tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001805)

Anticodon = CGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.458396 (77 seq.)
>W1710874089 LMNH01000006 Actinomycetota Nocardioides sp. Leaf285 [LMNH] 24559 24634 + Ala CGC [ENA]
>W1710874874 LMNY01000002 Actinomycetota Nocardioides sp. Leaf307 [LMNY] 1190464 1190389 - Ala CGC [ENA]
>W1710879970 LMSA01000001 Actinomycetota Knoellia sp. Soil729 [LMSA] 886776 886701 - Ala CGC [ENA]
>W1710880976 LMSS01000003 Actinomycetota Phycicoccus sp. Soil802 [LMSS] 530645 530718 + Ala CGC [ENA]
>W1710881008 LMST01000001 Actinomycetota Phycicoccus sp. Soil803 [LMST] 827421 827496 + Ala CGC [ENA]
>W1710881220 LMSX01000009 Actinomycetota Terrabacter sp. Soil811 [LMSX] 47166 47239 + Ala CGC [ENA]
>W1711137999 LVCF01000004 Actinomycetota Branchiibius sp. NY16-3462-2 [LVCF] 63197 63272 + Ala CGC [ENA]
>W1711491988 MKKA01000011 Actinomycetota Ornithinimicrobium sp. CNJ-824 [MKKA] 297598 297523 - Ala CGC [ENA]
>W131155919 AQOZ01000019 Actinomycetota Nocardioides sp. Iso805N [AQOZ] 130903 130978 + Ala CGC [ENA]
>W131217048 ATWJ01000012 Actinomycetota Ornithinimicrobium pekingense DSM 21552 [ATWJ] 300669 300594 - Ala CGC [ENA]
>W131227579 AUFG01000022 Actinomycetota Arsenicicoccus bolidensis DSM 15745 [AUFG] 22741 22666 - Ala CGC [ENA]
>w012505 AAMN01000004 Actinomycetota Janibacter sp. HTCC2649 [AAMN] 13087 13164 + Ala CGC [ENA]
>WENV180098586 MTBK01255882 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 206 281 + Ala CGC [ENA]
>WENV180209244 OBAK01047786 [OBAK] marine metagenome; ENVO.00002150 108 183 + Ala CGC [ENA]
>WENV180363926 OBNZ01026382 [OBNZ] marine metagenome; ENVO:00002010 565 492 - Ala CGC [ENA]
>WENV181163259 OEIO01171284 [OEIO] marine metagenome; sea ice 268 341 + Ala CGC [ENA]
>WENV181189837 OEOF01255228 [OEOF] activated sludge metagenome; Activated Sludge 192 118 - Ala CGC [ENA]
>WENV181309633 OFIW01017677 [OFIW] marine metagenome; seawater 286 359 + Ala CGC [ENA]
>WENV181314031 OFJI01010338 [OFJI] marine metagenome; sea ice 471 398 - Ala CGC [ENA]
>WENV181371666 OFQV01038799 [OFQV] wastewater metagenome; WWTP Cannobio (Effluent) 211 136 - Ala CGC [ENA]
>WENV181391568 OFRT01023363 [OFRT] seawater metagenome; seawater 419 346 - Ala CGC [ENA]
>WENV181392925 OFRX01017585 [OFRX] seawater metagenome; seawater 764 837 + Ala CGC [ENA]
>W141242917 CAIZ01000134 Actinomycetota Phycicoccus elongatus Lp2 [CAIZ] 11501 11426 - Ala CGC [ENA]
>W141243081 CAJC01000209 Actinomycetota Tetrasphaera jenkinsii Ben 74 [CAJC] 1657 1730 + Ala CGC [ENA]
>WENV183619068 OOFP01023215 [OOFP] marine metagenome; seawater 419 346 - Ala CGC [ENA]
>WENV183629294 OOGP01017720 [OOGP] marine metagenome; seawater 764 837 + Ala CGC [ENA]
>WENV183629990 OOGR01002528 [OOGR] marine metagenome; seawater 800 873 + Ala CGC [ENA]
>WENV183631178 OOGU01045315 [OOGU] marine metagenome; sea ice 254 181 - Ala CGC [ENA]
