tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001807)

Anticodon = CAC

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.261016 (1 seq.)
>SRA1028456 SRR035086.329905 454 Sequencing (SRP001807) 290 216 - Val CAC [SRA]
Identical group No.467820 (70 seq.)
>WENV180393052 OBPP01061992 [OBPP] marine metagenome; ENVO:00002042 224 297 + Val CAC [ENA]
>WENV180398929 OBQE01000157 [OBQE] marine metagenome; ENVO.00002150 250 177 - Val CAC [ENA]
>WENV180635929 OCRE01026714 [OCRE] marine metagenome; Seawater 329 257 - Val CAC [ENA]
>WENV180637941 OCRG01197835 [OCRG] marine metagenome; seawater 74 2 - Val CAC [ENA]
>WENV170424646 CEUP01001947 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 259 331 + Val CAC [ENA]
>WENV170424683 CEUP01003379 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 508 582 + Val CAC [ENA]
>WENV170599000 FUWD010057609 [FUWD] metagenome; unknown 74 2 - Val CAC [ENA]
>WENV170599356 FUWD010072340 [FUWD] metagenome; unknown 145 73 - Val CAC [ENA]
>WENV170599499 FUWD010077173 [FUWD] metagenome; unknown 230 158 - Val CAC [ENA]
>WENV170617032 FUWD012911683 [FUWD] metagenome; unknown 3741 3669 - Val CAC [ENA]
>WENV170617046 FUWD012911684 [FUWD] metagenome; unknown 179 107 - Val CAC [ENA]
>WENV170617244 FUWD012918844 [FUWD] metagenome; unknown 454 526 + Val CAC [ENA]
>WENV170617247 FUWD012918845 [FUWD] metagenome; unknown 130 202 + Val CAC [ENA]
>WENV170624813 FUWD013187197 [FUWD] metagenome; unknown 595 523 - Val CAC [ENA]
>WENV170633086 FUWD013391135 [FUWD] metagenome; unknown 595 523 - Val CAC [ENA]
>SRA1026841 SRR035086.5875 454 Sequencing (SRP001807) 123 51 - Val CAC [SRA]
>SRA1026855 SRR035086.11226 454 Sequencing (SRP001807) 216 144 - Val CAC [SRA]
>SRA1026875 SRR035086.18589 454 Sequencing (SRP001807) 139 211 + Val CAC [SRA]
>SRA1026898 SRR035086.24079 454 Sequencing (SRP001807) 195 267 + Val CAC [SRA]
>SRA1026978 SRR035086.37384 454 Sequencing (SRP001807) 122 50 - Val CAC [SRA]
>SRA1026993 SRR035086.39304 454 Sequencing (SRP001807) 239 167 - Val CAC [SRA]
>SRA1027011 SRR035086.43679 454 Sequencing (SRP001807) 526 454 - Val CAC [SRA]
>SRA1027024 SRR035086.46025 454 Sequencing (SRP001807) 416 344 - Val CAC [SRA]
>SRA1027109 SRR035086.63727 454 Sequencing (SRP001807) 195 123 - Val CAC [SRA]
>SRA1027113 SRR035086.64441 454 Sequencing (SRP001807) 430 358 - Val CAC [SRA]
>SRA1027125 SRR035086.67544 454 Sequencing (SRP001807) 381 453 + Val CAC [SRA]
>SRA1027132 SRR035086.68588 454 Sequencing (SRP001807) 216 144 - Val CAC [SRA]
>SRA1027188 SRR035086.77289 454 Sequencing (SRP001807) 207 135 - Val CAC [SRA]
>SRA1027189 SRR035086.77366 454 Sequencing (SRP001807) 218 290 + Val CAC [SRA]
>SRA1027211 SRR035086.82477 454 Sequencing (SRP001807) 286 358 + Val CAC [SRA]
>SRA1027246 SRR035086.89969 454 Sequencing (SRP001807) 200 272 + Val CAC [SRA]
>SRA1027309 SRR035086.104494 454 Sequencing (SRP001807) 352 424 + Val CAC [SRA]
>SRA1027322 SRR035086.106739 454 Sequencing (SRP001807) 218 290 + Val CAC [SRA]
>SRA1027386 SRR035086.116253 454 Sequencing (SRP001807) 145 217 + Val CAC [SRA]
>SRA1027461 SRR035086.127872 454 Sequencing (SRP001807) 256 184 - Val CAC [SRA]
