tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = TTC

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.155940 (8 seq.)
>W1711421213 MHYD01000031 Planctomycetota Planctomycetes bacterium RBG_13_46_10 [MHYD] 332 258 - Glu TTC [ENA] ¡û
>WENV183512858 OMKS01001608 [OMKS] sediment metagenome; hot spring sediment 8215 8291 + Glu TTC [ENA] ¢þ
>WENV183514542 OMKS01022219 [OMKS] sediment metagenome; hot spring sediment 925 851 - Glu TTC [ENA] ¢þ
>WENV183806104 PVBE011085057 [PVBE] marine metagenome; water 911 835 - Glu TTC [ENA] ¢þ
>WENV170016687 BARS01001052 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 444 368 - Glu TTC [ENA] ¢þ
>WENV170016904 BARS01025282 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 571 495 - Glu TTC [ENA] ¢þ
>WENV170017333 BART01016896 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 171 95 - Glu TTC [ENA] ¢þ
>SRA1026424 SRR035085.205046 454 Sequencing (SRP001806) 213 139 - Glu TTC [SRA]
Identical group No.155941 (2 seq.)
>WENV170001050 AGBJ01001551 [AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East 317 394 + Glu TTC [ENA] ¢þ
>SRA1026440 SRR035085.207271 454 Sequencing (SRP001806) 76 153 + Glu TTC [SRA]
Identical group No.177382 (5 seq.)
>WENV170441547 CEUV01210571 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4 80 + Glu TTC [ENA] ¢þ
>WENV170467704 CEVE01243153 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 689 613 - Glu TTC [ENA] ¢þ
>WENV170612776 FUWD012686392 [FUWD] metagenome; unknown 201 277 + Glu TTC [ENA] ¢þ
>SRA1026090 SRR035085.140992 454 Sequencing (SRP001806) 107 31 - Glu TTC [SRA]
>SRA1050643 SRR035095.311438 454 Sequencing (SRP001816) 415 339 - Glu TTC [SRA]
Identical group No.177432 (3 seq.)
>WENV170612631 FUWD012648253 [FUWD] metagenome; unknown 194 267 + Glu TTC [ENA] ¢þ
>SRA1026427 SRR035085.205749 454 Sequencing (SRP001806) 181 108 - Glu TTC [SRA]
>SRA1043928 SRR035092.196137 454 Sequencing (SRP001813) 194 267 + Glu TTC [SRA]
Identical group No.281933 (12 seq.)
>W131193328 ASOB01000011 Unclassified Acetothermia bacterium SCGC AAA255-C06 OP1 bacterium SCGC AAA255-C06 [ASOB] 2710 2785 + Glu TTC [ENA] ¡û
>WENV183516304 OMKS01156007 [OMKS] sediment metagenome; hot spring sediment 135 60 - Glu TTC [ENA] ¢þ
>WENV170607835 FUWD010859527 [FUWD] metagenome; unknown 410 337 - Glu TTC [ENA] ¢þ
>WENV170779064 LZCG01000250 [LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir 2318 2393 + Glu TTC [ENA] ¢þ
>SRA1025472 SRR035085.18584 454 Sequencing (SRP001806) 151 226 + Glu TTC [SRA]
>SRA1025641 SRR035085.55200 454 Sequencing (SRP001806) 254 181 - Glu TTC [SRA]
>SRA1025706 SRR035085.69903 454 Sequencing (SRP001806) 25 98 + Glu TTC [SRA]
>SRA1026040 SRR035085.131818 454 Sequencing (SRP001806) 25 98 + Glu TTC [SRA]
>SRA1026046 SRR035085.132141 454 Sequencing (SRP001806) 25 98 + Glu TTC [SRA]
>SRA1026093 SRR035085.141319 454 Sequencing (SRP001806) 153 228 + Glu TTC [SRA]
>SRA1026233 SRR035085.168451 454 Sequencing (SRP001806) 112 185 + Glu TTC [SRA]
>SRA1026448 SRR035085.208683 454 Sequencing (SRP001806) 10 83 + Glu TTC [SRA]
Identical group No.282004 (16 seq.)