>WENV183678099 ORJL011837076 [ORJL] groundwater metagenome; groundwater 135 61 - Ala CGC [ENA]
>WENV170011466 APMI01067364 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 492 567 + Ala CGC [ENA]
>WENV170011744 APMI01087326 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 2396 2321 - Ala CGC [ENA]
>WENV170552070 CXWJ01036985 [CXWJ] wastewater metagenome; activated sludge 980 1055 + Ala CGC [ENA]
>WENV170553898 CXWK01036890 [CXWK] wastewater metagenome; activated sludge 2721 2646 - Ala CGC [ENA]
>WENV170568582 FLMP01052746 [FLMP] seawater metagenome; seawater 519 446 - Ala CGC [ENA]
>WENV170570997 FLOH01000049 [FLOH] marine metagenome; water 56323 56248 - Ala CGC [ENA]
>WENV170572212 FLOH01000624 [FLOH] marine metagenome; water 23490 23563 + Ala CGC [ENA]
>WENV170604036 FUWD010355565 [FUWD] metagenome; unknown 503 576 + Ala CGC [ENA]
>WENV170620698 FUWD013037114 [FUWD] metagenome; unknown 4636 4561 - Ala CGC [ENA]
>WENV170626818 FUWD013229707 [FUWD] metagenome; unknown 2328 2255 - Ala CGC [ENA]
>WENV170626823 FUWD013229727 [FUWD] metagenome; unknown 14777 14704 - Ala CGC [ENA]
>WENV170950521 MEHZ011501554 [MEHZ] marine metagenome; marine surface water 150 223 + Ala CGC [ENA]
>C181197163 CP031229 Actinomycetota Ornithinimicrobium avium AMA3305 [CP031229] 3295262 3295337 + Ala CGC -
>C191150896 CP036403 Actinomycetota Ornithinimicrobium sp. HY006 [CP036403] 579548 579623 + Ala CGC -
>C191158365 CP038213 Actinomycetota Ornithinimicrobium flavum CPCC 203535 [CP038213] 654425 654498 + Ala CGC -
>C191186692 CP041091 Actinomycetota Nocardioides sambongensis KUDC 5002 [CP041091] 4133674 4133749 + Ala CGC -
>W1911495838 OBQK01000002 Actinomycetota Ornithinimicrobium cerasi USBA17B2 [OBQK] 353017 352942 - Ala CGC [ENA]
>W1911533118 OKQN01000007 Actinomycetota Janibacter massiliensis Marseille-P4121 [OKQN] 282832 282906 + Ala CGC [ENA]
>W1911817412 QZMN01000003 Actinomycetota Ornithinimicrobium cerasi CPCC 203383 [QZMN] 146021 146096 + Ala CGC [ENA]
>W1810364573 PVTI01000027 Actinomycetota Knoellia remsis ATCC BAA-1496 [PVTI] 46856 46930 + Ala CGC [ENA]
>W1810594934 QGDN01000001 Actinomycetota Branchiibius hedensis DSM 22951 [QGDN] 2599697 2599622 - Ala CGC [ENA]
>SRA1023718 SRR035084.160050 454 Sequencing (SRP001805) 110 37 - Ala CGC [SRA]
>SRA1024268 SRR035084.288110 454 Sequencing (SRP001805) 84 159 + Ala CGC [SRA]
>SRA1024280 SRR035084.291525 454 Sequencing (SRP001805) 306 233 - Ala CGC [SRA]
>C151090483 CP012070 Actinomycetota Arsenicicoccus sp. oral taxon 190 F0371 [CP012070] 154309 154234 - Ala CGC -
>SRA1046915 SRR035093.418173 454 Sequencing (SRP001814) 232 305 + Ala CGC [SRA]
>SRA1047376 SRR035093.526786 454 Sequencing (SRP001814) 232 305 + Ala CGC [SRA]
>W11125308 ADVI01000094 Actinomycetota Nocardioidaceae bacterium Broad-1 [ADVI] 175894 175819 - Ala CGC [ENA]