>SRA1027583 SRR035086.151354 454 Sequencing (SRP001807) 464 536 + Val CAC [SRA]
>SRA1027604 SRR035086.158360 454 Sequencing (SRP001807) 311 239 - Val CAC [SRA]
>SRA1027606 SRR035086.159097 454 Sequencing (SRP001807) 219 291 + Val CAC [SRA]
>SRA1027688 SRR035086.173193 454 Sequencing (SRP001807) 127 199 + Val CAC [SRA]
>SRA1027700 SRR035086.176712 454 Sequencing (SRP001807) 207 135 - Val CAC [SRA]
>SRA1027816 SRR035086.200161 454 Sequencing (SRP001807) 144 72 - Val CAC [SRA]
>SRA1027819 SRR035086.200174 454 Sequencing (SRP001807) 194 122 - Val CAC [SRA]
>SRA1027848 SRR035086.206584 454 Sequencing (SRP001807) 332 404 + Val CAC [SRA]
>SRA1027906 SRR035086.216428 454 Sequencing (SRP001807) 218 290 + Val CAC [SRA]
>SRA1027942 SRR035086.223217 454 Sequencing (SRP001807) 216 144 - Val CAC [SRA]
>SRA1028037 SRR035086.245015 454 Sequencing (SRP001807) 247 175 - Val CAC [SRA]
>SRA1028072 SRR035086.252676 454 Sequencing (SRP001807) 347 275 - Val CAC [SRA]
>SRA1028101 SRR035086.258944 454 Sequencing (SRP001807) 126 54 - Val CAC [SRA]
>SRA1028145 SRR035086.266929 454 Sequencing (SRP001807) 221 293 + Val CAC [SRA]
>SRA1028199 SRR035086.274488 454 Sequencing (SRP001807) 235 307 + Val CAC [SRA]
>SRA1028410 SRR035086.320669 454 Sequencing (SRP001807) 210 282 + Val CAC [SRA]
>SRA1028494 SRR035086.339947 454 Sequencing (SRP001807) 241 169 - Val CAC [SRA]
>SRA1028518 SRR035086.344654 454 Sequencing (SRP001807) 158 86 - Val CAC [SRA]
>SRA1028522 SRR035086.347114 454 Sequencing (SRP001807) 127 199 + Val CAC [SRA]
>SRA1028558 SRR035086.357080 454 Sequencing (SRP001807) 171 99 - Val CAC [SRA]
>SRA1028602 SRR035086.370969 454 Sequencing (SRP001807) 288 216 - Val CAC [SRA]
>SRA1048348 SRR035094.152677 454 Sequencing (SRP001815) 373 301 - Val CAC [SRA]
>SRA1050849 SRR035096.31650 454 Sequencing (SRP001817) 294 222 - Val CAC [SRA]
>SRA1050859 SRR035096.33692 454 Sequencing (SRP001817) 359 287 - Val CAC [SRA]
>SRA1050991 SRR035096.67070 454 Sequencing (SRP001817) 281 353 + Val CAC [SRA]
>SRA1051003 SRR035096.68257 454 Sequencing (SRP001817) 125 53 - Val CAC [SRA]
>SRA1051019 SRR035096.69983 454 Sequencing (SRP001817) 330 402 + Val CAC [SRA]
>SRA1051046 SRR035096.75217 454 Sequencing (SRP001817) 330 402 + Val CAC [SRA]
>SRA1051097 SRR035096.84649 454 Sequencing (SRP001817) 188 116 - Val CAC [SRA]
>SRA1051146 SRR035096.94710 454 Sequencing (SRP001817) 127 55 - Val CAC [SRA]
>SRA1051170 SRR035096.101185 454 Sequencing (SRP001817) 63 135 + Val CAC [SRA]
>SRA1051255 SRR035096.121229 454 Sequencing (SRP001817) 295 223 - Val CAC [SRA]
>SRA1051278 SRR035096.127483 454 Sequencing (SRP001817) 145 73 - Val CAC [SRA]
>SRA1051311 SRR035096.135275 454 Sequencing (SRP001817) 219 291 + Val CAC [SRA]
>WENV074520 AACY023980842 Marine microbial communities from Global Ocean Sampling (GOS) 467 392 - Val CAC [ENA]
Identical group No.593613 (2 seq.)
>SRA1026866 SRR035086.15660 454 Sequencing (SRP001807) 122 194 + Val CAC [SRA]
>SRA1026894 SRR035086.22878 454 Sequencing (SRP001807) 123 195 + Val CAC [SRA]
Identical group No.593642 (1 seq.)
>SRA1028042 SRR035086.245923 454 Sequencing (SRP001807) 418 346 - Val CAC [SRA]
Identical group No.654430 (42 seq.)
