tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001804)

Anticodon = TGA

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.1713 (3 seq.)
>WENV170611711 FUWD012381480 [FUWD] metagenome; unknown 215 311 + Ser TGA [ENA] ¢þ
>SRA1020170 SRR035083.66032 454 Sequencing (SRP001804) 214 310 + Ser TGA [SRA]
>SRA1035789 SRR035089.374935 454 Sequencing (SRP001810) 183 279 + Ser TGA [SRA]
Identical group No.29973 (1 seq.)
>SRA1022671 SRR035083.439929 454 Sequencing (SRP001804) 263 172 - Ser TGA [SRA]
Identical group No.45182 (2 seq.)
>SRA1022604 SRR035083.431107 454 Sequencing (SRP001804) 159 71 - Ser TGA [SRA]
>SRA1022918 SRR035083.485815 454 Sequencing (SRP001804) 159 71 - Ser TGA [SRA]
Identical group No.45184 (1 seq.)
>SRA1020904 SRR035083.181933 454 Sequencing (SRP001804) 143 233 + Ser TGA [SRA]
Identical group No.79253 (3 seq.)
>WENV170611728 FUWD012385440 [FUWD] metagenome; unknown 68 156 + Ser TGA [ENA] ¢þ
>SRA1021065 SRR035083.204986 454 Sequencing (SRP001804) 69 157 + Ser TGA [SRA]
>SRA1036908 SRR035090.37467 454 Sequencing (SRP001811) 146 234 + Ser TGA [SRA]
Identical group No.88170 (50 seq.)
>W131066932 ANPJ01000009 Bacteroidetes Dokdonia sp. PRO95 [ANPJ] 146102 146189 + Ser TGA [ENA] ¡û
>W131236551 AUML01000035 Bacteroidetes Aquimarina muelleri DSM 19832 [AUML] 28894 28979 + Ser TGA [ENA] ¡û
>C171092551 CP019352 Bacteroidetes Lacinutrix venerupis DOK2-8 (CP019352) 2050334 2050421 + Ser TGA - ¡û
>W141079134 ATLG01000016 Bacteroidetes Cellulophaga baltica 4 [ATLG] 18580 18495 - Ser TGA [ENA] ¡û
>W141079167 ATLH01000017 Bacteroidetes Cellulophaga baltica 13 [ATLH] 25878 25793 - Ser TGA [ENA] ¡û
>W141079202 ATLI01000015 Bacteroidetes Cellulophaga baltica 18 [ATLI] 155064 154979 - Ser TGA [ENA] ¡û
>W141079235 ATLJ01000023 Bacteroidetes Cellulophaga baltica NN016038 [ATLJ] 27965 27880 - Ser TGA [ENA] ¡û
>WENV182581236 OJGX01001230 [OJGX] seawater metagenome; Sea water 8767 8854 + Ser TGA [ENA] ¢þ
>W141274875 JACA01000026 Bacteroidetes Aquimarina macrocephali JAMB N27 [JACA] 98119 98206 + Ser TGA [ENA] ¡û
>W141274893 JACB01000014 Bacteroidetes Aquimarina megaterium XH134 [JACB] 58960 58873 - Ser TGA [ENA] ¡û
>W141276307 JADR01000001 Bacteroidetes Olleya marilimosa CAM030 [JADR] 413982 413895 - Ser TGA [ENA] ¡û
>WENV170015771 AZII01008327 [AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte 821 908 + Ser TGA [ENA] ¢þ
>WENV170298280 CESF01083472 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 210535 210622 + Ser TGA [ENA] ¢þ
>WENV170535591 CEWP01079521 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10835 10750 - Ser TGA [ENA] ¢þ
>WENV170537576 CEWR01015369 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 189 102 - Ser TGA [ENA] ¢þ
>WENV170782032 MAAC01006654 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 18650 18737 + Ser TGA [ENA] ¢þ
