1047860 SRR035094.56725 454 Sequencing (SRP001815) 200 128 - Arg TCG [SRA]
>SRA1048113 SRR035094.112105 454 Sequencing (SRP001815) 355 427 + Arg TCG [SRA]
>SRA1048225 SRR035094.130390 454 Sequencing (SRP001815) 199 127 - Arg TCG [SRA]
Identical group No.654661 (4 seq.)
>WENV170607857 FUWD010861866 [FUWD] metagenome; unknown 106 35 - Arg TCG [ENA] ¢þ
>SRA1018591 SRR035082.316876 454 Sequencing (SRP001803) 93 22 - Arg TCG [SRA]
>SRA1026375 SRR035085.195348 454 Sequencing (SRP001806) 116 45 - Arg TCG [SRA]
>SRA1031765 SRR035087.484451 454 Sequencing (SRP001808) 332 261 - Arg TCG [SRA]
Identical group No.771086 (1 seq.)
>SRA1016917 SRR035082.52806 454 Sequencing (SRP001803) 332 260 - Arg TCG [SRA]
Identical group No.771180 (1 seq.)
>SRA1017888 SRR035082.210697 454 Sequencing (SRP001803) 273 344 + Arg TCG [SRA]
Identical group No.771183 (1 seq.)
>SRA1017904 SRR035082.212035 454 Sequencing (SRP001803) 42 116 + Arg TCG [SRA]
Identical group No.771300 (1 seq.)
>SRA1019148 SRR035082.410134 454 Sequencing (SRP001803) 280 208 - Arg TCG [SRA]
Identical group No.771303 (1 seq.)
>SRA1019180 SRR035082.414137 454 Sequencing (SRP001803) 44 118 + Arg TCG [SRA]
Identical group No.771316 (1 seq.)
>SRA1019332 SRR035082.436980 454 Sequencing (SRP001803) 386 459 + Arg TCG [SRA]
Identical group No.771320 (1 seq.)
>SRA1019348 SRR035082.439058 454 Sequencing (SRP001803) 229 158 - Arg TCG [SRA]
Identical group No.833597 (1 seq.)
>SRA1019091 SRR035082.400119 454 Sequencing (SRP001803) 361 287 - Arg TCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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