>WENV170615976 FUWD012873352 [FUWD] metagenome; unknown 91 16 - Glu TTC [ENA] ¢þ
>WENV170624180 FUWD013177114 [FUWD] metagenome; unknown 2379 2304 - Glu TTC [ENA] ¢þ
>WENV170632464 FUWD013382943 [FUWD] metagenome; unknown 2379 2304 - Glu TTC [ENA] ¢þ
>SRA1025772 SRR035085.80386 454 Sequencing (SRP001806) 149 224 + Glu TTC [SRA]
>SRA1026349 SRR035085.190911 454 Sequencing (SRP001806) 234 309 + Glu TTC [SRA]
>SRA1029058 SRR035087.67615 454 Sequencing (SRP001808) 100 175 + Glu TTC [SRA]
>SRA1029137 SRR035087.79394 454 Sequencing (SRP001808) 390 315 - Glu TTC [SRA]
>SRA1029167 SRR035087.86178 454 Sequencing (SRP001808) 82 7 - Glu TTC [SRA]
>SRA1031889 SRR035087.506055 454 Sequencing (SRP001808) 91 16 - Glu TTC [SRA]
>SRA1035520 SRR035089.323038 454 Sequencing (SRP001810) 58 133 + Glu TTC [SRA]
>SRA1035698 SRR035089.356564 454 Sequencing (SRP001810) 275 200 - Glu TTC [SRA]
>SRA1047706 SRR035094.25493 454 Sequencing (SRP001815) 229 304 + Glu TTC [SRA]
>SRA1047886 SRR035094.61648 454 Sequencing (SRP001815) 112 187 + Glu TTC [SRA]
>SRA1048040 SRR035094.96881 454 Sequencing (SRP001815) 112 187 + Glu TTC [SRA]
>SRA1048280 SRR035094.138893 454 Sequencing (SRP001815) 33 108 + Glu TTC [SRA]
>SRA1048349 SRR035094.153267 454 Sequencing (SRP001815) 125 200 + Glu TTC [SRA]
Identical group No.282011 (3 seq.)
>WENV170611490 FUWD012330782 [FUWD] metagenome; unknown 181 256 + Glu TTC [ENA] ¢þ
>SRA1016961 SRR035082.60927 454 Sequencing (SRP001803) 181 256 + Glu TTC [SRA]
>SRA1025814 SRR035085.88129 454 Sequencing (SRP001806) 119 44 - Glu TTC [SRA]
Identical group No.282045 (7 seq.)
>WENV183512267 OMKS01000194 [OMKS] sediment metagenome; hot spring sediment 52326 52399 + Glu TTC [ENA] ¢þ
>WENV170603326 FUWD010302346 [FUWD] metagenome; unknown 152 228 + Glu TTC [ENA] ¢þ
>SRA1026016 SRR035085.127276 454 Sequencing (SRP001806) 118 194 + Glu TTC [SRA]
>SRA1028818 SRR035087.14707 454 Sequencing (SRP001808) 130 206 + Glu TTC [SRA]
>SRA1029673 SRR035087.161783 454 Sequencing (SRP001808) 342 266 - Glu TTC [SRA]
>SRA1034530 SRR035089.116502 454 Sequencing (SRP001810) 152 228 + Glu TTC [SRA]
>W1610004860 AHKP01000003 Euryarchaeota Methanoplanus limicola DSM 2279 [AHKP] 78862 78936 + Glu TTC [ENA] ¡û
Identical group No.399601 (4 seq.)
>WENV170626667 FUWD013228169 [FUWD] metagenome; unknown 830 758 - Glu TTC [ENA] ¢þ
>SRA1025478 SRR035085.19042 454 Sequencing (SRP001806) 181 109 - Glu TTC [SRA]
>SRA1025498 SRR035085.25480 454 Sequencing (SRP001806) 181 109 - Glu TTC [SRA]
>SRA1029403 SRR035087.122127 454 Sequencing (SRP001808) 106 34 - Glu TTC [SRA]
Identical group No.399603 (24 seq.)
>W131157549 AQSK01000184 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 7619 7693 + Glu TTC [ENA] ¡û
>W131157626 AQSM01000141 Unclassified Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM] 16670 16744 + Glu TTC [ENA] ¡û
>W131157681 AQSO01000162 Unclassified Cloacimonetes bacterium SCGC AAA252-D03 KSB1 bacterium SCGC AAA252-D03 [AQSO] 24439 24365 - Glu TTC [ENA] ¡û
>W131192102 ASKM01000004 Unclassified Cloacimonetes bacterium SCGC AAA252-N05 KSB1 bacterium SCGC AAA252-N05 [ASKM] 34812 34738 - Glu TTC [ENA] ¡û
>W131192127 ASKN01000056 Unclassified Cloacimonetes bacterium SCGC AAA252-F02 KSB1 bacterium SCGC AAA252-F02 [ASKN] 261 335 + Glu TTC [ENA] ¡û
>W131192139 ASKO01000016 Unclassified Cloacimonetes bacterium SCGC AAA252-M08 KSB1 bacterium SCGC AAA252-M08 [ASKO] 31559 31485 - Glu TTC [ENA] ¡û
>W131192183 ASKQ01000075 Unclassified Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ] 7298 7372 + Glu TTC [ENA] ¡û
>W131192925 ASNG01000021 Unclassified Cloacimonetes bacterium SCGC AAA252-O02 KSB1 bacterium SCGC AAA252-O02 [ASNG] 9366 9292 - Glu TTC [ENA] ¡û
>W131192982 ASNI01000021 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 32807 32733 - Glu TTC [ENA] ¡û
>W131193005 ASNJ01000027 Unclassified Cloacimonetes bacterium SCGC AAA252-N11 KSB1 bacterium SCGC AAA252-N11 [ASNJ] 11102 11176 + Glu TTC [ENA] ¡û
>W131193034 ASNK01000049 Unclassified Cloacimonetes bacterium SCGC AAA252-E20 KSB1 bacterium SCGC AAA252-E20 [ASNK] 1921 1995 + Glu TTC [ENA] ¡û
>W131193089 ASNN01000065 Unclassified Cloacimonetes bacterium SCGC AAA252-I11 KSB1 bacterium SCGC AAA252-I11 [ASNN] 7149 7223 + Glu TTC [ENA] ¡û
>W131193120 ASNO01000038 Unclassified Cloacimonetes bacterium SCGC AAA252-I16 KSB1 bacterium SCGC AAA252-I16 [ASNO] 12242 12316 + Glu TTC [ENA] ¡û
>W131193170 ASNS01000020 Unclassified Cloacimonetes bacterium SCGC AAA252-P02 KSB1 bacterium SCGC AAA252-P02 [ASNS] 12241 12315 + Glu TTC [ENA] ¡û
>W131193191 ASNT01000027 Unclassified Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT] 16726 16800 + Glu TTC [ENA] ¡û
>W141139690 AWNX01000036 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 23714 23640 - Glu TTC [ENA] ¡û
>W141139717 AWNY01000018 Unclassified Cloacimonetes bacterium JGI OTU-2 [AWNY] 24439 24365 - Glu TTC [ENA] ¡û
>WENV170624984 FUWD013189453 [FUWD] metagenome; unknown 2909 2835 - Glu TTC [ENA] ¢þ
>WENV170633244 FUWD013393053 [FUWD] metagenome; unknown 2909 2835 - Glu TTC [ENA] ¢þ
>SRA1025480 SRR035085.19583 454 Sequencing (SRP001806) 101 175 + Glu TTC [SRA]
>SRA1025751 SRR035085.76480 454 Sequencing (SRP001806) 102 176 + Glu TTC [SRA]
>SRA1029901 SRR035087.198904 454 Sequencing (SRP001808) 122 48 - Glu TTC [SRA]
>SRA1030769 SRR035087.329414 454 Sequencing (SRP001808) 540 466 - Glu TTC [SRA]
>SRA1034831 SRR035089.181719 454 Sequencing (SRP001810) 74 148 + Glu TTC [SRA]
Identical group No.399639 (27 seq.)
