tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = CTG

HIT: 18 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281941 (7 seq.)
>WENV170623078 FUWD013135322 [FUWD] metagenome; unknown 239 311 + Gln CTG [ENA] ¢þ
>WENV170631317 FUWD013348194 [FUWD] metagenome; unknown 239 311 + Gln CTG [ENA] ¢þ
>SRA1025501 SRR035085.26097 454 Sequencing (SRP001806) 102 174 + Gln CTG [SRA]
>SRA1026121 SRR035085.147578 454 Sequencing (SRP001806) 249 321 + Gln CTG [SRA]
>SRA1030350 SRR035087.265842 454 Sequencing (SRP001808) 85 13 - Gln CTG [SRA]
>SRA1031672 SRR035087.468430 454 Sequencing (SRP001808) 272 200 - Gln CTG [SRA]
>SRA1043371 SRR035092.103833 454 Sequencing (SRP001813) 455 383 - Gln CTG [SRA]
Identical group No.281977 (2 seq.)
>SRA1025662 SRR035085.60458 454 Sequencing (SRP001806) 103 177 + Gln CTG [SRA]
>SRA1043488 SRR035092.124422 454 Sequencing (SRP001813) 265 339 + Gln CTG [SRA]
Identical group No.399684 (3 seq.)
>WENV170607849 FUWD010861021 [FUWD] metagenome; unknown 83 157 + Gln CTG [ENA] ¢þ
>SRA1026098 SRR035085.141883 454 Sequencing (SRP001806) 93 167 + Gln CTG [SRA]
>SRA1048556 SRR035094.198111 454 Sequencing (SRP001815) 369 295 - Gln CTG [SRA]
Identical group No.399710 (6 seq.)
>WENV180374658 OBOK01004944 [OBOK] marine metagenome; seawater 127 199 + Gln CTG [ENA] ¢þ
>WENV180586800 OCON01002381 [OCON] marine metagenome; seawater 1498 1427 - Gln CTG [ENA] ¢þ
>WENV182589372 OJID01001220 [OJID] seawater metagenome; Sea water 459 385 - Gln TTG [ENA] ¢þ
>WENV170569967 FLMP01369905 [FLMP] seawater metagenome; seawater 242 315 + Gln CTG [ENA] ¢þ
>SRA1024053 SRR035084.237947 454 Sequencing (SRP001805) 116 191 + Gln CTG [SRA]
>SRA1026315 SRR035085.184871 454 Sequencing (SRP001806) 182 257 + Gln CTG [SRA]
Identical group No.399736 (4 seq.)
>WENV170724426 LSQX01305235 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 54 128 + Gln CTG [ENA] ¢þ
>WENV170725499 LSQX01344552 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 591 665 + Gln CTG [ENA] ¢þ
>WENV170969617 MTKW01034630 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2221 2147 - Gln CTG [ENA] ¢þ
>SRA1026475 SRR035085.213659 454 Sequencing (SRP001806) 17 91 + Gln CTG [SRA]
Identical group No.399771 (5 seq.)
>WENV170612291 FUWD012565605 [FUWD] metagenome; unknown 113 39 - Gln CTG [ENA] ¢þ
>SRA1026794 SRR035085.292589 454 Sequencing (SRP001806) 125 199 + Gln CTG [SRA]
>SRA1034216 SRR035089.26233 454 Sequencing (SRP001810) 209 135 - Gln CTG [SRA]
>SRA1034224 SRR035089.28069 454 Sequencing (SRP001810) 209 135 - Gln CTG [SRA]
>SRA1035347 SRR035089.287771 454 Sequencing (SRP001810) 209 135 - Gln CTG [SRA]
Identical group No.480661 (5 seq.)
