tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001804)

Anticodon = GCT

HIT: 21 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.9992 (3 seq.)
>WENV170611729 FUWD012385440 [FUWD] metagenome; unknown 166 259 + Ser GCT [ENA] ¢þ
>SRA1021066 SRR035083.204986 454 Sequencing (SRP001804) 167 260 + Ser GCT [SRA]
>SRA1036909 SRR035090.37467 454 Sequencing (SRP001811) 244 337 + Ser GCT [SRA]
Identical group No.13442 (14 seq.)
>SRA1020334 SRR035083.98303 454 Sequencing (SRP001804) 114 22 - Ser GCT [SRA]
>SRA1020512 SRR035083.127693 454 Sequencing (SRP001804) 112 20 - Ser GCT [SRA]
>SRA1020836 SRR035083.171342 454 Sequencing (SRP001804) 456 364 - Ser GCT [SRA]
>SRA1021244 SRR035083.227941 454 Sequencing (SRP001804) 145 53 - Ser GCT [SRA]
>SRA1021288 SRR035083.237016 454 Sequencing (SRP001804) 145 53 - Ser GCT [SRA]
>SRA1021499 SRR035083.266198 454 Sequencing (SRP001804) 112 20 - Ser GCT [SRA]
>SRA1021954 SRR035083.331676 454 Sequencing (SRP001804) 145 53 - Ser GCT [SRA]
>SRA1022119 SRR035083.355684 454 Sequencing (SRP001804) 428 336 - Ser GCT [SRA]
>SRA1022564 SRR035083.424735 454 Sequencing (SRP001804) 173 265 + Ser GCT [SRA]
>SRA1031978 SRR035087.524255 454 Sequencing (SRP001808) 262 170 - Ser GCT [SRA]
>SRA1037816 SRR035090.200872 454 Sequencing (SRP001811) 150 58 - Ser GCT [SRA]
>SRA1054168 SRR035099.74429 454 Sequencing (SRP001820) 329 237 - Ser GCT [SRA]
>SRA1054199 SRR035099.81380 454 Sequencing (SRP001820) 329 237 - Ser GCT [SRA]
>SRA1054559 SRR035099.163635 454 Sequencing (SRP001820) 380 288 - Ser GCT [SRA]
Identical group No.19580 (1 seq.)
>SRA1020609 SRR035083.140510 454 Sequencing (SRP001804) 358 450 + Ser GCT [SRA]
Identical group No.24686 (4 seq.)
>WENV170611714 FUWD012381996 [FUWD] metagenome; unknown 30 121 + Ser GCT [ENA] ¢þ
>SRA1020246 SRR035083.82413 454 Sequencing (SRP001804) 232 323 + Ser GCT [SRA]
>SRA1020812 SRR035083.167648 454 Sequencing (SRP001804) 232 323 + Ser GCT [SRA]
>SRA1042101 SRR035091.338232 454 Sequencing (SRP001812) 397 306 - Ser GCT [SRA]
Identical group No.29972 (1 seq.)
>SRA1022327 SRR035083.390250 454 Sequencing (SRP001804) 211 302 + Ser GCT [SRA]
Identical group No.30416 (3 seq.)
>WENV170607789 FUWD010855984 [FUWD] metagenome; unknown 95 5 - Ser GCT [ENA] ¢þ
>SRA1022823 SRR035083.467427 454 Sequencing (SRP001804) 242 152 - Ser GCT [SRA]
>SRA1034210 SRR035089.24729 454 Sequencing (SRP001810) 295 205 - Ser GCT [SRA]
Identical group No.30431 (9 seq.)
>WENV170621055 FUWD013047711 [FUWD] metagenome; unknown 289 379 + Ser GCT [ENA] ¢þ
>WENV170629220 FUWD013264516 [FUWD] metagenome; unknown 289 379 + Ser GCT [ENA] ¢þ
>SRA1020924 SRR035083.186154 454 Sequencing (SRP001804) 108 198 + Ser GCT [SRA]
>SRA1021035 SRR035083.200891 454 Sequencing (SRP001804) 108 198 + Ser GCT [SRA]
>SRA1021161 SRR035083.218292 454 Sequencing (SRP001804) 471 381 - Ser GCT [SRA]
>SRA1021310 SRR035083.240393 454 Sequencing (SRP001804) 288 378 + Ser GCT [SRA]
>SRA1021495 SRR035083.265751 454 Sequencing (SRP001804) 289 379 + Ser GCT [SRA]
>SRA1021863 SRR035083.320231 454 Sequencing (SRP001804) 13 103 + Ser GCT [SRA]
>SRA1035970 SRR035089.414842 454 Sequencing (SRP001810) 195 285 + Ser GCT [SRA]
Identical group No.42734 (2 seq.)