>WENV180296479 OBJA01000640 [OBJA] soil metagenome; sediment, water from around vicinity 28585 28511 - Glu TTC [ENA] ¢þ
>WENV181118948 OEFH01053685 [OEFH] human metagenome; G_DNA_Stool 442 516 + Glu TTC [ENA] ¢þ
>WENV181346640 OFML01061369 [OFML] human gut metagenome; human gut 480 554 + Glu TTC [ENA] ¢þ
>WENV182125048 OHJS01000424 [OHJS] human gut metagenome; feces 16474 16548 + Glu TTC [ENA] ¢þ
>WENV182127038 OHJU01003348 [OHJU] human gut metagenome; feces 5193 5267 + Glu TTC [ENA] ¢þ
>WENV182180533 OHNO01002184 [OHNO] human gut metagenome; feces 1690 1764 + Glu TTC [ENA] ¢þ
>WENV182331631 OHZI01018279 [OHZI] human gut metagenome; feces 65 139 + Glu TTC [ENA] ¢þ
>WENV182358084 OIBU01001086 [OIBU] human gut metagenome; feces 7702 7775 + Glu TTC [ENA] ¢þ
>WENV182613738 OJKA01009304 [OJKA] metagenome; faeces 1091 1020 - Glu TTC [ENA] ¢þ
>WENV182782194 OJSE01071275 [OJSE] human gut metagenome; human gut 482 408 - Glu TTC [ENA] ¢þ
>WENV183194140 OLPS01027027 [OLPS] human gut metagenome; faeces 582 508 - Glu TTC [ENA] ¢þ
>WENV183293283 OLSK01000188 [OLSK] human gut metagenome; faeces 59154 59228 + Glu TTC [ENA] ¢þ
>WENV183722270 PDWJ01115883 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 578 504 - Glu TTC [ENA] ¢þ
>WENV170070705 CDZQ01033557 [CDZQ] gut metagenome; human stools 26950 27024 + Glu TTC [ENA] ¢þ
>WENV170070746 CDZQ01035069 [CDZQ] gut metagenome; human stools 17593 17519 - Glu TTC [ENA] ¢þ
>WENV170561197 CZCA01004181 [CZCA] anaerobic digester metagenome; anaerobic digester 3748 3822 + Glu TTC [ENA] ¢þ
>WENV170562248 CZCB01001558 [CZCB] anaerobic digester metagenome; anaerobic digester 471 397 - Glu TTC [ENA] ¢þ
>WENV170563768 CZCB01028860 [CZCB] anaerobic digester metagenome; anaerobic digester 3368 3442 + Glu TTC [ENA] ¢þ
>WENV170645287 JMSV01000021 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 32005 32079 + Glu TTC [ENA] ¢þ
>WENV170645447 JMSV01005166 [JMSV] bioreactor metagenome; Culture-2 Bioreactor Bmz derived from microbial biomass from the upper 2 cm of a marine 434 508 + Glu TTC [ENA] ¢þ
>WENV170683934 LFRM01010694 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 4026 3952 - Glu TTC [ENA] ¢þ
>WENV170685407 LFRM01089817 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 249 175 - Glu TTC [ENA] ¢þ
>WENV170716891 LSQX01015666 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 2535 2461 - Glu TTC [ENA] ¢þ
>WENV170967397 MTKW01001223 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 13964 13890 - Glu TTC [ENA] ¢þ
>WENV170967799 MTKW01003584 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 16075 16149 + Glu TTC [ENA] ¢þ
>SRA1025757 SRR035085.77927 454 Sequencing (SRP001806) 284 210 - Glu TTC [SRA]
>SRA1031532 SRR035087.445479 454 Sequencing (SRP001808) 303 229 - Glu TTC [SRA]
Identical group No.399647 (3 seq.)
>WENV170571129 FLOH01000075 [FLOH] marine metagenome; water 192880 192808 - Glu TTC [ENA] ¢þ
>WENV170602719 FUWD010257517 [FUWD] metagenome; unknown 380 308 - Glu TTC [ENA] ¢þ
>SRA1025808 SRR035085.87302 454 Sequencing (SRP001806) 471 399 - Glu TTC [SRA]
Identical group No.399658 (6 seq.)
>WENV180091850 MPMF02224374 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 2928 3002 + Glu TTC [ENA] ¢þ
>WENV180092020 MPMF02234402 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 274 348 + Glu TTC [ENA] ¢þ
>WENV183802673 PVBE010777783 [PVBE] marine metagenome; water 3107 3181 + Glu TTC [ENA] ¢þ
>WENV170612006 FUWD012480960 [FUWD] metagenome; unknown 180 254 + Glu TTC [ENA] ¢þ
>SRA1025888 SRR035085.103413 454 Sequencing (SRP001806) 302 228 - Glu TTC [SRA]
>SRA1042923 SRR035091.467797 454 Sequencing (SRP001812) 140 66 - Glu TTC [SRA]
Identical group No.399691 (4 seq.)
>WENV170623440 FUWD013151533 [FUWD] metagenome; unknown 1012 1086 + Glu TTC [ENA] ¢þ
>WENV170631707 FUWD013362492 [FUWD] metagenome; unknown 1012 1086 + Glu TTC [ENA] ¢þ
>SRA1026163 SRR035085.156278 454 Sequencing (SRP001806) 88 14 - Glu TTC [SRA]
>SRA1043223 SRR035092.75882 454 Sequencing (SRP001813) 54 128 + Glu TTC [SRA]
Identical group No.399711 (2 seq.)
>SRA1026328 SRR035085.186443 454 Sequencing (SRP001806) 121 49 - Glu TTC [SRA]
>SRA1044529 SRR035092.294524 454 Sequencing (SRP001813) 299 371 + Glu TTC [SRA]
Identical group No.399739 (3 seq.)
>W1910706203 MFES01000003 Unclassified Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_46_11 [MFES] 3081 3155 + Glu TTC [ENA] ¡û
>SRA1026502 SRR035085.217642 454 Sequencing (SRP001806) 309 381 + Glu TTC [SRA]
>SRA1044810 SRR035092.349588 454 Sequencing (SRP001813) 431 359 - Glu TTC [SRA]
Identical group No.399753 (14 seq.)
>W1711418704 MHKQ01000014 Unclassified Candidatus Komeilibacteria bacterium RIFOXYC1_FULL_37_11 [MHKQ] 9273 9347 + Glu TTC [ENA] ¡û
>W1711418785 MHKS01000005 Unclassified Candidatus Komeilibacteria bacterium RIFOXYD1_FULL_37_29 [MHKS] 90571 90645 + Glu TTC [ENA] ¡û
>W1711418812 MHKT01000038 Unclassified Candidatus Komeilibacteria bacterium RIFOXYD2_FULL_37_8 [MHKT] 2334 2260 - Glu TTC [ENA] ¡û
>WENV170605204 FUWD010457888 [FUWD] metagenome; unknown 223 149 - Glu TTC [ENA] ¢þ
>WENV170608179 FUWD010899430 [FUWD] metagenome; unknown 79 151 + Glu TTC [ENA] ¢þ
>WENV170608213 FUWD010902979 [FUWD] metagenome; unknown 77 5 - Glu TTC [ENA] ¢þ
>SRA1016901 SRR035082.49717 454 Sequencing (SRP001803) 184 258 + Glu TTC [SRA]
>SRA1026605 SRR035085.238828 454 Sequencing (SRP001806) 169 241 + Glu TTC [SRA]
>SRA1029747 SRR035087.174803 454 Sequencing (SRP001808) 257 183 - Glu TTC [SRA]
>SRA1029873 SRR035087.195332 454 Sequencing (SRP001808) 96 24 - Glu TTC [SRA]
>SRA1038890 SRR035090.389045 454 Sequencing (SRP001811) 267 195 - Glu TTC [SRA]
>SRA1048408 SRR035094.166708 454 Sequencing (SRP001815) 256 182 - Glu TTC [SRA]
>SRA1049916 SRR035095.159669 454 Sequencing (SRP001816) 214 286 + Glu TTC [SRA]
>SRA1050710 SRR035095.334490 454 Sequencing (SRP001816) 214 286 + Glu TTC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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