>WENV180059004 MPLX02085293 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 4970 5043 + Gln CTG [ENA] ¢þ
>WENV170692541 LGOV01012697 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 10 83 + Gln CTG [ENA] ¢þ
>WENV170695187 LGVE01057638 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1167 1094 - Gln CTG [ENA] ¢þ
>WENV170698969 LGVF01450129 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 142 69 - Gln CTG [ENA] ¢þ
>SRA1025535 SRR035085.35031 454 Sequencing (SRP001806) 55 128 + Gln CTG [SRA]
Identical group No.480669 (13 seq.)
>W131157566 AQSK01000206 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 34123 34196 + Gln CTG [ENA] ¡û
>W131157631 AQSM01000150 Unclassified Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM] 176 103 - Gln CTG [ENA] ¡û
>W131192174 ASKQ01000029 Unclassified Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ] 94 21 - Gln CTG [ENA] ¡û
>W131192942 ASNH01000025 Unclassified Cloacimonetes bacterium SCGC AAA255-C20 KSB1 bacterium SCGC AAA255-C20 [ASNH] 7145 7218 + Gln CTG [ENA] ¡û
>W131192987 ASNI01000022 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 8485 8412 - Gln CTG [ENA] ¡û
>W131193061 ASNM01000043 Unclassified Cloacimonetes bacterium SCGC AAA252-G08 KSB1 bacterium SCGC AAA252-G08 [ASNM] 13515 13588 + Gln CTG [ENA] ¡û
>W131193143 ASNQ01000022 Unclassified Cloacimonetes bacterium SCGC AAA252-K16 KSB1 bacterium SCGC AAA252-K16 [ASNQ] 9133 9060 - Gln CTG [ENA] ¡û
>W131193200 ASNT01000035 Unclassified Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT] 17160 17233 + Gln CTG [ENA] ¡û
>W141139676 AWNX01000008 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 4438 4365 - Gln CTG [ENA] ¡û
>WENV170625245 FUWD013193950 [FUWD] metagenome; unknown 4788 4715 - Gln CTG [ENA] ¢þ
>WENV170633490 FUWD013396907 [FUWD] metagenome; unknown 4788 4715 - Gln CTG [ENA] ¢þ
>SRA1025632 SRR035085.53463 454 Sequencing (SRP001806) 327 402 + Gln CTG [SRA]
>SRA1048413 SRR035094.167069 454 Sequencing (SRP001815) 298 225 - Gln CTG [SRA]
Identical group No.480677 (12 seq.)
>WENV180346243 OBLN01046674 [OBLN] sediment metagenome; sediment 297 369 + Gln CTG [ENA] ¢þ
>WENV170611845 FUWD012416531 [FUWD] metagenome; unknown 493 420 - Gln CTG [ENA] ¢þ
>WENV170678280 LDZT01012911 [LDZT] terrestrial metagenome; oil reservoir sample SB1 201 128 - Gln CTG [ENA] ¢þ
>WENV170678336 LDZT01013906 [LDZT] terrestrial metagenome; oil reservoir sample SB1 2219 2292 + Gln CTG [ENA] ¢þ
>WENV170678813 LDZU01004918 [LDZU] terrestrial metagenome; oil reservoir sample SB2 11880 11953 + Gln CTG [ENA] ¢þ
>WENV170977129 MTKZ01017247 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 323 395 + Gln CTG [ENA] ¢þ
>SRA1025722 SRR035085.71183 454 Sequencing (SRP001806) 291 218 - Gln CTG [SRA]
>SRA1025815 SRR035085.88307 454 Sequencing (SRP001806) 507 434 - Gln CTG [SRA]
>SRA1031070 SRR035087.368023 454 Sequencing (SRP001808) 241 314 + Gln CTG [SRA]
>SRA1031629 SRR035087.462212 454 Sequencing (SRP001808) 242 315 + Gln CTG [SRA]
>W1610614331 LGHA01000011 Chloroflexota Anaerolineaceae bacterium 46_22 46_22 [LGHA] 11880 11953 + Gln CTG [ENA] ¡û
>W1710735414 LGHA01000011 Chloroflexota Anaerolineaceae bacterium 46_22 46_22 [LGHA] 11880 11953 + Gln CTG [ENA] ¡û
Identical group No.480688 (9 seq.)
>WENV170621243 FUWD013053582 [FUWD] metagenome; unknown 817 746 - Gln CTG [ENA] ¢þ
>WENV170629423 FUWD013270080 [FUWD] metagenome; unknown 817 746 - Gln CTG [ENA] ¢þ
>SRA1017852 SRR035082.206485 454 Sequencing (SRP001803) 374 303 - Gln CTG [SRA]
>SRA1018100 SRR035082.240488 454 Sequencing (SRP001803) 202 131 - Gln CTG [SRA]
>SRA1025957 SRR035085.116694 454 Sequencing (SRP001806) 226 297 + Gln CTG [SRA]
>SRA1028791 SRR035087.8142 454 Sequencing (SRP001808) 392 321 - Gln CTG [SRA]
>SRA1031314 SRR035087.410715 454 Sequencing (SRP001808) 94 165 + Gln CTG [SRA]
>SRA1044055 SRR035092.215370 454 Sequencing (SRP001813) 353 282 - Gln CTG [SRA]
>SRA1044482 SRR035092.286919 454 Sequencing (SRP001813) 331 258 - Gln CTG [SRA]
Identical group No.480694 (12 seq.)
>WENV170600491 FUWD010129435 [FUWD] metagenome; unknown 117 44 - Gln CTG [ENA] ¢þ
>WENV170620474 FUWD013032336 [FUWD] metagenome; unknown 1922 1995 + Gln CTG [ENA] ¢þ
>WENV170628617 FUWD013249803 [FUWD] metagenome; unknown 1922 1995 + Gln CTG [ENA] ¢þ
>SRA1026055 SRR035085.132829 454 Sequencing (SRP001806) 549 476 - Gln CTG [SRA]
>SRA1029110 SRR035087.75595 454 Sequencing (SRP001808) 117 44 - Gln CTG [SRA]
>SRA1040185 SRR035091.54878 454 Sequencing (SRP001812) 72 1 - Gln CTG [SRA]
>SRA1040717 SRR035091.136161 454 Sequencing (SRP001812) 15 88 + Gln CTG [SRA]
>SRA1040816 SRR035091.153638 454 Sequencing (SRP001812) 371 444 + Gln CTG [SRA]
>SRA1043491 SRR035092.124538 454 Sequencing (SRP001813) 310 383 + Gln CTG [SRA]
>SRA1043645 SRR035092.154925 454 Sequencing (SRP001813) 237 310 + Gln CTG [SRA]
>SRA1044922 SRR035092.373176 454 Sequencing (SRP001813) 57 130 + Gln CTG [SRA]
>SRA1049833 SRR035095.145098 454 Sequencing (SRP001816) 116 43 - Gln CTG [SRA]
Identical group No.480702 (16 seq.)
>WENV170598893 FUWD010053912 [FUWD] metagenome; unknown 187 260 + Gln CTG [ENA] ¢þ
>WENV170624169 FUWD013176622 [FUWD] metagenome; unknown 1724 1651 - Gln CTG [ENA] ¢þ
>WENV170624455 FUWD013181990 [FUWD] metagenome; unknown 1373 1446 + Gln CTG [ENA] ¢þ
>WENV170624456 FUWD013181991 [FUWD] metagenome; unknown 288 361 + Gln CTG [ENA] ¢þ
>WENV170632449 FUWD013382537 [FUWD] metagenome; unknown 1724 1651 - Gln CTG [ENA] ¢þ
>WENV170632741 FUWD013386847 [FUWD] metagenome; unknown 288 361 + Gln CTG [ENA] ¢þ
>SRA1026178 SRR035085.158923 454 Sequencing (SRP001806) 244 171 - Gln CTG [SRA]
>SRA1026678 SRR035085.257328 454 Sequencing (SRP001806) 86 159 + Gln CTG [SRA]
>SRA1030992 SRR035087.358104 454 Sequencing (SRP001808) 158 85 - Gln CTG [SRA]
>SRA1032120 SRR035087.556989 454 Sequencing (SRP001808) 187 260 + Gln CTG [SRA]
>SRA1032245 SRR035087.584968 454 Sequencing (SRP001808) 150 77 - Gln CTG [SRA]
>SRA1034071 SRR035088.474718 454 Sequencing (SRP001809) 153 80 - Gln CTG [SRA]
>SRA1047865 SRR035094.58218 454 Sequencing (SRP001815) 80 153 + Gln CTG [SRA]
>SRA1047900 SRR035094.64184 454 Sequencing (SRP001815) 377 304 - Gln CTG [SRA]
>SRA1049140 SRR035095.27125 454 Sequencing (SRP001816) 506 433 - Gln CTG [SRA]
>SRA1050431 SRR035095.261976 454 Sequencing (SRP001816) 243 316 + Gln CTG [SRA]
Identical group No.480707 (7 seq.)
>WENV170621059 FUWD013047858 [FUWD] metagenome; unknown 1043 973 - Gln CTG [ENA] ¢þ
>WENV170629226 FUWD013264622 [FUWD] metagenome; unknown 1043 973 - Gln CTG [ENA] ¢þ
>SRA1026311 SRR035085.184197 454 Sequencing (SRP001806) 136 66 - Gln CTG [SRA]
>SRA1029875 SRR035087.195497 454 Sequencing (SRP001808) 480 410 - Gln CTG [SRA]
>SRA1032475 SRR035088.19139 454 Sequencing (SRP001809) 119 189 + Gln CTG [SRA]
>SRA1039149 SRR035090.432716 454 Sequencing (SRP001811) 56 126 + Gln CTG [SRA]
>SRA1054754 SRR035099.207087 454 Sequencing (SRP001820) 198 127 - Gln CTG [SRA]
Identical group No.480712 (2 seq.)
>WENV170970787 MTKW01088894 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 429 357 - Gln CTG [ENA] ¢þ
>SRA1026421 SRR035085.204731 454 Sequencing (SRP001806) 278 205 - Gln CTG [SRA]
Identical group No.480713 (2 seq.)
>WENV170607859 FUWD010862066 [FUWD] metagenome; unknown 406 336 - Gln CTG [ENA] ¢þ
>SRA1026444 SRR035085.208175 454 Sequencing (SRP001806) 415 345 - Gln CTG [SRA]
Identical group No.480729 (19 seq.)
>W131162450 AQYX01000136 Atribacterota Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX] 5104 5031 - Gln CTG [ENA] ¡û
>W131193756 ASPA01000003 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 63976 63903 - Gln CTG [ENA] ¡û
>W131193787 ASPB01000014 Atribacterota Atribacteria bacterium SCGC AB-164-D21 OP9 bacterium SCGC AB-164-D21 [ASPB] 5096 5023 - Gln CTG [ENA] ¡û
>W131193798 ASPC01000010 Atribacterota Atribacteria bacterium SCGC AAA255-N14 OP9 bacterium SCGC AAA255-N14 [ASPC] 29952 29879 - Gln CTG [ENA] ¡û
>W141139551 AWNT01000047 Atribacterota Atribacteria bacterium JGI OTU-1 [AWNT] 648 575 - Gln CTG [ENA] ¡û
>WENV170607715 FUWD010850959 [FUWD] metagenome; unknown 239 166 - Gln CTG [ENA] ¢þ
>WENV170617761 FUWD012936163 [FUWD] metagenome; unknown 786 713 - Gln CTG [ENA] ¢þ
>WENV170620363 FUWD013030485 [FUWD] metagenome; unknown 339 412 + Gln CTG [ENA] ¢þ
>WENV170628500 FUWD013248056 [FUWD] metagenome; unknown 339 412 + Gln CTG [ENA] ¢þ
>SRA1018010 SRR035082.226996 454 Sequencing (SRP001803) 227 154 - Gln CTG [SRA]
>SRA1018843 SRR035082.355627 454 Sequencing (SRP001803) 263 189 - Gln CTG [SRA]
>SRA1026722 SRR035085.272064 454 Sequencing (SRP001806) 164 237 + Gln CTG [SRA]
>SRA1029373 SRR035087.118459 454 Sequencing (SRP001808) 291 218 - Gln CTG [SRA]
>SRA1030713 SRR035087.317663 454 Sequencing (SRP001808) 306 233 - Gln CTG [SRA]
>SRA1031702 SRR035087.474171 454 Sequencing (SRP001808) 107 180 + Gln CTG [SRA]
>SRA1034107 SRR035088.490737 454 Sequencing (SRP001809) 77 150 + Gln CTG [SRA]
>SRA1035560 SRR035089.330567 454 Sequencing (SRP001810) 199 126 - Gln CTG [SRA]
>SRA1048953 SRR035094.296306 454 Sequencing (SRP001815) 26 99 + Gln CTG [SRA]
>SRA1049370 SRR035095.65297 454 Sequencing (SRP001816) 223 296 + Gln CTG [SRA]
Identical group No.480734 (3 seq.)
>WENV170611910 FUWD012436351 [FUWD] metagenome; unknown 234 305 + Gln CTG [ENA] ¢þ
>SRA1026769 SRR035085.285183 454 Sequencing (SRP001806) 245 316 + Gln CTG [SRA]
>SRA1048479 SRR035094.182836 454 Sequencing (SRP001815) 226 155 - Gln CTG [SRA]
Identical group No.480735 (16 seq.)
>WENV170603359 FUWD010305329 [FUWD] metagenome; unknown 527 600 + Gln CTG [ENA] ¢þ
>WENV170625363 FUWD013196638 [FUWD] metagenome; unknown 981 1054 + Gln CTG [ENA] ¢þ
>WENV170633603 FUWD013399285 [FUWD] metagenome; unknown 981 1054 + Gln CTG [ENA] ¢þ
>SRA1026803 SRR035085.295011 454 Sequencing (SRP001806) 288 361 + Gln CTG [SRA]
>SRA1032482 SRR035088.22431 454 Sequencing (SRP001809) 119 193 + Gln CTG [SRA]
>SRA1033082 SRR035088.169129 454 Sequencing (SRP001809) 248 321 + Gln CTG [SRA]
>SRA1033285 SRR035088.214552 454 Sequencing (SRP001809) 264 337 + Gln CTG [SRA]
>SRA1033600 SRR035088.299055 454 Sequencing (SRP001809) 57 130 + Gln CTG [SRA]
>SRA1033683 SRR035088.323150 454 Sequencing (SRP001809) 81 8 - Gln CTG [SRA]
>SRA1033835 SRR035088.369513 454 Sequencing (SRP001809) 94 21 - Gln CTG [SRA]
>SRA1033850 SRR035088.377365 454 Sequencing (SRP001809) 50 123 + Gln CTG [SRA]
>SRA1042278 SRR035091.366840 454 Sequencing (SRP001812) 183 256 + Gln CTG [SRA]
>SRA1047990 SRR035094.83422 454 Sequencing (SRP001815) 167 94 - Gln CTG [SRA]
>SRA1049281 SRR035095.49769 454 Sequencing (SRP001816) 275 348 + Gln CTG [SRA]
>SRA1049394 SRR035095.70031 454 Sequencing (SRP001816) 45 118 + Gln CTG [SRA]
>SRA1054460 SRR035099.136915 454 Sequencing (SRP001820) 270 343 + Gln CTG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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