>C171072605 CP018091 Cyanobacteriota Synechococcus sp. SynAce01 [CP018091] 618408 618337 - Val CAC -
>C171128286 LT578417 Cyanobacteriota Cyanobium sp. NIES-981 [LT578417] 1173528 1173599 + Val CAC -
>C025240 CT978603 Cyanobacteriota Synechococcus sp. RCC307 [CT978603] 634416 634345 - Val CAC [Ensembl]
>w013577 AANO01000005 Cyanobacteriota Synechococcus sp. WH 5701 [AANO] 9844 9770 - Val CAC [ENA]
>WENV180357680 OBNN01063782 [OBNN] marine metagenome; Coastal water 51 122 + Val CAC [ENA]
>WENV180363831 OBNZ01010859 [OBNZ] marine metagenome; ENVO:00002010 368 297 - Val CAC [ENA]
>WENV180377551 OBON01043277 [OBON] marine metagenome; sea water 237 166 - Val CAC [ENA]
>WENV181367877 OFQD01003427 [OFQD] freshwater metagenome; Freshwater Lake 602 674 + Val CAC [ENA]
>WENV181384875 OFRI01017953 [OFRI] wastewater metagenome; Exp Tend VB 90WW 316 387 + Val CAC [ENA]
>W08011025 ABSE01000010 Cyanobacteriota Cyanobium sp. PCC 7001 [ABSE] 344265 344336 + Val CAC [ENA]
>WENV170119642 CENJ01157259 [CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 351 425 + Val CAC [ENA]
>WENV170133902 CENU01060923 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3230 3156 - Val CAC [ENA]
>WENV170615013 FUWD012846323 [FUWD] metagenome; unknown 478 407 - Val CAC [ENA]
>WENV170622365 FUWD013099940 [FUWD] metagenome; unknown 690 761 + Val CAC [ENA]
>WENV170630583 FUWD013314372 [FUWD] metagenome; unknown 690 761 + Val CAC [ENA]
>WENV170769480 LXNH01056003 [LXNH] seawater metagenome; marine seawater 604 678 + Val CAC [ENA]
>WENV170808645 MDSW01118763 [MDSW] marine metagenome; seawater 2482 2410 - Val CAC [ENA]
>WENV021828 AACY020600387 Marine microbial communities from Global Ocean Sampling (GOS) 185 111 - Val CAC [ENA]
>W141712583 JMRP01000038 Cyanobacteriota Cyanobium sp. CACIAM 14 [JMRP] 26686 26615 - Val CAC [ENA]
>W1911176856 NQKW01000002 Cyanobacteriota Synechococcus sp. 1G10 [NQKW] 213670 213599 - Val CAC [ENA]
>W1911176943 NQKY01000004 Cyanobacteriota Synechococcus sp. BO 8801 [NQKY] 150227 150298 + Val CAC [ENA]
>W1911176990 NQKZ01000004 Cyanobacteriota Synechococcus sp. 8F6 [NQKZ] 79421 79350 - Val CAC [ENA]
>W1911177023 NQLA01000003 Cyanobacteriota Vulcanococcus limneticus LL [NQLA] 113848 113919 + Val CAC [ENA]
>W1911638485 PVWP01000003 Cyanobacteriota Aphanothece minutissima minutissima CCALA 015 [PVWP] 236206 236135 - Val CAC [ENA]
>W1810389433 PXXO01000001 Cyanobacteriota Cyanobium usitatum str. Tous [PXXO] 92960 92889 - Val CAC [ENA]
>SRA1027257 SRR035086.91354 454 Sequencing (SRP001807) 137 208 + Val CAC [SRA]
>SRA1027828 SRR035086.202430 454 Sequencing (SRP001807) 168 239 + Val CAC [SRA]
>SRA1027888 SRR035086.212635 454 Sequencing (SRP001807) 137 208 + Val CAC [SRA]
>SRA1029339 SRR035087.111440 454 Sequencing (SRP001808) 29 100 + Val CAC [SRA]
>SRA1034294 SRR035089.51207 454 Sequencing (SRP001810) 267 338 + Val CAC [SRA]
>SRA1051673 SRR035098.56187 454 Sequencing (SRP001819) 87 16 - Val CAC [SRA]
>SRA1052298 SRR035098.177103 454 Sequencing (SRP001819) 116 187 + Val CAC [SRA]
>SRA1052325 SRR035098.182994 454 Sequencing (SRP001819) 207 136 - Val CAC [SRA]
>SRA1052854 SRR035098.285965 454 Sequencing (SRP001819) 261 190 - Val CAC [SRA]
>SRA1053533 SRR035098.429890 454 Sequencing (SRP001819) 90 19 - Val CAC [SRA]
>SRA1053683 SRR035098.467685 454 Sequencing (SRP001819) 90 19 - Val CAC [SRA]
>W10120599 ADXM01000068 Cyanobacteriota Synechococcus sp. CB0205 [ADXM] 31632 31704 + Val CAC [ENA]
>W11127343 ADXM01000068 Cyanobacteriota Synechococcus sp. CB0205 [ADXM] 31632 31704 + Val CAC [ENA]
>W1511679496 LFEK01000110 Cyanobacteriota Synechococcus sp. GFB01 [LFEK] 56817 56888 + Val CAC [ENA]
>C131003914 CP003495 Cyanobacteriota Cyanobium gracile PCC 6307 [CP003495] 3155925 3155854 - Val CAC [Ensembl]
>W1610626659 LICO01000147 Cyanobacteriota cyanobacterium BACL30 MAG-120619-bin27 [LICO] 381 452 + Val CAC [ENA]
>W1710757786 LICO01000147 Cyanobacteriota cyanobacterium BACL30 MAG-120619-bin27 [LICO] 381 452 + Val CAC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK