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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001806)
Anticodon = CCT
HIT:
14 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.152074 (4 seq.)
>WENV170623608
FUWD013160274
[FUWD] metagenome; unknown
901
979
+
Arg
CCT
[ENA]
¢þ
>WENV170631885
FUWD013369768
[FUWD] metagenome; unknown
901
979
+
Arg
CCT
[ENA]
¢þ
>SRA1025668
SRR035085.63598
454 Sequencing (SRP001806)
117
39
-
Arg
CCT
[SRA]
>SRA1029536
SRR035087.142967
454 Sequencing (SRP001808)
154
232
+
Arg
CCT
[SRA]
Identical group No.177342 (4 seq.)
>WENV180372828
OBOI01135202
[OBOI] sediment metagenome; sediment
131
55
-
Arg
CCT
[ENA]
¢þ
>WENV170726330
LSQX01376036
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
1228
1304
+
Arg
CCT
[ENA]
¢þ
>WENV170776525
LXOW01178516
[LXOW] bovine gut metagenome; Cow rumen
129
203
+
Arg
CCT
[ENA]
¢þ
>SRA1025797
SRR035085.85410
454 Sequencing (SRP001806)
111
184
+
Arg
CCT
[SRA]
Identical group No.177362 (13 seq.)
>WENV170621004
FUWD013045651
[FUWD] metagenome; unknown
1382
1457
+
Arg
CCT
[ENA]
¢þ
>WENV170629161
FUWD013262546
[FUWD] metagenome; unknown
1382
1457
+
Arg
CCT
[ENA]
¢þ
>SRA1018396
SRR035082.284196
454 Sequencing (SRP001803)
183
110
-
Arg
CCT
[SRA]
>SRA1025922
SRR035085.110871
454 Sequencing (SRP001806)
415
340
-
Arg
CCT
[SRA]
>SRA1036325
SRR035089.495611
454 Sequencing (SRP001810)
318
243
-
Arg
CCT
[SRA]
>SRA1037803
SRR035090.198800
454 Sequencing (SRP001811)
96
21
-
Arg
CCT
[SRA]
>SRA1037852
SRR035090.204677
454 Sequencing (SRP001811)
96
21
-
Arg
CCT
[SRA]
>SRA1038048
SRR035090.238931
454 Sequencing (SRP001811)
95
20
-
Arg
CCT
[SRA]
>SRA1038374
SRR035090.293031
454 Sequencing (SRP001811)
96
21
-
Arg
CCT
[SRA]
>SRA1038878
SRR035090.385856
454 Sequencing (SRP001811)
96
21
-
Arg
CCT
[SRA]
>SRA1048206
SRR035094.128889
454 Sequencing (SRP001815)
415
342
-
Arg
CCT
[SRA]
>SRA1048906
SRR035094.281393
454 Sequencing (SRP001815)
185
260
+
Arg
CCT
[SRA]
>SRA1049897
SRR035095.156134
454 Sequencing (SRP001816)
475
402
-
Arg
CCT
[SRA]
Identical group No.177378 (3 seq.)
>WENV170607847
FUWD010860866
[FUWD] metagenome; unknown
137
62
-
Arg
CCT
[ENA]
¢þ
>SRA1026050
SRR035085.132311
454 Sequencing (SRP001806)
120
45
-
Arg
CCT
[SRA]
>SRA1026264
SRR035085.175021
454 Sequencing (SRP001806)
120
45
-
Arg
CCT
[SRA]
Identical group No.177417 (10 seq.)