>WENV170782705 MAAC01011176 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 192436 192523 + Ser TGA [ENA] ¢þ
>WENV170783839 MAAC01019214 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 290959 291046 + Ser TGA [ENA] ¢þ
>WENV170942631 MDTG01381400 [MDTG] marine metagenome; seawater 210442 210529 + Ser TGA [ENA] ¢þ
>C181175211 CP029151 Bacteroidetes Dokdonia sp. Dokd-P16 (CP029151) 33618 33533 - Ser TGA - ¡û
>C191083485 CP031964 Bacteroidetes Flavobacteriaceae bacterium AU392 (CP031964) 1729724 1729639 - Ser TGA - ¡û
>W141563309 JHZX01000001 Bacteroidetes Sediminibacter sp. Hel_I_10 [JHZX] 219231 219316 + Ser TGA [ENA] ¡û
>W1910693668 MDGO01000013 Bacteroidetes Gaetbulibacter sp. 5U11 (MDGO) 723677 723762 + Ser TGA [ENA] ¡û
>W1911535365 OMKA01000003 Bacteroidetes Aquimarina sp. Aq78 (OMKA) 38214 38299 + Ser TGA [ENA] ¡û
>W1911535425 OMKB01000014 Bacteroidetes Aquimarina sp. Aq349 (OMKB) 649374 649289 - Ser TGA [ENA] ¡û
>W1911535545 OMKF01000021 Bacteroidetes Aquimarina sp. Aq78 (OMKF) 38148 38233 + Ser TGA [ENA] ¡û
>W1911538854 OMPD01000014 Bacteroidetes Aquimarina sp. AU58 (OMPD) 2145286 2145201 - Ser TGA [ENA] ¡û
>W1911538927 OMPF01000016 Bacteroidetes Aquimarina sp. AU119 (OMPF) 1403 1488 + Ser TGA [ENA] ¡û
>W1810172974 PJMS01000001 Bacteroidetes Aquimarina sp. MAR_2010_214 Mar_2010_214 (PJMS) 3014464 3014379 - Ser TGA [ENA] ¡û
>SRA1021069 SRR035083.205049 454 Sequencing (SRP001804) 24 109 + Ser TGA [SRA]
>C151061207 CP009887 Bacteroidetes Cellulophaga baltica NN016038 3402172 3402087 - Ser TGA [Ensembl] ¡û
>C151062882 CP009976 Bacteroidetes Cellulophaga baltica 18 3429331 3429246 - Ser TGA [Ensembl] ¡û
>W1510012885 BBNQ01000003 Bacteroidetes Algibacter lectus JCM 19300 [BBNQ] 38766 38679 - Ser TGA [ENA] ¡û
>W1510013019 BBNU01000010 Bacteroidetes Algibacter lectus JCM 19274 [BBNU] 139944 139857 - Ser TGA [ENA] ¡û
>C11104724 CP002453 Bacteroidetes Cellulophaga algicola DSM 14237 4140008 4139923 - Ser TGA [Ensembl] ¡û
>C11111612 CP002528 Bacteroidetes Krokinobacter sp. 4H-3-7-5 2608123 2608210 + Ser TGA [Ensembl] ¡û
>W1511320927 JQCT01000011 Bacteroidetes Cellulophaga sp. E6[2014] [JQCT] 15759 15674 - Ser TGA [ENA] ¡û
>W1511534162 JYNQ01000001 Bacteroidetes Lacinutrix sp. Hel_I_90 Hel_I _90 [JYNQ] 250360 250273 - Ser TGA [ENA] ¡û
>C161105092 HG315671 Bacteroidetes Formosa agariphila KMM 3901 type strain: KMM 3901 2981702 2981615 - Ser TGA [Ensembl] ¡û
>W121031934 AHHE02000040 Bacteroidetes Aquimarina agarilytica ZC1 [AHHE] 11727 11640 - Ser TGA [ENA] ¡û
>W121063899 AJLT01000087 Bacteroidetes Gillisia sp. CBA3202 [AJLT] 1312 1399 + Ser TGA [ENA] ¡û
>W1610506859 FLRG01000010 Bacteroidetes Aquimarina megaterium (FLRG) 131386 131299 - Ser TGA [ENA] ¡û