>W1511540030 JZDQ01000004 Actinomycetota Nocardioides luteus BAFB [JZDQ] 77960 78035 + Ala CGC [ENA]
>W11155969 AFAQ01001944 Actinomycetota Rhodococcus sp. R04 [AFAQ] 378 453 + Ala CGC [ENA]
>W1610027085 AVPI01000034 Actinomycetota Knoellia flava TL1 [AVPI] 73193 73118 - Ala CGC [ENA]
>W1610027137 AVPJ01000021 Actinomycetota Knoellia sinensis KCTC 19936 [AVPJ] 21658 21585 - Ala CGC [ENA]
>W1610027179 AVPK01000010 Actinomycetota Knoellia subterranea KCTC 19937 [AVPK] 82548 82473 - Ala CGC [ENA]
>W1610736435 LMNH01000006 Actinomycetota Nocardioides sp. Leaf285 [LMNH] 24559 24634 + Ala CGC [ENA]
>W1610737220 LMNY01000002 Actinomycetota Nocardioides sp. Leaf307 [LMNY] 1190464 1190389 - Ala CGC [ENA]
>W1610742316 LMSA01000001 Actinomycetota Knoellia sp. Soil729 [LMSA] 886776 886701 - Ala CGC [ENA]
>W1610743322 LMSS01000003 Actinomycetota Phycicoccus sp. Soil802 [LMSS] 530645 530718 + Ala CGC [ENA]
>W1610743354 LMST01000001 Actinomycetota Phycicoccus sp. Soil803 [LMST] 827421 827496 + Ala CGC [ENA]
>W1610743566 LMSX01000009 Actinomycetota Terrabacter sp. Soil811 [LMSX] 47166 47239 + Ala CGC [ENA]
>W1610949085 LVCF01000004 Actinomycetota Branchiibius sp. NY16-3462-2 [LVCF] 63197 63272 + Ala CGC [ENA]
>W1710023250 AVPI01000034 Actinomycetota Knoellia flava TL1 [AVPI] 73193 73118 - Ala CGC [ENA]
>W1710023302 AVPJ01000021 Actinomycetota Knoellia sinensis KCTC 19936 [AVPJ] 21658 21585 - Ala CGC [ENA]
>W1710023344 AVPK01000010 Actinomycetota Knoellia subterranea KCTC 19937 [AVPK] 82548 82473 - Ala CGC [ENA]
>W1710506066 FMUH01000001 Actinomycetota Klenkia marina DSM 45722 [FMUH] 383808 383733 - Ala CGC [ENA]
>W1710515948 FNCF01000001 Actinomycetota Klenkia brasiliensis [FNCF] 223466 223391 - Ala CGC [ENA]
>W1710520327 FNFN01000002 Actinomycetota Nocardioides sp. YR527 [FNFN] 36014 35939 - Ala CGC [ENA]
>W1710524364 FNIR01000005 Actinomycetota Klenkia soli [FNIR] 171030 170955 - Ala CGC [ENA]
>W1710558766 FOMD01000002 Actinomycetota Klenkia taihuensis [FOMD] 225075 225000 - Ala CGC [ENA]
Identical group No.484656 (9 seq.)
>WENV180361961 OBNW01014311 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 226 153 - Ala CGC [ENA]
>WENV180391761 OBPN01039235 [OBPN] marine metagenome; seawater 224 151 - Ala CGC [ENA]
>WENV170626727 FUWD013229117 [FUWD] metagenome; unknown 13457 13382 - Ala CGC [ENA]
>WENV170629410 FUWD013269716 [FUWD] metagenome; unknown 16497 16422 - Ala CGC [ENA]
>SRA1024028 SRR035084.233560 454 Sequencing (SRP001805) 480 405 - Ala CGC [SRA]
>SRA1024055 SRR035084.238269 454 Sequencing (SRP001805) 202 277 + Ala CGC [SRA]
>SRA1046034 SRR035093.220917 454 Sequencing (SRP001814) 289 364 + Ala CGC [SRA]
>SRA1046926 SRR035093.419879 454 Sequencing (SRP001814) 133 58 - Ala CGC [SRA]
>SRA1053298 SRR035098.377159 454 Sequencing (SRP001819) 232 157 - Ala CGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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