>WENV183514660
OMKS01026750
[OMKS] sediment metagenome; hot spring sediment
239
163
-
Arg
CCT
[ENA]
¢þ
>WENV170616123
FUWD012878456
[FUWD] metagenome; unknown
100
24
-
Arg
CCT
[ENA]
¢þ
>WENV170617305
FUWD012921235
[FUWD] metagenome; unknown
322
398
+
Arg
CCT
[ENA]
¢þ
>WENV170624234
FUWD013178211
[FUWD] metagenome; unknown
708
632
-
Arg
CCT
[ENA]
¢þ
>WENV170632516
FUWD013383794
[FUWD] metagenome; unknown
708
632
-
Arg
CCT
[ENA]
¢þ
>SRA1018995
SRR035082.383558
454 Sequencing (SRP001803)
100
24
-
Arg
CCT
[SRA]
>SRA1019597
SRR035082.484761
454 Sequencing (SRP001803)
462
386
-
Arg
CCT
[SRA]
>SRA1026312
SRR035085.184232
454 Sequencing (SRP001806)
332
408
+
Arg
CCT
[SRA]
>SRA1030371
SRR035087.269140
454 Sequencing (SRP001808)
315
388
+
Arg
CCT
[SRA]
>SRA1035576
SRR035089.334157
454 Sequencing (SRP001810)
185
109
-
Arg
CCT
[SRA]
Identical group No.177454 (45 seq.)
>W1710865794
LMGY01000016
Gammaproteobacteria
Pseudoxanthomonas sp. Root630 [LMGY]
376965
377041
+
Arg
CCT
[ENA]
¡û
>W1711386654
MEFP01000019
Gammaproteobacteria
Xanthomonadaceae bacterium SCN 69-320 [MEFP]
597143
597067
-
Arg
CCT
[ENA]
¡û
>W1711387507
MEGS01000007
Gammaproteobacteria
Xanthomonadaceae bacterium SCN 69-25 [MEGS]
48087
48163
+
Arg
CCT
[ENA]
¡û
>W1711424123
MIDT01000163
Gammaproteobacteria
Xanthomonadales bacterium GWF1_69_6 [MIDT]
9773
9697
-
Arg
CCT
[ENA]
¡û
>W131175924
ARJQ01000005
Gammaproteobacteria
Rudaea cellulosilytica DSM 22992 [ARJQ]
809659
809735
+
Arg
CCT
[ENA]
¡û
>W131226648
AUEN01000001
Gammaproteobacteria
Lysobacter sp. URHA0019 [AUEN]
345223
345147
-
Arg
CCT
[ENA]
¡û
>W131227514
AUFF01000001
Gammaproteobacteria
Arenimonas composti DSM 18010 [AUFF]
364140
364064
-
Arg
CCT
[ENA]
¡û
>W1711506696
MKWQ01000005
Gammaproteobacteria
Xanthomonadales bacterium 69-70 [MKWQ]
652434
652358
-
Arg
CCT
[ENA]
¡û
>W141094222
AVCH01000154
Gammaproteobacteria
Arenimonas malthae CC-JY-1 [AVCH]
19107
19183
+
Arg
CCT
[ENA]
¡û
>W141094349
AVCK01000030
Gammaproteobacteria
Arenimonas metalli CF5-1 [AVCK]
14603
14527
-
Arg
CCT
[ENA]
¡û
>WENV181166830
OEIU01002853
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
2757
2833
+
Arg
CCT
[ENA]
¢þ
>WENV181221674
OFCW01000745
[OFCW] microbial mat metagenome; Microbial Mat
1444
1520
+
Arg
CCT
[ENA]
¢þ
>W141148251
AWXU01000025
Gammaproteobacteria
Arenimonas composti TR7-09 = DSM 18010 [AWXU]
18257
18181
-
Arg
CCT
[ENA]
¡û
>W141207708
AZNZ01000007
Gammaproteobacteria
Pseudoxanthomonas sp. J31 [AZNZ]
54241
54165
-
Arg
CCT
[ENA]
¡û
>W141215615
AZUH01000016
Gammaproteobacteria
Pseudoxanthomonas suwonensis J42 [AZUH]
28033
28109
+
Arg
CCT
[ENA]
¡û
>W141216682
AZVB01000010
Gammaproteobacteria
Pseudoxanthomonas sp. J35 [AZVB]
67789
67713
-
Arg
CCT
[ENA]
¡û
>WENV183731934
PJTU01000013
[PJTU] soil metagenome; Soil enriched on wood chips: beechwood xylan treatment
56567
56491
-
Arg
CCT
[ENA]
¢þ
>WENV183732067
PJTV01000005
[PJTV] soil metagenome; Soil enriched on wood chips: alkali lignin treatment
56567
56491
-
Arg
CCT
[ENA]
¢þ
>WENV183732434
PJTX01000244
[PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment
15741
15665
-
Arg
CCT
[ENA]
¢þ
>WENV183733400
PJTY01001618
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
2997
2921
-
Arg
CCT
[ENA]
¢þ
>WENV183734057
PJTZ01000032
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
56567
56491
-
Arg
CCT
[ENA]
¢þ
>WENV183734821
PJUA01000031
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
55423
55347
-
Arg
CCT
[ENA]
¢þ
>WENV183735535
PJUB01000034
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
55423
55347
-
Arg
CCT
[ENA]
¢þ
>WENV183736108
PJUC01000029
[PJUC] soil metagenome; Soil enriched on filter paper
55423
55347
-
Arg
CCT
[ENA]
¢þ
>WENV183741570
PJUG01000072
[PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment
55586
55510
-
Arg
CCT
[ENA]
¢þ
>WENV183741986
PJUH01000026
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
55586
55510
-
Arg
CCT
[ENA]
¢þ
>WENV183742820
PJUI01000365
[PJUI] feces metagenome; Chicken feces (2) enriched on wood chips
5634
5558
-
Arg
CCT
[ENA]
¢þ
>WENV183743095
PJUJ01000030
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
55586
55510
-
Arg
CCT
[ENA]
¢þ
>WENV183743909
PJUK01000034
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
55586
55510
-
Arg
CCT
[ENA]
¢þ
>WENV183744646
PJUL01000042
[PJUL] feces metagenome; Chicken feces enriched on filter paper
55586
55510
-
Arg
CCT
[ENA]
¢þ
>WENV170577994
FSSH01005012
[FSSH] freshwater metagenome; drinking water
107
183
+
Arg
CCT
[ENA]
¢þ
>WENV170680643
LFEF01006777
[LFEF] freshwater metagenome; waterbloom
900
976
+
Arg
CCT
[ENA]
¢þ
>WENV170711974
LNFM01008764
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
10399
10475
+
Arg
CCT
[ENA]
¢þ
>WENV170712323
LNFM01012151
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
334
258
-
Arg
CCT
[ENA]
¢þ
>C181200053
CP031413
Gammaproteobacteria
Lysobacter sp. TY2-98 [CP031413]
1736680
1736756
+
Arg
CCT
-
¡û
>W1810195894
PKSO01000002
Gammaproteobacteria
Pseudoxanthomonas sp. KAs_5_3 [PKSO]
748782
748706
-
Arg
CCT
[ENA]
¡û
>SRA1026542
SRR035085.224933
454 Sequencing (SRP001806)
458
382
-
Arg
CCT
[SRA]
>W1510018845
BBUM02000163
Gammaproteobacteria
Mizugakiibacter sediminis skMP5 [BBUM]
6146
6222
+
Arg
CCT
[ENA]
¡û
>C11118138
CP002446
Gammaproteobacteria
Pseudoxanthomonas suwonensis 11-1 [CP002446]
1366882
1366958
+
Arg
CCT
[Ensembl]
¡û
>W121110739
ALIP01000111
Gammaproteobacteria
Pseudoxanthomonas sp. GW2 [ALIP]
9564
9488
-
Arg
CCT
[ENA]
¡û
>W1610728140
LMGY01000016
Gammaproteobacteria
Pseudoxanthomonas sp. Root630 [LMGY]
376965
377041
+
Arg
CCT
[ENA]
¡û
>WENV080065
AATO01002954
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
1429
1507
+
Arg
CCT
[ENA]
>W1710570552
FOVF01000023
Gammaproteobacteria
Dokdonella immobilis [FOVF]
15456
15380
-
Arg
CCT
[ENA]
¡û
>W1710579386
FPCI01000001
Gammaproteobacteria
Pseudoxanthomonas sp. YR558 [FPCI]
721950
722026
+
Arg
CCT
[ENA]
¡û
>W1710582989
FQUK01000026
Gammaproteobacteria
Thermomonas hydrothermalis [FQUK]
9333
9257
-
Arg
CCT
[ENA]
¡û
Identical group No.282112 (5 seq.)
>WENV170618167
FUWD012955648
[FUWD] metagenome; unknown
78
151
+
Arg
CCT
[ENA]
¢þ
>SRA1026488
SRR035085.215408
454 Sequencing (SRP001806)
83
156
+
Arg
CCT
[SRA]
>SRA1026689
SRR035085.261609
454 Sequencing (SRP001806)
247
322
+
Arg
CCT
[SRA]
>SRA1030067
SRR035087.223626
454 Sequencing (SRP001808)
301
228
-
Arg
CCT
[SRA]
>SRA1030899
SRR035087.344030
454 Sequencing (SRP001808)
248
175
-
Arg
CCT
[SRA]
Identical group No.282135 (7 seq.)
>W131225894
AUDY01000012
Bacillota
Halobacillus kuroshimensis DSM 18393 [AUDY]
19894
19966
+
Arg
CCT
[ENA]
¡û
>WENV180690261
OCZS010001489
[OCZS] soil metagenome; soil
1734
1660
-
Arg
CCT
[ENA]
¢þ
>W1810533122
QCZF01000001
Actinomycetota
Blastococcus litoris GP-S2-8 [QCZF]
507716
507789
+
Arg
CCT
[ENA]
¡û
>SRA1026642
SRR035085.247460
454 Sequencing (SRP001806)
92
167
+
Arg
CCT
[SRA]
>C121018400
HE717023
Bacillota
Halobacillus halophilus DSM 2266 type strain: DSM 2266 [HE717023]
20914
20988
+
Arg
CCT
[Ensembl]
¡û
>W1710524301
FNIQ01000001
Actinomycetota
Geodermatophilus sp. DSM 45219 [FNIQ]
394987
395060
+
Arg
CCT
[ENA]
¡û
>W1710560123
FOND01000002
Actinomycetota
Blastococcus sp. DSM 46838 [FOND]
304595
304670
+
Arg
CCT
[ENA]
¡û
Identical group No.399609 (6 seq.)
>WENV180722017
ODGL01052939
[ODGL] human metagenome; G_DNA_Subgingival plaque
20
92
+
Arg
CCT
[ENA]
¢þ
>WENV181135534
OEGG01031088
[OEGG] human metagenome; G_DNA_Tongue dorsum
242
314
+
Arg
CCT
[ENA]
¢þ
>WENV183706227
PDWI01003513
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
3118
3190
+
Arg
CCT
[ENA]
¢þ
>WENV183721279
PDWJ01062272
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
977
1049
+
Arg
CCT
[ENA]
¢þ
>WENV170689436
LFRM01294757
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
339
265
-
Arg
CCT
[ENA]
¢þ
>SRA1025536
SRR035085.35191
454 Sequencing (SRP001806)
233
307
+
Arg
CCT
[SRA]
Identical group No.399657 (6 seq.)