>WENV078344 AAGA01000308 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 3106 3195 + Ser TGA [ENA]
>W1710499077 FLRG01000010 Bacteroidetes Aquimarina megaterium (FLRG) 131386 131299 - Ser TGA [ENA] ¡û
>W1710514689 FNBD01000006 Bacteroidetes Cellulophaga baltica (FNBD) 40490 40405 - Ser TGA [ENA] ¡û
>W1710528640 FNNJ01000011 Bacteroidetes Lutibacter oricola (FNNJ) 101068 100981 - Ser TGA [ENA] ¡û
>W1710532550 FNQK01000013 Bacteroidetes Bizionia paragorgiae (FNQK) 53586 53673 + Ser TGA [ENA] ¡û
>W1710558017 FOLN01000001 Bacteroidetes Algibacter lectus (FOLN) 26436 26523 + Ser TGA [ENA] ¡û
>W1710559050 FOMI01000007 Bacteroidetes Algibacter pectinivorans (FOMI) 40770 40857 + Ser TGA [ENA] ¡û
>W1710587937 FQYY01000004 Bacteroidetes Mesonia phycicola (FQYY) 234427 234514 + Ser TGA [ENA] ¡û
Identical group No.111502 (1 seq.)
>SRA1021818 SRR035083.313310 454 Sequencing (SRP001804) 188 274 + Ser TGA [SRA]
Identical group No.153853 (77 seq.)
>C005323 CP000108 Chlorobi Chlorobium chlorochromatii CaD3 570415 570333 - Ser TGA [Ensembl] ¡û
>C018270 CP000607 Chlorobi Prosthecochloris vibrioformis DSM 265 1190073 1189991 - Ser TGA [Ensembl] ¡û
>WENV170613664 FUWD012815692 [FUWD] metagenome; unknown 1122 1205 + Ser TGA [ENA] ¢þ
>W09103366 AAJD01000012 Chlorobi Prosthecochloris vibrioformis DSM 265 [AAJD] 2592 2509 - Ser TGA [ENA] ¡û
>SRA1018543 SRR035082.307913 454 Sequencing (SRP001803) 111 28 - Ser TGA [SRA]
>SRA1020077 SRR035083.54387 454 Sequencing (SRP001804) 93 10 - Ser TGA [SRA]
>SRA1020315 SRR035083.95829 454 Sequencing (SRP001804) 42 125 + Ser TGA [SRA]
>SRA1020333 SRR035083.98303 454 Sequencing (SRP001804) 208 125 - Ser TGA [SRA]
>SRA1020420 SRR035083.112053 454 Sequencing (SRP001804) 91 8 - Ser TGA [SRA]
>SRA1020511 SRR035083.127693 454 Sequencing (SRP001804) 206 123 - Ser TGA [SRA]
>SRA1020618 SRR035083.141439 454 Sequencing (SRP001804) 42 125 + Ser TGA [SRA]
>SRA1020676 SRR035083.151027 454 Sequencing (SRP001804) 113 196 + Ser TGA [SRA]
>SRA1020731 SRR035083.156910 454 Sequencing (SRP001804) 260 343 + Ser TGA [SRA]
>SRA1021004 SRR035083.196152 454 Sequencing (SRP001804) 246 329 + Ser TGA [SRA]
>SRA1021133 SRR035083.213223 454 Sequencing (SRP001804) 170 253 + Ser TGA [SRA]
>SRA1021195 SRR035083.222248 454 Sequencing (SRP001804) 43 126 + Ser TGA [SRA]
>SRA1021243 SRR035083.227941 454 Sequencing (SRP001804) 239 156 - Ser TGA [SRA]
>SRA1021245 SRR035083.228190 454 Sequencing (SRP001804) 92 175 + Ser TGA [SRA]
>SRA1021287 SRR035083.237016 454 Sequencing (SRP001804) 239 156 - Ser TGA [SRA]
>SRA1021498 SRR035083.266198 454 Sequencing (SRP001804) 206 123 - Ser TGA [SRA]
>SRA1021580 SRR035083.275748 454 Sequencing (SRP001804) 371 454 + Ser TGA [SRA]
>SRA1021664 SRR035083.290010 454 Sequencing (SRP001804) 136 53 - Ser TGA [SRA]