>WENV170698677 LGVF01390546 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 919 829 - Ser GCT [ENA] ¢þ
>SRA1020918 SRR035083.185290 454 Sequencing (SRP001804) 381 291 - Ser GCT [SRA]
Identical group No.45183 (1 seq.)
>SRA1022725 SRR035083.448454 454 Sequencing (SRP001804) 354 264 - Ser GCT [SRA]
Identical group No.52749 (3 seq.)
>WENV170611770 FUWD012391530 [FUWD] metagenome; unknown 6 95 + Ser GCT [ENA] ¢þ
>SRA1023005 SRR035083.503531 454 Sequencing (SRP001804) 6 95 + Ser GCT [SRA]
>SRA1054527 SRR035099.156096 454 Sequencing (SRP001820) 267 356 + Ser GCT [SRA]
Identical group No.58005 (5 seq.)
>WENV170613340 FUWD012798001 [FUWD] metagenome; unknown 493 404 - Ser GCT [ENA] ¢þ
>SRA1021797 SRR035083.311454 454 Sequencing (SRP001804) 228 317 + Ser GCT [SRA]
>SRA1021860 SRR035083.319461 454 Sequencing (SRP001804) 227 316 + Ser GCT [SRA]
>SRA1037893 SRR035090.214848 454 Sequencing (SRP001811) 93 4 - Ser GCT [SRA]
>SRA1039354 SRR035090.474897 454 Sequencing (SRP001811) 93 4 - Ser GCT [SRA]
Identical group No.71880 (2 seq.)
>SRA1021833 SRR035083.314845 454 Sequencing (SRP001804) 94 183 + Ser GCT [SRA]
>SRA1022028 SRR035083.341200 454 Sequencing (SRP001804) 91 180 + Ser GCT [SRA]
Identical group No.71882 (2 seq.)
>SRA1022603 SRR035083.431107 454 Sequencing (SRP001804) 258 169 - Ser GCT [SRA]
>SRA1022917 SRR035083.485815 454 Sequencing (SRP001804) 259 170 - Ser GCT [SRA]
Identical group No.71883 (1 seq.)
>SRA1022839 SRR035083.469937 454 Sequencing (SRP001804) 329 242 - Ser GCT [SRA]
Identical group No.71884 (1 seq.)
>SRA1022937 SRR035083.490714 454 Sequencing (SRP001804) 149 238 + Ser GCT [SRA]
Identical group No.86407 (1 seq.)
>SRA1020688 SRR035083.151589 454 Sequencing (SRP001804) 521 436 - Ser GCT [SRA]
Identical group No.98486 (2 seq.)
>WENV170607770 FUWD010855033 [FUWD] metagenome; unknown 422 336 - Ser GCT [ENA] ¢þ
>SRA1021104 SRR035083.208925 454 Sequencing (SRP001804) 407 321 - Ser GCT [SRA]
Identical group No.152392 (1 seq.)
>SRA1019891 SRR035083.15675 454 Sequencing (SRP001804) 358 274 - Ser GCT [SRA]
Identical group No.167773 (2 seq.)
>SRA1021761 SRR035083.304815 454 Sequencing (SRP001804) 21 105 + Ser GCT [SRA]
>SRA1049210 SRR035095.38734 454 Sequencing (SRP001816) 359 275 - Ser GCT [SRA]
Identical group No.216870 (1 seq.)
>SRA1020003 SRR035083.39421 454 Sequencing (SRP001804) 131 50 - Ser GCT [SRA]
Identical group No.222866 (7 seq.)
>WENV170215495 CEPX01159329 [CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 283 363 + Ser GCT [ENA] ¢þ
>WENV170612512 FUWD012626629 [FUWD] metagenome; unknown 234 314 + Ser GCT [ENA] ¢þ
>WENV170613487 FUWD012808292 [FUWD] metagenome; unknown 321 401 + Ser GCT [ENA] ¢þ
>SRA1020664 SRR035083.148698 454 Sequencing (SRP001804) 199 119 - Ser GCT [SRA]
>SRA1041211 SRR035091.214083 454 Sequencing (SRP001812) 94 174 + Ser GCT [SRA]
>SRA1041964 SRR035091.320314 454 Sequencing (SRP001812) 234 314 + Ser GCT [SRA]
>SRA1050645 SRR035095.312420 454 Sequencing (SRP001816) 189 109 - Ser GCT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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