>WENV183514758
OMKS01030360
[OMKS] sediment metagenome; hot spring sediment
495
423
-
Arg
CCT
[ENA]
¢þ
>WENV170620519
FUWD013033102
[FUWD] metagenome; unknown
652
578
-
Arg
CCT
[ENA]
¢þ
>WENV170628662
FUWD013250548
[FUWD] metagenome; unknown
4356
4430
+
Arg
CCT
[ENA]
¢þ
>SRA1025887
SRR035085.103094
454 Sequencing (SRP001806)
288
362
+
Arg
CCT
[SRA]
>SRA1033526
SRR035088.278921
454 Sequencing (SRP001809)
267
341
+
Arg
CCT
[SRA]
>SRA1043352
SRR035092.99448
454 Sequencing (SRP001813)
408
334
-
Arg
CCT
[SRA]
Identical group No.399681 (4 seq.)
>WENV170620123
FUWD013026221
[FUWD] metagenome; unknown
2414
2488
+
Arg
CCT
[ENA]
¢þ
>WENV170628256
FUWD013244073
[FUWD] metagenome; unknown
10922
10848
-
Arg
CCT
[ENA]
¢þ
>SRA1019527
SRR035082.471496
454 Sequencing (SRP001803)
264
338
+
Arg
CCT
[SRA]
>SRA1026077
SRR035085.138988
454 Sequencing (SRP001806)
311
237
-
Arg
CCT
[SRA]
Identical group No.399715 (74 seq.)
>W1710875476
LMOK01000002
Actinomycetota
Leifsonia sp. Leaf325 [LMOK]
665712
665786
+
Arg
CCT
[ENA]
¡û
>W1710876198
LMPA01000002
Actinomycetota
Plantibacter sp. Leaf171 [LMPA]
1067258
1067184
-
Arg
CCT
[ENA]
¡û
>W1710876225
LMPB01000001
Actinomycetota
Frigoribacterium sp. Leaf172 [LMPB]
819254
819328
+
Arg
CCT
[ENA]
¡û
>W1710893839
LNFD01000291
Actinomycetota
Actinomycetales bacterium Ga0077552 [LNFD]
12582
12508
-
Arg
CCT
[ENA]
¡û
>W1711079620
LSOE01000018
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
17719
17793
+
Arg
CCT
[ENA]
¡û
>W1711173315
LWCT01000046
Actinomycetota
Plantibacter sp. H53 [LWCT]
196996
196924
-
Arg
CCT
[ENA]
¡û
>WENV180367480
OBOE01105734
[OBOE] marine metagenome; ENVO:00002010
286
212
-
Arg
CCT
[ENA]
¢þ
>WENV182540400
OJAJ01000190
[OJAJ] seawater metagenome; Sea water
3964
3892
-
Arg
CCT
[ENA]
¢þ
>WENV182540806
OJAQ01000002
[OJAQ] seawater metagenome; Sea water
22557
22629
+
Arg
CCT
[ENA]
¢þ
>WENV182544229
OJBF01000004
[OJBF] seawater metagenome; Sea water
12968
12896
-
Arg
CCT
[ENA]
¢þ
>WENV182544945
OJBL01000442
[OJBL] seawater metagenome; Sea water
1729
1657
-
Arg
CCT
[ENA]
¢þ
>WENV182548493
OJBW01000721
[OJBW] seawater metagenome; Sea water
806
878
+
Arg
CCT
[ENA]
¢þ
>WENV182550017
OJBZ01001719
[OJBZ] seawater metagenome; Sea water
2197
2269
+
Arg
CCT
[ENA]
¢þ
>WENV182553160
OJCR01000201
[OJCR] seawater metagenome; Sea water
8776
8848
+
Arg
CCT
[ENA]
¢þ
>WENV182554088
OJCT01000932
[OJCT] seawater metagenome; Sea water
195
267
+
Arg
CCT
[ENA]
¢þ
>WENV182557037
OJDI01000466
[OJDI] seawater metagenome; Sea water
1208
1280
+
Arg
CCT
[ENA]
¢þ
>WENV182558522
OJDM01010786
[OJDM] seawater metagenome; Sea water
379
307
-
Arg
CCT
[ENA]
¢þ
>WENV182561574
OJDX01000006
[OJDX] seawater metagenome; Sea water
16144