>SRA1021811 SRR035083.312690 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1021853 SRR035083.317812 454 Sequencing (SRP001804) 124 41 - Ser TGA [SRA]
>SRA1021885 SRR035083.324145 454 Sequencing (SRP001804) 104 187 + Ser TGA [SRA]
>SRA1021935 SRR035083.329251 454 Sequencing (SRP001804) 135 218 + Ser TGA [SRA]
>SRA1021953 SRR035083.331676 454 Sequencing (SRP001804) 239 156 - Ser TGA [SRA]
>SRA1022037 SRR035083.342775 454 Sequencing (SRP001804) 115 32 - Ser TGA [SRA]
>SRA1022083 SRR035083.349811 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022184 SRR035083.365110 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022230 SRR035083.371262 454 Sequencing (SRP001804) 41 124 + Ser TGA [SRA]
>SRA1022247 SRR035083.374137 454 Sequencing (SRP001804) 155 72 - Ser TGA [SRA]
>SRA1022321 SRR035083.389183 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022504 SRR035083.415272 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022507 SRR035083.415663 454 Sequencing (SRP001804) 124 41 - Ser TGA [SRA]
>SRA1022531 SRR035083.421688 454 Sequencing (SRP001804) 36 119 + Ser TGA [SRA]
>SRA1022563 SRR035083.424735 454 Sequencing (SRP001804) 79 162 + Ser TGA [SRA]
>SRA1022589 SRR035083.429299 454 Sequencing (SRP001804) 128 45 - Ser TGA [SRA]
>SRA1022791 SRR035083.461356 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022867 SRR035083.476091 454 Sequencing (SRP001804) 173 256 + Ser TGA [SRA]
>SRA1022892 SRR035083.480011 454 Sequencing (SRP001804) 36 119 + Ser TGA [SRA]
>SRA1022944 SRR035083.492741 454 Sequencing (SRP001804) 72 155 + Ser TGA [SRA]
>SRA1022973 SRR035083.498861 454 Sequencing (SRP001804) 127 44 - Ser TGA [SRA]
>SRA1026023 SRR035085.128543 454 Sequencing (SRP001806) 163 80 - Ser TGA [SRA]
>SRA1028909 SRR035087.36046 454 Sequencing (SRP001808) 93 10 - Ser TGA [SRA]
>SRA1029881 SRR035087.195688 454 Sequencing (SRP001808) 94 11 - Ser TGA [SRA]
>SRA1031977 SRR035087.524255 454 Sequencing (SRP001808) 356 273 - Ser TGA [SRA]
>SRA1033692 SRR035088.326312 454 Sequencing (SRP001809) 119 202 + Ser TGA [SRA]
>SRA1033916 SRR035088.405934 454 Sequencing (SRP001809) 197 280 + Ser TGA [SRA]
>SRA1035845 SRR035089.387519 454 Sequencing (SRP001810) 395 478 + Ser TGA [SRA]
>SRA1036833 SRR035090.20100 454 Sequencing (SRP001811) 72 155 + Ser TGA [SRA]
>SRA1036871 SRR035090.29678 454 Sequencing (SRP001811) 414 497 + Ser TGA [SRA]
>SRA1037178 SRR035090.88136 454 Sequencing (SRP001811) 61 144 + Ser TGA [SRA]
>SRA1037469 SRR035090.138329 454 Sequencing (SRP001811) 75 158 + Ser TGA [SRA]
>SRA1037492 SRR035090.142333 454 Sequencing (SRP001811) 422 505 + Ser TGA [SRA]
>SRA1037640 SRR035090.166947 454 Sequencing (SRP001811) 69 152 + Ser TGA [SRA]
>SRA1037652 SRR035090.169756 454 Sequencing (SRP001811) 69 152 + Ser TGA [SRA]