16072
-
Arg
CCT
[ENA]
¢þ
>WENV182561911
OJDY01000006
[OJDY] seawater metagenome; Sea water
40941
41013
+
Arg
CCT
[ENA]
¢þ
>WENV182562631
OJDZ01028095
[OJDZ] seawater metagenome; Sea water
341
269
-
Arg
CCT
[ENA]
¢þ
>WENV182562641
OJEA01000003
[OJEA] seawater metagenome; Sea water
68297
68369
+
Arg
CCT
[ENA]
¢þ
>WENV182563036
OJEB01000006
[OJEB] seawater metagenome; Sea water
24478
24406
-
Arg
CCT
[ENA]
¢þ
>WENV182564014
OJEE01000001
[OJEE] seawater metagenome; Sea water
26420
26348
-
Arg
CCT
[ENA]
¢þ
>WENV182569012
OJEY01000018
[OJEY] seawater metagenome; Sea water
21919
21847
-
Arg
CCT
[ENA]
¢þ
>WENV182569704
OJFB01000050
[OJFB] seawater metagenome; Sea water
24151
24223
+
Arg
CCT
[ENA]
¢þ
>WENV182571083
OJFG01000296
[OJFG] seawater metagenome; Sea water
6281
6209
-
Arg
CCT
[ENA]
¢þ
>WENV182573729
OJFP01018116
[OJFP] seawater metagenome; Sea water
508
580
+
Arg
CCT
[ENA]
¢þ
>WENV182574523
OJFS01000004
[OJFS] seawater metagenome; Sea water
26195
26123
-
Arg
CCT
[ENA]
¢þ
>WENV182575819
OJFW01004117
[OJFW] seawater metagenome; Sea water
784
856
+
Arg
CCT
[ENA]
¢þ
>WENV182576566
OJFY01000125
[OJFY] seawater metagenome; Sea water
2212
2140
-
Arg
CCT
[ENA]
¢þ
>WENV182576918
OJGA01001368
[OJGA] seawater metagenome; Sea water
285
213
-
Arg
CCT
[ENA]
¢þ
>WENV182577937
OJGM01000058
[OJGM] seawater metagenome; Sea water
4372
4300
-
Arg
CCT
[ENA]
¢þ
>WENV182580760
OJGW01011578
[OJGW] seawater metagenome; Sea water
875
947
+
Arg
CCT
[ENA]
¢þ
>WENV182582088
OJHA01000006
[OJHA] seawater metagenome; Sea water
42182
42254
+
Arg
CCT
[ENA]
¢þ
>WENV182582400
OJHB01000031
[OJHB] seawater metagenome; Sea water
21009
20937
-
Arg
CCT
[ENA]
¢þ
>WENV182583203
OJHD01001195
[OJHD] seawater metagenome; Sea water
2270
2342
+
Arg
CCT
[ENA]
¢þ
>WENV182584726
OJHG01006581
[OJHG] seawater metagenome; Sea water
1587
1515
-
Arg
CCT
[ENA]
¢þ
>WENV182586807
OJHK01005631
[OJHK] seawater metagenome; Sea water
692
620
-
Arg
CCT
[ENA]
¢þ
>WENV182587538
OJHN01000009
[OJHN] seawater metagenome; Sea water
23510
23582
+
Arg
CCT
[ENA]
¢þ
>WENV182588428
OJHT01001637
[OJHT] seawater metagenome; Sea water
989
917
-
Arg
CCT
[ENA]
¢þ
>WENV182592319
OJIR01000009
[OJIR] seawater metagenome; Sea water
26506
26434
-
Arg
CCT
[ENA]
¢þ
>WENV183053662
OLGP01000508
[OLGP] seawater metagenome; Sea water
1523
1451
-
Arg
CCT
[ENA]
¢þ
>WENV183054500
OLGU01000003
[OLGU] seawater metagenome; Sea water
147485
147557
+
Arg
CCT
[ENA]
¢þ
>WENV183054985
OLGW01000313
[OLGW] seawater metagenome; Sea water
3162
3090
-
Arg
CCT
[ENA]
¢þ
>WENV183058983
OLHS01000503
[OLHS] seawater metagenome; Sea water
1079
1151
+
Arg
CCT
[ENA]
¢þ
>WENV183059188
OLHU01000001
[OLHU] seawater metagenome; Sea water
147687