>SRA1037815 SRR035090.200872 454 Sequencing (SRP001811) 244 161 - Ser TGA [SRA]
>SRA1038053 SRR035090.239510 454 Sequencing (SRP001811) 71 154 + Ser TGA [SRA]
>SRA1038060 SRR035090.240978 454 Sequencing (SRP001811) 125 42 - Ser TGA [SRA]
>SRA1038213 SRR035090.266097 454 Sequencing (SRP001811) 156 73 - Ser TGA [SRA]
>SRA1038258 SRR035090.275257 454 Sequencing (SRP001811) 147 64 - Ser TGA [SRA]
>SRA1038477 SRR035090.313059 454 Sequencing (SRP001811) 312 395 + Ser TGA [SRA]
>SRA1038596 SRR035090.333358 454 Sequencing (SRP001811) 69 152 + Ser TGA [SRA]
>SRA1038802 SRR035090.369478 454 Sequencing (SRP001811) 291 374 + Ser TGA [SRA]
>SRA1038808 SRR035090.370924 454 Sequencing (SRP001811) 170 253 + Ser TGA [SRA]
>SRA1038858 SRR035090.381487 454 Sequencing (SRP001811) 170 253 + Ser TGA [SRA]
>SRA1038898 SRR035090.390712 454 Sequencing (SRP001811) 55 138 + Ser TGA [SRA]
>SRA1039449 SRR035090.494821 454 Sequencing (SRP001811) 40 123 + Ser TGA [SRA]
>SRA1039456 SRR035090.496129 454 Sequencing (SRP001811) 61 144 + Ser TGA [SRA]
>SRA1039519 SRR035090.507904 454 Sequencing (SRP001811) 10 93 + Ser TGA [SRA]
>SRA1039786 SRR035090.568998 454 Sequencing (SRP001811) 350 433 + Ser TGA [SRA]
>SRA1045644 SRR035093.140663 454 Sequencing (SRP001814) 150 67 - Ser TGA [SRA]
>SRA1050563 SRR035095.293448 454 Sequencing (SRP001816) 193 276 + Ser TGA [SRA]
>SRA1054167 SRR035099.74429 454 Sequencing (SRP001820) 423 340 - Ser TGA [SRA]
>SRA1054198 SRR035099.81380 454 Sequencing (SRP001820) 423 340 - Ser TGA [SRA]
>SRA1054236 SRR035099.90380 454 Sequencing (SRP001820) 152 69 - Ser TGA [SRA]
Identical group No.210159 (4 seq.)
>WENV183812103 PYLN01000026 [PYLN] freshwater metagenome; meromictic lake 457 375 - Ser TGA [ENA] ¢þ
>SRA1021574 SRR035083.275025 454 Sequencing (SRP001804) 372 454 + Ser TGA [SRA]
>SRA1022561 SRR035083.424332 454 Sequencing (SRP001804) 469 551 + Ser TGA [SRA]
>SRA1039089 SRR035090.422621 454 Sequencing (SRP001811) 402 484 + Ser TGA [SRA]
Identical group No.210162 (2 seq.)
>SRA1021093 SRR035083.207235 454 Sequencing (SRP001804) 145 227 + Ser TGA [SRA]
>SRA1039504 SRR035090.505531 454 Sequencing (SRP001811) 127 209 + Ser TGA [SRA]
Identical group No.222859 (3 seq.)
>WENV170611759 FUWD012390141 [FUWD] metagenome; unknown 180 100 - Ser TGA [ENA] ¢þ
>SRA1022489 SRR035083.412852 454 Sequencing (SRP001804) 200 120 - Ser TGA [SRA]
>SRA1049629 SRR035095.107842 454 Sequencing (SRP001816) 275 193 - Ser TGA [SRA]
Identical group No.228202 (1 seq.)
>SRA1022347 SRR035083.392685 454 Sequencing (SRP001804) 92 11 - Ser TGA [SRA]
Identical group No.232362 (1 seq.)
>SRA1022837 SRR035083.469193 454 Sequencing (SRP001804) 76 157 + Ser TGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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