147759
+
Arg
CCT
[ENA]
¢þ
>WENV183060209
OLHX01000087
[OLHX] seawater metagenome; Sea water
4675
4603
-
Arg
CCT
[ENA]
¢þ
>WENV170568530
FLMP01047686
[FLMP] seawater metagenome; seawater
1155
1083
-
Arg
CCT
[ENA]
¢þ
>WENV170624090
FUWD013174962
[FUWD] metagenome; unknown
8632
8706
+
Arg
CCT
[ENA]
¢þ
>WENV170627255
FUWD013232416
[FUWD] metagenome; unknown
12306
12380
+
Arg
CCT
[ENA]
¢þ
>WENV170627256
FUWD013232420
[FUWD] metagenome; unknown
17869
17795
-
Arg
CCT
[ENA]
¢þ
>WENV170632375
FUWD013381221
[FUWD] metagenome; unknown
8632
8706
+
Arg
CCT
[ENA]
¢þ
>WENV170821119
MDSY01016806
[MDSY] marine metagenome; seawater
5510
5582
+
Arg
CCT
[ENA]
¢þ
>WENV170952773
MEHZ011613730
[MEHZ] marine metagenome; marine surface water
23335
23263
-
Arg
CCT
[ENA]
¢þ
>W141532255
JHET01000006
Actinomycetota
Microbacterium sp. CH12i [JHET]
81178
81250
+
Arg
CCT
[ENA]
¡û
>W141750786
JNSD01000013
Actinomycetota
actinobacterium acMicro-4 [JNSD]
279454
279526
+
Arg
CCT
[ENA]
¡û
>SRA1026350
SRR035085.191030
454 Sequencing (SRP001806)
181
107
-
Arg
CCT
[SRA]
>SRA1026473
SRR035085.213275
454 Sequencing (SRP001806)
181
107
-
Arg
CCT
[SRA]
>SRA1045729
SRR035093.158141
454 Sequencing (SRP001814)
392
464
+
Arg
CCT
[SRA]
>SRA1051613
SRR035098.38549
454 Sequencing (SRP001819)
207
133
-
Arg
CCT
[SRA]
>SRA1051672
SRR035098.55934
454 Sequencing (SRP001819)
50
122
+
Arg
CCT
[SRA]
>SRA1051682
SRR035098.57713
454 Sequencing (SRP001819)
207
133
-
Arg
CCT
[SRA]
>SRA1051820
SRR035098.82868
454 Sequencing (SRP001819)
50
122
+
Arg
CCT
[SRA]
>SRA1052526
SRR035098.220654
454 Sequencing (SRP001819)
144
72
-
Arg
CCT
[SRA]
>SRA1052536
SRR035098.222964
454 Sequencing (SRP001819)
190
116
-
Arg
CCT
[SRA]
>SRA1052723
SRR035098.261575
454 Sequencing (SRP001819)
134
206
+
Arg
CCT
[SRA]
>C161095692
CP016282
Actinomycetota
Cryobacterium arcticum PAMC 27867 [CP016282]
3094188
3094114
-
Arg
CCT
[Ensembl]
¡û
>W1610737822
LMOK01000002
Actinomycetota
Leifsonia sp. Leaf325 [LMOK]
665712
665786
+
Arg
CCT
[ENA]
¡û
>W1610738544
LMPA01000002
Actinomycetota
Plantibacter sp. Leaf171 [LMPA]
1067258
1067184
-
Arg
CCT
[ENA]
¡û
>W1610738571
LMPB01000001
Actinomycetota
Frigoribacterium sp. Leaf172 [LMPB]
819254
819328
+
Arg
CCT
[ENA]
¡û
>W1610754105
LNFD01000291
Actinomycetota
Actinomycetales bacterium Ga0077552 [LNFD]
12582
12508
-
Arg
CCT
[ENA]
¡û
>W1610918530
LSOE01000018
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
17719
17793
+
Arg
CCT
[ENA]
¡û
>W1610981920
LWCT01000046
Actinomycetota
Plantibacter sp. H53 [LWCT]
196996
196924
-
Arg
CCT
[ENA]
¡û
>W1710604678
FVZG01000004
Actinomycetota
Clavibacter michiganensis [FVZG]
135458
135532
+
Arg
CCT
[ENA]
¡û
Identical group No.399723 (5 seq.)
>WENV170623437
FUWD013151479
[FUWD] metagenome; unknown
768
842
+
Arg
CCT
[ENA]
¢þ
>WENV170631513
FUWD013355334
[FUWD] metagenome; unknown
5282
5356
+
Arg
CCT
[ENA]
¢þ
>SRA1026390
SRR035085.199968
454 Sequencing (SRP001806)
383
457
+
Arg
CCT
[SRA]
>SRA1026721
SRR035085.271358
454 Sequencing (SRP001806)
376
450
+
Arg
CCT
[SRA]
>SRA1044795
SRR035092.346566
454 Sequencing (SRP001813)
199
125
-
Arg
CCT
[SRA]
Identical group No.399772 (18 seq.)
>WENV170601743
FUWD010191354
[FUWD] metagenome; unknown
264
338
+
Arg
CCT
[ENA]
¢þ
>WENV170627291
FUWD013232509
[FUWD] metagenome; unknown
1050
1124
+
Arg
CCT
[ENA]
¢þ
>SRA1017794
SRR035082.197352
454 Sequencing (SRP001803)
338
264
-
Arg
CCT
[SRA]
>SRA1026821
SRR035085.303567
454 Sequencing (SRP001806)
87
161
+
Arg
CCT
[SRA]
>SRA1032948
SRR035088.137250
454 Sequencing (SRP001809)
85
159
+
Arg
CCT
[SRA]
>SRA1036187
SRR035089.465834
454 Sequencing (SRP001810)
317
243
-
Arg
CCT
[SRA]
>SRA1040094
SRR035091.37846
454 Sequencing (SRP001812)
10
84
+
Arg
CCT
[SRA]
>SRA1040879
SRR035091.163265
454 Sequencing (SRP001812)
328
254
-
Arg
CCT
[SRA]
>SRA1041604
SRR035091.268719
454 Sequencing (SRP001812)
319
394
+
Arg
CCT
[SRA]
>SRA1041881
SRR035091.310269
454 Sequencing (SRP001812)
75
149
+
Arg
CCT
[SRA]
>SRA1042951
SRR035091.472725
454 Sequencing (SRP001812)
53
127
+
Arg
CCT
[SRA]
>SRA1043936
SRR035092.197978
454 Sequencing (SRP001813)
168
94
-
Arg
CCT
[SRA]
>SRA1044001
SRR035092.208534
454 Sequencing (SRP001813)
314
240
-
Arg
CCT
[SRA]
>SRA1047872
SRR035094.59292
454 Sequencing (SRP001815)
425
351
-
Arg
CCT
[SRA]
>SRA1048862
SRR035094.265935
454 Sequencing (SRP001815)
100
26
-
Arg
CCT
[SRA]
>SRA1049065
SRR035095.13539
454 Sequencing (SRP001816)
306
380
+
Arg
CCT
[SRA]
>SRA1049206
SRR035095.38023
454 Sequencing (SRP001816)
309
383
+
Arg
CCT
[SRA]
>SRA1049446
SRR035095.79463
454 Sequencing (SRP001816)
417
343
-
Arg
CCT
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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